CN192067

Overview
NameCN192067
Unique NameCN192067
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length683
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN192067 vs. ExPASy Swiss-Prot
Match: C85A_PHAVU (Cytochrome P450 85A OS=Phaseolus vulgaris GN=BA13 PE=3 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 9.479e-12
Identity = 44/135 (32.59%), Postives = 76/135 (56.30%), Query Frame = -1
Query:  267 NPIEESDITRLPYLQAVVKETFRLHPAVPLLIARKVSEDVEIASFTVPKGGQVFVNVWAIGRDENIWDNPHSFVPERFLGSDISYKGQNFELIPFGGGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDGNMDME 671
            +PI+ +D+  + + +AV+ ET RL   V  ++ RK + D+E+  + +PKG +++V    I  D  ++ +P +F P R+LG+  S + Q+  LI FGGG R CPG  L I  +   L   +  + W+   G+  M+
Sbjct:  317 DPIDCNDLKSMRFTRAVIFETSRLATIVNGVL-RKTTHDMELNGYLIPKGWRIYVYTREINYDPFLYHDPLTFNPWRWLGN--SLESQSHFLI-FGGGTRQCPGKELGIAEISTFLHYFVTRYRWEEVGGDKLMK 447          
BLAST of CN192067 vs. ExPASy Swiss-Prot
Match: C554A_DICDI (Probable cytochrome P450 554A1 OS=Dictyostelium discoideum GN=cyp554a1 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.479e-12
Identity = 39/123 (31.71%), Postives = 66/123 (53.66%), Query Frame = -1
Query:  303 IEESDITRLPYLQAVVKETFRLHPAVPLLIARKVSEDVEIAS--FTVPKGGQVFVNVWAIGRDENIWDNPHSFVPERFLGSDISYKGQNFELIPFGGGRRICPGLPLAIRMLHLMLGSLINSF 665
            I  +D    P+L + +KET RL+P  PL + RK   ++ I    + +P    + ++V     DEN + +P+ F P+RFL S +S      + + FG G R C G  +A+  +H+ L +LI ++
Sbjct:  353 ITANDKINTPFLNSFIKETNRLYPIAPLSLPRKSINEMIIGDNKYYIPANTNILMDVKGFSLDENNYKDPNEFKPDRFLNSKVS------DTLNFGIGPRNCIGQTIAMNQIHIFLSNLILNY 469          
BLAST of CN192067 vs. ExPASy Swiss-Prot
Match: C4AC2_DROME (Probable cytochrome P450 4ac2 OS=Drosophila melanogaster GN=Cyp4ac2 PE=3 SV=3)

HSP 1 Score: 70.4774 bits (171), Expect = 9.479e-12
Identity = 41/127 (32.28%), Postives = 68/127 (53.54%), Query Frame = -1
Query:  303 PIEESDIT-----RLPYLQAVVKETFRLHPAVPLLIARKVSEDVEIASFTVPKGGQVFVNVWAIGRDENIWDNPHSFVPERFLGSDISYKGQNFELIPFGGGRRICPGLPLAIRMLHLMLGSLINSF 668
            P +  DI+      L Y++ V+KE+ RL P+VP +  R V E V +    +PK  Q+ ++++ I RD   + NP  F P+RF   + +     F  +PF  G+R C G   AI  + ++L ++I +F
Sbjct:  338 PDDSDDISVFQFNELVYMECVIKESLRLFPSVPFIGRRCVEEGV-VNGLIMPKNTQINIHLYEIMRDARHFSNPKMFQPDRFFPEN-TVNRHPFAFVPFSAGQRNCIGQKFAILEIKVLLAAVIRNF 462          
BLAST of CN192067 vs. ExPASy Swiss-Prot
Match: C16B1_PICSI (Cytochrome P450 716B1 OS=Picea sitchensis GN=CYP716B1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.479e-12
Identity = 40/128 (31.25%), Postives = 63/128 (49.22%), Query Frame = -1
Query:  291 GNPIEESDITRLPYLQAVVKETFRLHPAVPLLIARKVSEDVEIASFTVPKGGQVFVNVWAIGRDENIWDNPHSFVPERFLGSDISYKGQNFELIPFGGGRRICPGLPLAIRMLHLMLGSLINSFDWKL 674
            G  +E  D+ R+ Y   V +E  RL PAV     + + E +    FT+PKG ++   V +  +    + NP  F P RF G         +  +PFGGG R+CPG   A   + + L +++ +F+W L
Sbjct:  344 GQLLEWEDLQRMKYSWRVAQEALRLFPAVQGSFRKAIKEFI-YDGFTIPKGWKLHWTVNSTHQKSEYFSNPEKFDPSRFEGEG----PPPYTFVPFGGGPRMCPGNEFARMEILIFLHNIVKNFNWNL 466          
BLAST of CN192067 vs. ExPASy Swiss-Prot
Match: CP2C8_HUMAN (Cytochrome P450 2C8 OS=Homo sapiens GN=CYP2C8 PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.238e-11
Identity = 40/133 (30.08%), Postives = 68/133 (51.13%), Query Frame = -1
Query:  285 VGRGNPIEESDITRLPYLQAVVKETFRLHPAVPLLIARKVSEDVEIASFTVPKGGQVFVNVWAIGRDENIWDNPHSFVPERFLGSDISYKGQNFELIPFGGGRRICPGLPLAIRMLHLMLGSLINSFDWKLED 683
            +GR       D + +PY  AVV E  R    VP  +   V+ D +  ++ +PKG  +   + ++  D+  + NP+ F P  FL  + ++K  ++  +PF  G+RIC G  LA   L L L +++ +F+ K  D
Sbjct:  331 IGRHRSPCMQDRSHMPYTDAVVHEIQRYSDLVPTGVPHAVTTDTKFRNYLIPKGTTIMALLTSVLHDDKEFPNPNIFDPGHFLDKNGNFKKSDY-FMPFSAGKRICAGEGLARMELFLFLTTILQNFNLKSVD 462          
BLAST of CN192067 vs. ExPASy Swiss-Prot
Match: CP2A2_RAT (Cytochrome P450 2A2 OS=Rattus norvegicus GN=Cyp2a2 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.238e-11
Identity = 42/140 (30.00%), Postives = 68/140 (48.57%), Query Frame = -1
Query:  264 VGRGNPIEESDITRLPYLQAVVKETFRLHPAVPLLIARKVSEDVEIASFTVPKGGQVFVNVWAIGRDENIWDNPHSFVPERFLGSDISYKGQNFELIPFGGGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDGNMDMEE 683
            +GR    +  D  ++PY QAV+ E  R     PL I R++ ++     F +PKG  VF  + ++  +   + N   F P+ FL  D     +N   +PF  G+R C G  LA   L L+L +++ +F +K      D+ E
Sbjct:  333 IGRNRQPQYEDHMKMPYTQAVINEIQRFSNLAPLGIPRRIIKNTTFRGFFLPKGTDVFPIIGSLMTEPKFFPNHKDFNPQHFL-DDKGQLKKNAAFLPFSIGKRFCLGDSLAKMELFLLLTTILQNFRFKFPMNLEDINE 471          
BLAST of CN192067 vs. ExPASy Swiss-Prot
Match: CP237_MOUSE (Cytochrome P450 2C37 OS=Mus musculus GN=Cyp2c37 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.238e-11
Identity = 38/120 (31.67%), Postives = 65/120 (54.17%), Query Frame = -1
Query:  294 DITRLPYLQAVVKETFRLHPAVPLLIARKVSEDVEIASFTVPKGGQVFVNVWAIGRDENIWDNPHSFVPERFLGSDISYKGQNFELIPFGGGRRICPGLPLAIRMLHLMLGSLINSFDWK 653
            D +R+PY  A++ E  R    +P  +  +V+ D++  ++ +PKG  V  ++ ++  D   + NP  F P  FL  +  +K  ++  +PF  G+RIC G  LA   L L L S++ SF+ K
Sbjct:  341 DRSRMPYTDAMIHEVQRFIDLIPNSLPHEVTCDIKFRNYFIPKGTTVITSLSSVLHDSTEFPNPEVFDPGHFLDGNGKFKKSDY-FMPFSTGKRICAGEGLARMELFLFLTSILQSFNLK 459          
BLAST of CN192067 vs. ExPASy Swiss-Prot
Match: C4AC3_DROME (Probable cytochrome P450 4ac3 OS=Drosophila melanogaster GN=Cyp4ac3 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.238e-11
Identity = 40/140 (28.57%), Postives = 73/140 (52.14%), Query Frame = -1
Query:  222 LPYLQAVVKETFRLHPAVPLLIARKVSEDVEIASFTVPKGGQVFVNVWAIGRDENIWDNPHSFVPERFLGSDISYKGQNFELIPFGGGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDGNMDMEEKFGLTIQKAQPLRV 641
            L +L+ V+KE+ RL P+ P+ I R   E+  +    +PK  Q+ ++++ I RD   +  P+ F+PERFL  + S     F  +PF  G R C G    +  + ++L ++I +F         D+  + G+ ++  Q ++V
Sbjct:  365 LIHLECVIKESLRLFPSAPI-IGRTCIEESVMNGLVLPKNAQISIHIYDIMRDARHFPKPNQFLPERFLPEN-SVNRHPFAFVPFSAGPRNCIGQKFGVLEIKVLLAAVIRNFKLLPATQLEDLTFENGIVLRTQQNIKV 502          
BLAST of CN192067 vs. ExPASy Swiss-Prot
Match: C13A7_CAEEL (Putative cytochrome P450 CYP13A7 OS=Caenorhabditis elegans GN=cyp-13A7 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.238e-11
Identity = 35/120 (29.17%), Postives = 67/120 (55.83%), Query Frame = -1
Query:  294 ITRLPYLQAVVKETFRLHPAVPLLIARKVSEDVEIASFTVPKGGQVFVNVWAIGRDENIW-DNPHSFVPERFLGSDISYKGQNFELIPFGGGRRICPGLPLAIRMLHLMLGSLINSFDWK 650
            +++L YL+ VVKE  RL+P   L+  RK  +   +    +  G  + V+ W++  D  +W D+ + F PER+   D  +  +    +PFG G RIC G+ LA+  + ++L +++ ++ ++
Sbjct:  370 LSKLKYLECVVKEALRLYPLASLVHNRKCLKTTNVLGMEIEAGTNINVDTWSLHHDPKVWGDDVNEFKPERWESGDELFFAKG-GYLPFGMGPRICIGMRLAMMEMKMLLTNILKNYTFE 488          
BLAST of CN192067 vs. ExPASy Swiss-Prot
Match: C11B1_BOVIN (Cytochrome P450 11B1, mitochondrial OS=Bos taurus GN=CYP11B1 PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.238e-11
Identity = 47/132 (35.61%), Postives = 75/132 (56.82%), Query Frame = -1
Query:  258 ITRLPYLQAVVKETFRLHPAVPLLIARKVSEDVEIASFTVPKGGQVFVNVWAIGRDENIWDNPHSFVPERFLGSDISYKGQNFELIPFGGGRRICPGLPLA-IRMLHLMLGSLINSFDWKLEDGNMDMEEKF 650
            IT LP L+A +KET RL+P V + + R+VS D+ + ++ +P G  V V ++++GR+  ++  P S+ P+R+L  D    G  F  + FG G R C G  +A + ML L+   L N     LE  ++ M  +F
Sbjct:  359 ITELPLLRAALKETLRLYP-VGITLEREVSSDLVLQNYHIPAGTLVKVLLYSLGRNPAVFARPESYHPQRWL--DRQGSGSRFPHLAFGFGVRQCLGRRVAEVEMLLLLHHVLKNFLVETLEQEDIKMVYRF 487          
The following BLAST results are available for this feature:
BLAST of CN192067 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 424
Match NameE-valueIdentityDescription
C85A_PHAVU9.479e-1232.59Cytochrome P450 85A OS=Phaseolus vulgaris GN=BA13 ... [more]
C554A_DICDI9.479e-1231.71Probable cytochrome P450 554A1 OS=Dictyostelium di... [more]
C4AC2_DROME9.479e-1232.28Probable cytochrome P450 4ac2 OS=Drosophila melano... [more]
C16B1_PICSI9.479e-1231.25Cytochrome P450 716B1 OS=Picea sitchensis GN=CYP71... [more]
CP2C8_HUMAN1.238e-1130.08Cytochrome P450 2C8 OS=Homo sapiens GN=CYP2C8 PE=1... [more]
CP2A2_RAT1.238e-1130.00Cytochrome P450 2A2 OS=Rattus norvegicus GN=Cyp2a2... [more]
CP237_MOUSE1.238e-1131.67Cytochrome P450 2C37 OS=Mus musculus GN=Cyp2c37 PE... [more]
C4AC3_DROME1.238e-1128.57Probable cytochrome P450 4ac3 OS=Drosophila melano... [more]
C13A7_CAEEL1.238e-1129.17Putative cytochrome P450 CYP13A7 OS=Caenorhabditis... [more]
C11B1_BOVIN1.238e-1135.61Cytochrome P450 11B1, mitochondrial OS=Bos taurus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0006E19_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006E19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192067 ID=CN192067; Name=CN192067; organism=Citrus sinensis; type=EST; length=683bp
TTTTTTGTTATCAAGTGTCACATATTTTTTGCTTACATATTGATCCACTC
ATAAATGTGGATTAAGGTGATCATTTAGATAATTGCTCATAAATAATAAG
AACAATGATAAACAACAATGATGAATAAATACTAACGACAAAGTGCTTTA
TTGGTTACAATTGAGTGCACTCCAACGGGATGGAAAATTAACTATACTGA
GGACTAAATGGCAACAGGGACAACACGAAGGGGTTGAGCCTTCTGTATAG
TGAGGCCAAATTTCTCTTCCATGTCCATGTTCCCATCTTCAAGCTTCCAA
TCAAAAGAATTAATAAGTGAACCGAGCATTAGATGTAACATTCTGATTGC
CAATGGCAAACCCGGACAAATGCGCCGCCCACCTCCGAAGGGAATTAGCT
CAAAATTTTGGCCTTTGTAAGAAATATCTGACCCCAAAAATCTTTCGGGT
ACAAAAGAGTGAGGATTGTCCCATATGTTTTCATCTCTACCAATAGCCCA
TACGTTAACAAAAACTTGCCCACCTTTCGGCACTGTGAAGCTTGCAATTT
CAACATCTTCAGAGACTTTGCGGGCGATTAATAAAGGAACTGCCGGGTGC
AACCTAAAAGTTTCTTTAACAACTGCTTGTAGATAAGGTAACCGAGTGAT
GTCAGATTCTTCAATTGGGTTGCCTCTGCCAAC
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