CN192068

Overview
NameCN192068
Unique NameCN192068
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length700
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN192068 vs. ExPASy Swiss-Prot
Match: C80A1_BERST (Berbamunine synthase OS=Berberis stolonifera GN=CYP80A1 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.642e-15
Identity = 51/226 (22.57%), Postives = 112/226 (49.56%), Query Frame = 2
Query:   44 ILWLVFTLVCAMALSSISRGRRKQLPPGPRPYPVIGNLLELGGKPHKS----LAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDENCRMGKAIDFGQAAFNTSLNLLSNTIFSIDVVDPSERE----FKDTVWGIMEEAGKPNLSDHFPLL 697
            I+  V   + A+    + + +   LPP P  +P++G+L +L  K        ++ +A+ +GP++ L+ G  +++  S+   A  +L+ +D     R+        P  H ++S++W   +  WK  RK+ +  IF+ + L A +  R +   +L+ ++    ++G  ++     F  +LN+L + +FS DV + S++         + G++   G  +++ +FP+L
Sbjct:    4 IVGFVSISLVALLYFLLFKPKHTNLPPSPPAWPIVGHLPDLISKNSPPFLDYMSNIAQKYGPLIHLKFGLHSSIFASTKEAAMEVLQTNDKVLSGRQPLPCFRIKP--HIDYSILWSDSNSYWKKGRKILHTEIFSQKMLQAQEKNRERVAGNLVNFI--MTKVGDVVELRSWLFGCALNVLGHVVFSKDVFEYSDQSDEVGMDKLIHGMLMTGGDFDVASYFPVL 225          
BLAST of CN192068 vs. ExPASy Swiss-Prot
Match: C71B7_ARATH (Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CYP71B7 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.642e-15
Identity = 53/194 (27.32%), Postives = 90/194 (46.39%), Query Frame = 2
Query:   23 MDLFISCILWLVFTLVCAMALSSISRGRRKQLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDENCRMGKAIDFGQAAFNTSLNLLSNTIFSIDV 604
            M + +  +  L   LV    LS   +  + +LPPGP+  P+IGNL  L G PH     L++  GP+M L  G V  VV+SS   A+  LK  D     R  PE V +    +    + + P    WK LRKL  M +  ++K  + + +R ++   L+  + E+      ++  +  F    +++    F +++
Sbjct:    1 MSILLCFLCLLPVFLVSLSILSKRLKPSKWKLPPGPKTLPIIGNLHNLTGLPHTCFRNLSQKFGPVMLLHFGFVPVVVISSKEGAEEALKTQDLECCSR--PETVATRMISYNFKDIGFAPYGEEWKALRKLVVMELLNTKKFQSFRYIREEENDLLIKKLTESALKKSPVNLKKTLFTLVASIVCRLAFGVNI 192          
BLAST of CN192068 vs. ExPASy Swiss-Prot
Match: C71B5_ARATH (Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CYP71B5 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.259e-14
Identity = 58/179 (32.40%), Postives = 90/179 (50.28%), Query Frame = 2
Query:   23 MDLFISCILWLVFTLVCAMALSSISRGRRKQLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKL--------DANQDLRRKKIKDLLAYVDENCRMGKAI 535
            M +F+  +L L  +L+    L   S+G+   LPPGP+  P+IGNL + G   HKSL K+++ +GP+M L  G V  ++VSS   A+ +LK HD     R  P+ V S    +    + + P    W+ +RK+    +F+ +KL        D +Q L RK  K  L     +  + K I
Sbjct:    1 MSIFLCFLLLLPLSLIFLKKLLP-SKGK---LPPGPKGLPIIGNLHQFGRFLHKSLHKISQEYGPVMLLHFGVVPVIIVSSKEGAEEVLKTHDLETCSR--PKTVGSGLFTYNFKDIGFAPYGENWREMRKIAVSELFSQKKLKSFRYIREDESQLLVRKVSKSALETPTSSVNLRKVI 173          
BLAST of CN192068 vs. ExPASy Swiss-Prot
Match: C71C4_MAIZE (Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.645e-14
Identity = 58/199 (29.15%), Postives = 99/199 (49.75%), Query Frame = 2
Query:  116 LPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGP-IMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDENCRMGKAIDFGQAAFNTSLNLLSNTIFSIDVVDPSE----REFKDTVWGIMEEAGKPNLSDHFPLL 697
            LP  P   P+IG+L  +G  P+ SLA LA  +GP +M LRLG V TVVVSSP +A+A+L+ +D  F  R  P +++S    +      + P    ++  RKL  +H+  + K+ + +  R ++++  L  V       + +D  +   +   NL+   +     ++       RE  D   G++   G  ++ D+FP L
Sbjct:   68 LPSPPMKLPIIGHLHLMGDIPYVSLAALATRYGPDLMLLRLGAVPTVVVSSPRVAEAVLRTYDHVFSSR--PRSLVSDIIMYGATDSCFAPYGDHFRKARKLVTVHLLNASKVRSQRPAREEEVRGALDRVRRAAAAREPVDMSELLHSFVNNLVCRAVSGKFSMEEGRNRLFRELTDINAGLL---GGFHIQDYFPRL 261          
BLAST of CN192068 vs. ExPASy Swiss-Prot
Match: C71BU_ARATH (Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=CYP71B31 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.148e-14
Identity = 53/186 (28.49%), Postives = 90/186 (48.39%), Query Frame = 2
Query:   35 ISCILWLVFTLVCAMALSSISRGRRKQLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDENCRMGKAIDFGQAAFNTSLNLLSNTIF 592
            +S  L L+F       L       RK+LPPGP   P+IGNL +LG   H SL KL+  HGP+M +R G V   V SS   AK +LK HD    +R  P+ V +    H    + +      W+ ++K   + +F+ +K  + + +R ++   L+  +    +    +D  ++ F+ + +++    F
Sbjct:    1 MSMFLGLLFLFPLFFILFKNLLPPRKKLPPGPTGLPLIGNLHQLGRLLHSSLHKLSLEHGPVMLVRWGVVPMAVFSSNEAAKEVLKTHDLETCNR--PKLVANGLFTHGYKDIGFTQYGEEWREMKKFVGLELFSPKKHKSFRYIREEEGDLLVKKISNYAQTQTLVDLRKSLFSYTASIIFREAF 184          
BLAST of CN192068 vs. ExPASy Swiss-Prot
Match: C71BJ_ARATH (Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=CYP71B19 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.148e-14
Identity = 60/227 (26.43%), Postives = 104/227 (45.81%), Query Frame = 2
Query:   35 ISCILWLVFTLVCAMALSSISRGRRKQLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEH--DSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDENCRMGKAIDFGQAAFNTSLNL-----LSNTIFSIDVVDPSEREFKDTVWGIMEEAGKPNLSDHFPL 694
            IS +   + T V  +  +   +  +  LPP P  +PVIGNL ++G  PH+SL  LA+ +GP+M L  G V   VVSS   A+ +L+ H  D   R + V   +LS   +   F+    P    WK  RK     +F  +K+ + + +R ++   L+  + E+      +D  ++ F  + ++     L       D +D  + + ++ V+           SD FP+
Sbjct:    3 ISFLCVFLITFVSLIFFAKKIKRSKWNLPPSPPKFPVIGNLHQIGELPHRSLQHLAERYGPVMLLHFGFVPITVVSSREAAEEVLRTHDLDCCSRPKLVGTRLLSRDFKDIGFT----PYGNEWKARRKFALRELFCLKKVQSFRHIREEECNFLVKQLSESAVDRSPVDLSKSLFWLTASILFRVALGQNFHESDFID--KEKIEELVFEAETALASFTCSDFFPV 223          
BLAST of CN192068 vs. ExPASy Swiss-Prot
Match: C71BK_ARATH (Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=CYP71B20 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.805e-14
Identity = 50/174 (28.74%), Postives = 85/174 (48.85%), Query Frame = 2
Query:   35 ISCILWLVFTLVCAMALSSISRGRRKQLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDENCRMGKAIDFGQAAF 556
            IS + + + TL   +  +   +  +  LPP P  +PVIGNL ++G  PH+SL  LA+ +GP+M L  G V   VVSS   A+ +L+ HD     R  P+ V +         + + P    WK  RK     +F  +K+ + + +R ++   L+  + E+      +D  ++ F
Sbjct:    3 ISFLCFCLITLASLIFFAKKIKHLKWNLPPSPPKFPVIGNLHQIGELPHRSLQHLAERYGPVMLLHFGFVPVTVVSSREAAEEVLRTHDLDCCSR--PKLVGTRLLSRNFKDVCFTPYGNEWKARRKFALRELFCLKKVQSFRHIREEECNFLVKQLSESAVNRSPVDLSKSLF 174          
BLAST of CN192068 vs. ExPASy Swiss-Prot
Match: C71BP_ARATH (Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=CYP71B25 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.664e-14
Identity = 60/230 (26.09%), Postives = 105/230 (45.65%), Query Frame = 2
Query:   23 MDLFISCILWLVFTLVCAMALSSISRGRRKQLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDENCRMGKAIDFGQAAFNTSLNLLSNTIFSIDVVDP---SEREFKDTVWGIMEEAGKP---NLSDHFPL 694
            M +  S +L L    +  +  +   +  ++ LPPGP   P++GNL +L G  H+ L +L+K HGP+M L+LG V  V++SS   A+  LK HD     R    A       +    L     S  W+ LRK+     F+ +K+ + + +R ++   ++  + +       +D  +  F  + + +   +F     D    SE + ++ V+    EA K      SD FP+
Sbjct:    1 MAILQSFLLLLSLPFLFTLIYTKKMKESKRNLPPGPAKLPIVGNLHQLQGMVHRCLHELSKKHGPVMHLQLGFVPLVLISSSEAAEEALKTHDIECCTRPNTNAARVFSRNNKNIGLG--AYSDEWRELRKVAVREYFSVKKVQSFRYVREEENHLMVKKLRDLALKQSPVDLSKTLFCLAASTVFRPVFGQSFSDNKHFSEEKIEELVF----EAQKSLTFKFSDLFPI 224          
BLAST of CN192068 vs. ExPASy Swiss-Prot
Match: C71BO_ARATH (Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=CYP71B24 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.664e-14
Identity = 58/215 (26.98%), Postives = 99/215 (46.05%), Query Frame = 2
Query:   53 LVFTLVCAMALSSISRGRRKQLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSFRDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQKLDANQDLRRKKIKDLLAYVDENCRMGKAIDFGQAAFNTSLNLLSNTIFS--IDVVDPSEREFKDTVWGIMEEAGKPNLSDHFP 691
            L F  + ++ +    +   + LPP P   PVIGNL +L G  HK L  L+K HGP++ LRLG +  VV+SS   A+  LK HD     R +      L     +  L   P     + LRKL  +  F++ K+ + + +R ++   ++  + E      ++D  Q  F    +++  + F    D  +    E  + +   +++ G  + SD FP
Sbjct:    5 LYFIALLSLIIIKKIKDSNRNLPPSPLKLPVIGNLYQLRGLFHKCLHDLSKKHGPVLLLRLGFLDMVVISSTEAAEEALKVHDLECCTRPITNVTSKLWRDGQDIGLA--PYGESLRELRKLSFLKFFSTTKVRSFRYIREEENDLMVKKLKEAALKKSSVDLSQTLFGLVGSIIFRSAFGQRFDEGNHVNAEKIEDLMFEVQKLGALSNSDLFP 217          
BLAST of CN192068 vs. ExPASy Swiss-Prot
Match: TCMO_GLYEC (Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza echinata GN=CYP73A14 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.785e-14
Identity = 52/146 (35.62%), Postives = 79/146 (54.11%), Query Frame = 2
Query:   23 MDLFI--SCILWLVFTLVCAMALSSISRGRRKQLPPGPRPYPVIGNLLELGGK-PHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILKEHDSSF--RDRKVPEAVLSLPNRHPEFSLVWLPVSPLWKNLRKLCNMHIFTSQ 445
            MDL +    +L L    + A+A+S + RGRR +LPPGP P P+ GN L++G    H++L  LAK  G I  LR+GQ   VVVSSP +AK +L      F  R R V   + +   +     +V+      W+ +R++  +  FT++
Sbjct:    1 MDLLLLEKTLLGLFIAAITAIAISKL-RGRRFKLPPGPIPVPIFGNWLQVGDDLNHRNLTDLAKRFGDIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQ----DMVFTVYGEHWRKMRRIMTVPFFTNK 141          
The following BLAST results are available for this feature:
BLAST of CN192068 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 126
Match NameE-valueIdentityDescription
C80A1_BERST9.642e-1522.57Berbamunine synthase OS=Berberis stolonifera GN=CY... [more]
C71B7_ARATH9.642e-1527.32Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CY... [more]
C71B5_ARATH1.259e-1432.40Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CY... [more]
C71C4_MAIZE1.645e-1429.15Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 S... [more]
C71BU_ARATH2.148e-1428.49Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=C... [more]
C71BJ_ARATH2.148e-1426.43Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=C... [more]
C71BK_ARATH2.805e-1428.74Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=C... [more]
C71BP_ARATH3.664e-1426.09Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=C... [more]
C71BO_ARATH3.664e-1426.98Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=C... [more]
TCMO_GLYEC4.785e-1435.62Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza ech... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS06_0006E19_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006E19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192068 ID=CN192068; Name=CN192068; organism=Citrus sinensis; type=EST; length=700bp
GAGGCTTAAAGTAAGCTCAAAGATGGATTTGTTCATTAGCTGTATACTAT
GGCTTGTATTCACATTGGTTTGCGCGATGGCTTTAAGTTCCATTTCTAGA
GGAAGACGCAAACAGCTTCCACCGGGACCGAGGCCATATCCGGTGATCGG
AAACCTCCTGGAGCTGGGTGGTAAACCTCACAAGTCACTGGCCAAGCTTG
CCAAGATTCATGGCCCCATAATGAGTCTAAGACTTGGCCAGGTGACCACA
GTAGTGGTTTCTTCTCCAAGCATGGCTAAAGCTATACTTAAAGAACATGA
TTCATCATTCAGAGATCGAAAGGTCCCTGAAGCAGTCTTGTCCCTGCCTA
ACCGGCACCCTGAATTCAGCTTGGTCTGGCTGCCAGTCTCACCACTATGG
AAAAATCTTCGAAAACTATGCAACATGCATATTTTCACTAGTCAGAAACT
CGATGCCAATCAAGACCTCCGACGCAAGAAAATCAAAGACCTTCTTGCTT
ATGTTGATGAAAATTGCCGTATGGGCAAAGCAATAGATTTTGGCCAAGCT
GCTTTTAATACTTCACTTAATTTGTTATCCAACACGATTTTTTCTATTGA
TGTCGTTGATCCCAGTGAGCGAGAGTTTAAGGATACAGTTTGGGGTATCA
TGGAAGAGGCAGGAAAGCCTAACTTGTCCGACCATTTTCCTCTACTAAAA
back to top