CN192067

Overview
NameCN192067
Unique NameCN192067
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length683
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN192067 vs. ExPASy Swiss-Prot
Match: CP2S1_MOUSE (Cytochrome P450 2S1 OS=Mus musculus GN=Cyp2s1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.758e-11
Identity = 42/127 (33.07%), Postives = 65/127 (51.18%), Query Frame = -1
Query:  303 VGRGNPIEESDITRLPYLQAVVKETFRLHPAVPLLIARKVSEDVEIASFTVPKGGQVFVNVWAIGRDENIWDNPHSFVPERFLGSDISYKGQNFELIPFGGGRRICPGLPLAIRMLHLMLGSLINSF 683
            +G G     SD  RLPY  AV+ E  RL   VP+ +   ++       +T+PKG +VF  + +I  D  ++ NP  F P RFL  D   + ++   +P+  G+R+C G  LA   L L   S++ +F
Sbjct:  337 LGPGRAPSLSDRVRLPYTDAVLHEAQRLLALVPMGMPHTITRTTCFRGYTLPKGTEVFPLIGSILHDPAVFQNPGEFHPGRFLDEDGRLR-KHEAFLPYSLGKRVCLGEGLARAELWLFFTSILQAF 462          
BLAST of CN192067 vs. ExPASy Swiss-Prot
Match: CP2K4_ONCMY (Cytochrome P450 2K4 OS=Oncorhynchus mykiss GN=cyp2k4 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.758e-11
Identity = 41/140 (29.29%), Postives = 68/140 (48.57%), Query Frame = -1
Query:  246 DITRLPYLQAVVKETFRLHPAVPLLIARKVSEDVEIASFTVPKGGQVFVNVWAIGRDENIWDNPHSFVPERFLGSDISYKGQNFELIPFGGGRRICPGLPLAIRMLHLMLGSLINSFDWK----LEDGNMDMEEKFGLTI 653
            D   LPY  AV+ ET RL    P+ +    S DV    + + KG  V   + ++ +D+N W++P++F P  FL     +  ++   + F  GRR+C G  LA   L L   SL+  F +     + + ++D+    G T+
Sbjct:  353 DRKNLPYTDAVIHETQRLANISPMAVPHTTSRDVTFQGYFIKKGTSVIPLLMSVLQDDNEWESPNTFNPSHFLDEQGGFVKRD-AFMAFSAGRRVCLGEGLARMELFLFFTSLLQRFRFSPPPGVTEDDLDLTPLLGFTL 491          
BLAST of CN192067 vs. ExPASy Swiss-Prot
Match: CP27A_HUMAN (Sterol 26-hydroxylase, mitochondrial OS=Homo sapiens GN=CYP27A1 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.758e-11
Identity = 42/130 (32.31%), Postives = 64/130 (49.23%), Query Frame = -1
Query:  303 VGRGNPIEESDITRLPYLQAVVKETFRLHPAVPLLIARKVSEDVEIASFTVPKGGQVFVNVWAIGRDENIWDNPHSFVPERFLGSDISYKGQ---NFELIPFGGGRRICPGLPLAIRMLHLMLGSLINSF 683
            V  G   +  D   +P L+AV+KET RL+P VP   +R + +++E+  F  PK  Q     + + RD   +  P SF P R+L +      +    F  +PFG G R C G  +A   + L+L  LI  +
Sbjct:  369 VPAGQVPQHKDFAHMPLLKAVLKETLRLYPVVP-TNSRIIEKEIEVDGFLFPKNTQFVFCHYVVSRDPTAFSEPESFQPHRWLRNSQPATPRIQHPFGSVPFGYGVRACLGRRIAELEMQLLLARLIQKY 497          
BLAST of CN192067 vs. ExPASy Swiss-Prot
Match: C4G15_DROME (Cytochrome P450 4g15 OS=Drosophila melanogaster GN=Cyp4g15 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.758e-11
Identity = 45/154 (29.22%), Postives = 80/154 (51.95%), Query Frame = -1
Query:  243 PIEESDITRLPYLQAVVKETFRLHPAVPLLIARKVSEDVEIAS--FTVPKGGQVFVNVWAIGRDENIWDNPHSFVPERFLGSDISYKGQNFELIPFGGGRRICPGLPLAIRMLHLMLGSLINSF---------DWKLE-DGNMDMEEKFGLTIQ 668
            P    D   + YL+  + ET R++P VPL IAR++ ED+++ S  + +P+G  V V    + R+  ++ NP+ F P+ FL  +       +  +PF  G R C G   A+  L ++L +++ ++         D+KL+ D  +  EE F + +Q
Sbjct:  419 PATFQDTLEMKYLERCLMETLRMYPPVPL-IARELQEDLKLNSGNYVIPRGATVTVATVLLHRNPKVYANPNVFDPDNFL-PERQANRHYYAFVPFSAGPRSCVGRKYAMLKLKILLSTILRNYRVYSDLTESDFKLQADIILKREEGFRVRLQ 570          
BLAST of CN192067 vs. ExPASy Swiss-Prot
Match: C4D21_DROME (Probable cytochrome P450 4d21 OS=Drosophila melanogaster GN=Cyp4d21 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.758e-11
Identity = 35/122 (28.69%), Postives = 61/122 (50.00%), Query Frame = -1
Query:  300 IEESDITRLPYLQAVVKETFRLHPAVPLLIARKVSEDVEIASFTVPKGGQVFVNVWAIGRDENIWDNPHSFVPERFLGSDISYKGQNFELIPFGGGRRICPGLPLAIRMLHLMLGSLINSFD 665
            + ++ +  L YL  V+KET RLHP VP+L  R + ED++I   T+P    + +  + + RD   + +P  F PER++    +        IPF  G + C G   A   +  ++  +I  ++
Sbjct:  358 VTQTKLLELKYLDCVIKETMRLHPPVPIL-GRYIPEDLKIGEITIPGNTSILLMPYYVYRDPEYFPDPLVFKPERWMDMKTTSNTPPLAYIPFSSGPKNCIGQKFANLQMKALISKVIRHYE 478          
BLAST of CN192067 vs. ExPASy Swiss-Prot
Match: CP4E3_DROME (Cytochrome P450 4e3 OS=Drosophila melanogaster GN=Cyp4e3 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.602e-11
Identity = 39/118 (33.05%), Postives = 63/118 (53.39%), Query Frame = -1
Query:  300 DITRLPYLQAVVKETFRLHPAVPLLIARKVSEDVEIASFTVPKGGQVFVNVWAIGRDENIWDNPHSFVPERFLGSDISYKGQNFELIPFGGGRRICPGLPLAIRMLHLMLGSLINSFD 653
            +I ++ YL   +KE  R++P+VP  I R   +D +I    VPKG  + + +  +G ++ I+ +PH F PERF       K   FE +PF  G R C G   A+  L  ++  ++ SF+
Sbjct:  353 EIAKMKYLDLFIKEAQRVYPSVPF-IGRYCDKDYDINGSIVPKGTTLNLALILLGYNDRIFKDPHHFRPERF----EEEKPAPFEYLPFSAGPRNCIGQKFALLELKTVISKVVRSFE 465          
BLAST of CN192067 vs. ExPASy Swiss-Prot
Match: CP3AS_BOVIN (Cytochrome P450 3A28 OS=Bos taurus GN=CYP3A28 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.602e-11
Identity = 40/119 (33.61%), Postives = 60/119 (50.42%), Query Frame = -1
Query:  294 ITRLPYLQAVVKETFRLHPAVPLLIARKVSEDVEIASFTVPKGGQVFVNVWAIGRDENIWDNPHSFVPERFLGSDISYKGQNFELIPFGGGRRICPGLPLAIRMLHLMLGSLINSFDWK 650
            + ++ YL  VV ET R+ P    L  R   +DVEI   T+PKG  V V ++ +  +  +W  P  F PERF   +       +  +PFG G R C G+  AI  + L L  ++ +F +K
Sbjct:  350 LVQMEYLDMVVNETLRMFPIAGRL-ERVCKKDVEIHGVTIPKGTTVLVPLFVLHNNPELWPEPEEFRPERF-SKNNKDSINPYVYLPFGTGPRNCLGMRFAIMNIKLALVRILQNFSFK 466          
BLAST of CN192067 vs. ExPASy Swiss-Prot
Match: CP2K1_ONCMY (Cytochrome P450 2K1 OS=Oncorhynchus mykiss GN=cyp2k1 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.602e-11
Identity = 41/140 (29.29%), Postives = 69/140 (49.29%), Query Frame = -1
Query:  246 DITRLPYLQAVVKETFRLHPAVPLLIARKVSEDVEIASFTVPKGGQVFVNVWAIGRDENIWDNPHSFVPERFLGSDISYKGQNFELIPFGGGRRICPGLPLAIRMLHLMLGSLINSFDWK----LEDGNMDMEEKFGLTI 653
            D   LPY  AV+ ET RL   VP+ +    S DV    + + KG  V   + ++ +D++ W++P++F P  FL     +  ++   + F  GRR+C G  LA   L L   SL+  F +     + + ++D+    G T+
Sbjct:  353 DRKNLPYTDAVIHETQRLANIVPMSVPHTTSRDVTFQGYFIKKGTSVIPLLTSVLQDDSEWESPNTFNPSHFLDEQGGFVKRD-AFMAFSAGRRVCLGEGLARMELFLFFTSLLQRFRFSPPPGVTEDDLDLTPLLGFTL 491          
BLAST of CN192067 vs. ExPASy Swiss-Prot
Match: CP2CS_MESAU (Cytochrome P450 2C28 OS=Mesocricetus auratus GN=CYP2C28 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.602e-11
Identity = 38/130 (29.23%), Postives = 69/130 (53.08%), Query Frame = -1
Query:  294 VGRGNPIEESDITRLPYLQAVVKETFRLHPAVPLLIARKVSEDVEIASFTVPKGGQVFVNVWAIGRDENIWDNPHSFVPERFLGSDISYKGQNFELIPFGGGRRICPGLPLAIRMLHLMLGSLINSFDWK 683
            +GR       D TR+PY  A+V E  R    +P  +    + +V+  ++ +PKG  +  ++ ++  D+  + NP  F P  FL  + ++K  ++  +PF  G+R+C G  LA   L L+L +++ +FD K
Sbjct:  331 IGRDRSPCMQDRTRMPYTDAMVHEVQRYVNLIPNNVPHAATCNVKFRNYVIPKGTDLITSLTSVLHDDKEFPNPKIFDPAHFLDENGNFKKSDY-FMPFSIGKRMCMGEALARMELFLLLTTILQNFDLK 459          
BLAST of CN192067 vs. ExPASy Swiss-Prot
Match: C86A1_ARATH (Cytochrome P450 86A1 OS=Arabidopsis thaliana GN=CYP86A1 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.602e-11
Identity = 50/157 (31.85%), Postives = 79/157 (50.32%), Query Frame = -1
Query:  222 PIEESDITRLPYLQAVVKETFRLHPAVPLLIARKVSEDVEIASFTVPKGGQVFVNVWAIGRDENIW-DNPHSFVPERFLGSDISYKGQNFE-------LIPFGGGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDGNMDMEEKFGLTIQKAQPLRV 668
            P+E  +  RL YL+A + ET RL+P+VP      V +DV      VP+G  V  ++++IGR + IW ++   F PER+L +D    G+ FE        + F  G R C G  LA   +  +  +++  +      G+  +E+K  LT+     LRV
Sbjct:  352 PLEFDEADRLVYLKAALAETLRLYPSVPQDFKYVVDDDVLPDGTFVPRGSTVTYSIYSIGRMKTIWGEDCLEFRPERWLTAD----GERFETPKDGYKFVAFNAGPRTCLGKDLAYNQMKSVASAVLLRYRVFPVPGHR-VEQKMSLTLFMKNGLRV 503          
The following BLAST results are available for this feature:
BLAST of CN192067 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 424
Match NameE-valueIdentityDescription
CP2S1_MOUSE2.758e-1133.07Cytochrome P450 2S1 OS=Mus musculus GN=Cyp2s1 PE=2... [more]
CP2K4_ONCMY2.758e-1129.29Cytochrome P450 2K4 OS=Oncorhynchus mykiss GN=cyp2... [more]
CP27A_HUMAN2.758e-1132.31Sterol 26-hydroxylase, mitochondrial OS=Homo sapie... [more]
C4G15_DROME2.758e-1129.22Cytochrome P450 4g15 OS=Drosophila melanogaster GN... [more]
C4D21_DROME2.758e-1128.69Probable cytochrome P450 4d21 OS=Drosophila melano... [more]
CP4E3_DROME3.602e-1133.05Cytochrome P450 4e3 OS=Drosophila melanogaster GN=... [more]
CP3AS_BOVIN3.602e-1133.61Cytochrome P450 3A28 OS=Bos taurus GN=CYP3A28 PE=2... [more]
CP2K1_ONCMY3.602e-1129.29Cytochrome P450 2K1 OS=Oncorhynchus mykiss GN=cyp2... [more]
CP2CS_MESAU3.602e-1129.23Cytochrome P450 2C28 OS=Mesocricetus auratus GN=CY... [more]
C86A1_ARATH3.602e-1131.85Cytochrome P450 86A1 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0006E19_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006E19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192067 ID=CN192067; Name=CN192067; organism=Citrus sinensis; type=EST; length=683bp
TTTTTTGTTATCAAGTGTCACATATTTTTTGCTTACATATTGATCCACTC
ATAAATGTGGATTAAGGTGATCATTTAGATAATTGCTCATAAATAATAAG
AACAATGATAAACAACAATGATGAATAAATACTAACGACAAAGTGCTTTA
TTGGTTACAATTGAGTGCACTCCAACGGGATGGAAAATTAACTATACTGA
GGACTAAATGGCAACAGGGACAACACGAAGGGGTTGAGCCTTCTGTATAG
TGAGGCCAAATTTCTCTTCCATGTCCATGTTCCCATCTTCAAGCTTCCAA
TCAAAAGAATTAATAAGTGAACCGAGCATTAGATGTAACATTCTGATTGC
CAATGGCAAACCCGGACAAATGCGCCGCCCACCTCCGAAGGGAATTAGCT
CAAAATTTTGGCCTTTGTAAGAAATATCTGACCCCAAAAATCTTTCGGGT
ACAAAAGAGTGAGGATTGTCCCATATGTTTTCATCTCTACCAATAGCCCA
TACGTTAACAAAAACTTGCCCACCTTTCGGCACTGTGAAGCTTGCAATTT
CAACATCTTCAGAGACTTTGCGGGCGATTAATAAAGGAACTGCCGGGTGC
AACCTAAAAGTTTCTTTAACAACTGCTTGTAGATAAGGTAACCGAGTGAT
GTCAGATTCTTCAATTGGGTTGCCTCTGCCAAC
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