CN192067

Overview
NameCN192067
Unique NameCN192067
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length683
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN192067 vs. ExPASy Swiss-Prot
Match: CP3AV_MESAU (Cytochrome P450 3A31 OS=Mesocricetus auratus GN=CYP3A31 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.617e-11
Identity = 50/150 (33.33%), Postives = 72/150 (48.00%), Query Frame = -1
Query:  216 ITRLPYLQAVVKETFRLHPAVPLLIARKVSEDVEIASFTVPKGGQVFVNVWAIGRDENIWDNPHSFVPERFLGSDISYKG--QNFELIPFGGGRRICPGLPLAIRMLHLMLGSLINSFD---WKLEDGNMDMEEKFGLTIQKAQPLRVVP 650
            +  + YL  V+ ET RL+P +   + R   +DVE+    VPKG  V V V+A+  D   W  P  F PERF   +   KG    +  +PFG G R C G+  A+  + L L  ++ +F     K     M +  K  L  +K   L+VVP
Sbjct:  348 VMEMEYLDMVLNETLRLYP-IGSRLERVCKQDVEMDGVFVPKGSIVMVPVFALHYDPQYWPEPEKFRPERFSKEN---KGSIDPYIFLPFGNGPRNCIGMRFALMNMKLALTKVLQNFSLQPCKETQIPMKLSRKAMLQPEKPIILKVVP 493          
BLAST of CN192067 vs. ExPASy Swiss-Prot
Match: CP3A7_HUMAN (Cytochrome P450 3A7 OS=Homo sapiens GN=CYP3A7 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.617e-11
Identity = 45/146 (30.82%), Postives = 74/146 (50.68%), Query Frame = -1
Query:  228 ITRLPYLQAVVKETFRLHPAVPLLIARKVSEDVEIASFTVPKGGQVFVNVWAIGRDENIWDNPHSFVPERFLGSDISYKGQN----FELIPFGGGRRICPGLPLAIRMLHLMLGSLINSFDWK-LEDGNMDMEEKFGLTIQKAQPL 650
            + +L YL  VV ET RL P V + + R   +DVEI    +PKG  V +  + +  D   W  P  F+PERF     S K ++    +   PFG G R C G+  A+  + L L  ++ +F +K  ++  + ++ +FG  +   +P+
Sbjct:  350 VLQLEYLDMVVNETLRLFP-VAMRLERVCKKDVEINGMFIPKGVVVMIPSYVLHHDPKYWREPEKFLPERF-----SKKNKDNIDPYIYTPFGSGPRNCIGMRFALVNMKLALVRVLQNFSFKPCKETQIPLKLRFGGLLLTEKPI 489          
BLAST of CN192067 vs. ExPASy Swiss-Prot
Match: CP2F5_GORGO (Cytochrome P450 2F5 OS=Gorilla gorilla gorilla GN=CYP2F5 PE=3 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.617e-11
Identity = 40/127 (31.50%), Postives = 63/127 (49.61%), Query Frame = -1
Query:  303 VGRGNPIEESDITRLPYLQAVVKETFRLHPAVPLLIARKVSEDVEIASFTVPKGGQVFVNVWAIGRDENIWDNPHSFVPERFLGSDISYKGQNFELIPFGGGRRICPGLPLAIRMLHLMLGSLINSF 683
            VGR       D   +PY  AV+ E  R    +P+ +  +V+ D     F +PKG  +   +  +  D + +  P  F PE FL ++ S+K ++   +PF  GRR+C G  LA   L L L +++ SF
Sbjct:  332 VGRARLPALKDRAAMPYTDAVIHEVQRFADIIPMSLPHRVTRDTAFRGFLIPKGTDIITLLNTVHYDPSQFLTPQEFNPEHFLDANQSFK-KSPAFMPFSAGRRLCLGESLARMELFLYLTAILQSF 457          
BLAST of CN192067 vs. ExPASy Swiss-Prot
Match: CP2F1_HUMAN (Cytochrome P450 2F1 OS=Homo sapiens GN=CYP2F1 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.617e-11
Identity = 41/127 (32.28%), Postives = 63/127 (49.61%), Query Frame = -1
Query:  303 VGRGNPIEESDITRLPYLQAVVKETFRLHPAVPLLIARKVSEDVEIASFTVPKGGQVFVNVWAIGRDENIWDNPHSFVPERFLGSDISYKGQNFELIPFGGGRRICPGLPLAIRMLHLMLGSLINSF 683
            VGR       D   +PY  AV+ E  R    +P+ +  +V+ D     F +PKG  V   +  +  D + +  P  F PE FL ++ S+K ++   +PF  GRR+C G  LA   L L L +++ SF
Sbjct:  332 VGRARLPALKDRAAMPYTDAVIHEVQRFADIIPMNLPHRVTRDTAFRGFLIPKGTDVITLLNTVHYDPSQFLTPQEFNPEHFLDANQSFK-KSPAFMPFSAGRRLCLGESLARMELFLYLTAILQSF 457          
BLAST of CN192067 vs. ExPASy Swiss-Prot
Match: CP2C4_RABIT (Cytochrome P450 2C4 OS=Oryctolagus cuniculus GN=CYP2C4 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.617e-11
Identity = 38/127 (29.92%), Postives = 65/127 (51.18%), Query Frame = -1
Query:  303 VGRGNPIEESDITRLPYLQAVVKETFRLHPAVPLLIARKVSEDVEIASFTVPKGGQVFVNVWAIGRDENIWDNPHSFVPERFLGSDISYKGQNFELIPFGGGRRICPGLPLAIRMLHLMLGSLINSF 683
            +GR       D + +PY  AV+ E  R    +P  +   V+ DV+  ++ +PKG  +  ++ ++  DE  + NP  F P  FL    ++K  ++  +PF  G+R+C G  LA   L L L S++ +F
Sbjct:  328 IGRHRSPCMQDRSHMPYTDAVIHEIQRFIDLLPTNLPHAVTRDVKFRNYFIPKGTDIITSLTSVLHDEKAFPNPKVFDPGHFLDESGNFKKSDY-FMPFSAGKRMCVGEGLARMELFLFLTSILQNF 453          
BLAST of CN192067 vs. ExPASy Swiss-Prot
Match: CP254_MOUSE (Cytochrome P450 2C54 OS=Mus musculus GN=Cyp2c54 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.617e-11
Identity = 38/120 (31.67%), Postives = 65/120 (54.17%), Query Frame = -1
Query:  294 DITRLPYLQAVVKETFRLHPAVPLLIARKVSEDVEIASFTVPKGGQVFVNVWAIGRDENIWDNPHSFVPERFLGSDISYKGQNFELIPFGGGRRICPGLPLAIRMLHLMLGSLINSFDWK 653
            D + +PY  A++ E  R    VP  +  +V+ D++  ++ +PKG  V  ++ ++ RD   + NP  F P  FL  +  +K  ++  +PF  G+RIC G  LA   L L L S++ +F+ K
Sbjct:  341 DRSHMPYTNAMIHEVQRFIDLVPNNLPHEVTCDIKFRNYFIPKGTTVITSLSSVLRDSKEFPNPEKFDPGHFLDENGKFKKSDY-FMPFSTGKRICAGEGLARMELFLFLTSILQNFNLK 459          
BLAST of CN192067 vs. ExPASy Swiss-Prot
Match: THAS_MOUSE (Thromboxane-A synthase OS=Mus musculus GN=Tbxas1 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.112e-11
Identity = 36/113 (31.86%), Postives = 61/113 (53.98%), Query Frame = -1
Query:  303 LPYLQAVVKETFRLHPAVPLLIARKVSEDVEIASFTVPKGGQVFVNVWAIGRDENIWDNPHSFVPERFLGSDISYKGQNFELIPFGGGRRICPGLPLAIRMLHLMLGSLINSF 641
            LPYL  V+ ET R++P       R+ ++D E+    +P G  + + V A+  D   W NP +F PERF  ++   + + F  +PFG G R C G+ L + ++ L +  +++ F
Sbjct:  390 LPYLDMVISETLRMYPPA-FRFTREAAQDCEVLGQRIPAGTVLEIAVGALHHDPEHWPNPETFDPERFT-AEARLQRRPFTYLPFGAGPRSCLGVRLGLLVVKLTILQVLHKF 500          
BLAST of CN192067 vs. ExPASy Swiss-Prot
Match: CP3A8_MACFA (Cytochrome P450 3A8 OS=Macaca fascicularis GN=CYP3A8 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.112e-11
Identity = 40/142 (28.17%), Postives = 73/142 (51.41%), Query Frame = -1
Query:  228 ITRLPYLQAVVKETFRLHPAVPLLIARKVSEDVEIASFTVPKGGQVFVNVWAIGRDENIWDNPHSFVPERFLGSDISYKGQNFELIPFGGGRRICPGLPLAIRMLHLMLGSLINSFDWK-LEDGNMDMEEKFGLTIQKAQPL 650
            + ++ YL  VV ET R+ P + + + R   +DVEI    +PKG  V +  +A+  D   W  P  F+PERF   + +     +   PFG G R C G+  A+  + L +  ++ +F +K  ++  + ++ + G  +Q  +P+
Sbjct:  350 VLQMEYLDMVVNETLRIFP-IAMRLERVCKKDVEINGIFIPKGVVVMIPSYALHHDPKYWPEPEKFLPERFSKKN-NDNIDPYIYTPFGSGPRNCIGMRFALMNMKLAIIRVLQNFSFKPCKETQIPLKLRLGGLLQTEKPI 489          
BLAST of CN192067 vs. ExPASy Swiss-Prot
Match: THAS_BOVIN (Thromboxane-A synthase OS=Bos taurus GN=TBXAS1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.758e-11
Identity = 38/113 (33.63%), Postives = 58/113 (51.33%), Query Frame = -1
Query:  303 LPYLQAVVKETFRLHPAVPLLIARKVSEDVEIASFTVPKGGQVFVNVWAIGRDENIWDNPHSFVPERFLGSDISYKGQNFELIPFGGGRRICPGLPLAIRMLHLMLGSLINSF 641
            LPYL  V+KET R++P       R  ++D E+    +P G  +   V A+  D   W NP +F PERF  ++   + + +  +PFG G R C G+ L +  L L L  ++  F
Sbjct:  390 LPYLDMVIKETLRMYPPA-FRFTRVAAQDCEVLGQRIPAGAVLETAVGALHYDPEHWPNPENFNPERFT-AEAQQRRRPYTYLPFGAGPRSCLGVRLGLLELKLTLLHILRKF 500          
BLAST of CN192067 vs. ExPASy Swiss-Prot
Match: CP3AL_CALJA (Cytochrome P450 3A21 OS=Callithrix jacchus GN=CYP3A21 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.758e-11
Identity = 43/148 (29.05%), Postives = 73/148 (49.32%), Query Frame = -1
Query:  228 PIEESDITRLPYLQAVVKETFRLHPAVPLLIARKVSEDVEIASFTVPKGGQVFVNVWAIGRDENIWDNPHSFVPERFLGSDISYKGQNFELIPFGGGRRICPGLPLAIRMLHLMLGSLINSFDWK-LEDGNMDMEEKFGLTIQKAQPL 668
            P     + ++ YL  VV ET RL P + + + R   +DVEI    +PKG  V +  +A+  D   W  P  F+PERF   +       +   PFG G R C G+  A+  + L L  ++ +F +K  ++  + ++ + G  +Q  +P+
Sbjct:  344 PATYDTVLQMEYLDMVVNETLRLFP-LAMRLERVCKKDVEINGVFIPKGVVVMIPSYALHYDPKYWTEPEKFLPERF-SKNNKDNIDPYIYTPFGTGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLRLGGLLQTEKPI 489          
The following BLAST results are available for this feature:
BLAST of CN192067 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 424
Match NameE-valueIdentityDescription
CP3AV_MESAU1.617e-1133.33Cytochrome P450 3A31 OS=Mesocricetus auratus GN=CY... [more]
CP3A7_HUMAN1.617e-1130.82Cytochrome P450 3A7 OS=Homo sapiens GN=CYP3A7 PE=1... [more]
CP2F5_GORGO1.617e-1131.50Cytochrome P450 2F5 OS=Gorilla gorilla gorilla GN=... [more]
CP2F1_HUMAN1.617e-1132.28Cytochrome P450 2F1 OS=Homo sapiens GN=CYP2F1 PE=1... [more]
CP2C4_RABIT1.617e-1129.92Cytochrome P450 2C4 OS=Oryctolagus cuniculus GN=CY... [more]
CP254_MOUSE1.617e-1131.67Cytochrome P450 2C54 OS=Mus musculus GN=Cyp2c54 PE... [more]
THAS_MOUSE2.112e-1131.86Thromboxane-A synthase OS=Mus musculus GN=Tbxas1 P... [more]
CP3A8_MACFA2.112e-1128.17Cytochrome P450 3A8 OS=Macaca fascicularis GN=CYP3... [more]
THAS_BOVIN2.758e-1133.63Thromboxane-A synthase OS=Bos taurus GN=TBXAS1 PE=... [more]
CP3AL_CALJA2.758e-1129.05Cytochrome P450 3A21 OS=Callithrix jacchus GN=CYP3... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0006E19_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006E19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192067 ID=CN192067; Name=CN192067; organism=Citrus sinensis; type=EST; length=683bp
TTTTTTGTTATCAAGTGTCACATATTTTTTGCTTACATATTGATCCACTC
ATAAATGTGGATTAAGGTGATCATTTAGATAATTGCTCATAAATAATAAG
AACAATGATAAACAACAATGATGAATAAATACTAACGACAAAGTGCTTTA
TTGGTTACAATTGAGTGCACTCCAACGGGATGGAAAATTAACTATACTGA
GGACTAAATGGCAACAGGGACAACACGAAGGGGTTGAGCCTTCTGTATAG
TGAGGCCAAATTTCTCTTCCATGTCCATGTTCCCATCTTCAAGCTTCCAA
TCAAAAGAATTAATAAGTGAACCGAGCATTAGATGTAACATTCTGATTGC
CAATGGCAAACCCGGACAAATGCGCCGCCCACCTCCGAAGGGAATTAGCT
CAAAATTTTGGCCTTTGTAAGAAATATCTGACCCCAAAAATCTTTCGGGT
ACAAAAGAGTGAGGATTGTCCCATATGTTTTCATCTCTACCAATAGCCCA
TACGTTAACAAAAACTTGCCCACCTTTCGGCACTGTGAAGCTTGCAATTT
CAACATCTTCAGAGACTTTGCGGGCGATTAATAAAGGAACTGCCGGGTGC
AACCTAAAAGTTTCTTTAACAACTGCTTGTAGATAAGGTAACCGAGTGAT
GTCAGATTCTTCAATTGGGTTGCCTCTGCCAAC
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