CN192067

Overview
NameCN192067
Unique NameCN192067
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length683
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN192067 vs. ExPASy Swiss-Prot
Match: CP2B2_RAT (Cytochrome P450 2B2 OS=Rattus norvegicus GN=Cyp2b2 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 8.024e-11
Identity = 37/127 (29.13%), Postives = 66/127 (51.97%), Query Frame = -1
Query:  303 VGRGNPIEESDITRLPYLQAVVKETFRLHPAVPLLIARKVSEDVEIASFTVPKGGQVFVNVWAIGRDENIWDNPHSFVPERFLGSDISYKGQNFELIPFGGGRRICPGLPLAIRMLHLMLGSLINSF 683
            +G   P    D T++PY  AV+ E  R     P+ +  +V++D     + +PK  +V+  + +   D   +D+P +F PE FL +D + K ++   +PF  G+RIC G  +A   L L   +++ +F
Sbjct:  332 IGSHRPPSLDDRTKMPYTDAVIHEIQRFADLAPIGLPHRVTKDTMFRGYLLPKNTEVYPILSSALHDPQYFDHPDTFNPEHFLDADGTLK-KSEAFMPFSTGKRICLGEGIARNELFLFFTTILQNF 457          
BLAST of CN192067 vs. ExPASy Swiss-Prot
Match: CP239_MOUSE (Cytochrome P450 2C39 OS=Mus musculus GN=Cyp2c39 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.024e-11
Identity = 39/130 (30.00%), Postives = 67/130 (51.54%), Query Frame = -1
Query:  294 VGRGNPIEESDITRLPYLQAVVKETFRLHPAVPLLIARKVSEDVEIASFTVPKGGQVFVNVWAIGRDENIWDNPHSFVPERFLGSDISYKGQNFELIPFGGGRRICPGLPLAIRMLHLMLGSLINSFDWK 683
            +GR       D   +PY  A++ E  R    VP  I R V+ D++  ++ +PKG  V  ++ ++  D   + NP  F P  FL ++ ++K ++   +PF  G+R+C G  LA   L L L +++ +F  K
Sbjct:  331 IGRHRSPCMQDRNHMPYTDAMIHEVQRFINLVPNNIPRAVTCDIKFRNYLIPKGTTVVTSLTSVLHDSKEFPNPELFDPGHFLDANGNFK-KSDHFMPFSAGKRVCAGEGLARMELFLFLTTILQNFKLK 459          
BLAST of CN192067 vs. ExPASy Swiss-Prot
Match: C5142_DICDI (Probable cytochrome P450 514A2 OS=Dictyostelium discoideum GN=cyp514a2 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.024e-11
Identity = 43/147 (29.25%), Postives = 75/147 (51.02%), Query Frame = -1
Query:  243 NPIEESDITRLPYLQAVVKETFRLHPAVPLLIARKVSEDVEIASFTVPKGGQVFVNVWAIGRDENIW-DNPHSFVPERFLGSDISYKGQNFELIPFGGGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDGN---MDMEEKFGLTIQ 671
            N I  SD ++ PY+ +++ ET+R + +VPL      +ED+E+  + + KG Q++ N+      +  W ++   F PERF    ++ KG    L+ FG G R CPG          ++  L  ++  KL++ N   +D     GL++Q
Sbjct:  348 NNISFSDHSKYPYIISIMNETYRYYASVPLPEPNMTTEDIEVDGYKIAKGTQIYKNIRGTLISKEFWGEDALEFKPERFKTQTLNQKG----LLHFGAGPRGCPGARFTECFFFTLMVLLFKNY--KLQNPNDNPIDDRGDVGLSMQ 488          
BLAST of CN192067 vs. ExPASy Swiss-Prot
Match: C13A4_CAEEL (Putative cytochrome P450 CYP13A4 OS=Caenorhabditis elegans GN=cyp-13A4 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.024e-11
Identity = 37/118 (31.36%), Postives = 63/118 (53.39%), Query Frame = -1
Query:  303 ITRLPYLQAVVKETFRLHPAVPLLIARKVSEDVEIASFTVPKGGQVFVNVWAIGRDENIW-DNPHSFVPERF-LGSDISYKGQNFELIPFGGGRRICPGLPLAIRMLHLMLGSLINSF 650
            I++L Y++ VVKE  R++P   L+  RK  +   +    + +G  V V+ W +  D  +W D+   F PER+  G ++ Y    +  +PFG G RIC G+ LA+    L+L  ++  +
Sbjct:  370 ISKLKYMECVVKEALRMYPLASLVHNRKCMKKTNVLGVEIDEGTNVQVDTWTLHYDPKVWGDDASEFKPERWETGDELFYAKGGY--LPFGMGPRICIGMRLAMMEEKLLLTHILKKY 485          
The following BLAST results are available for this feature:
BLAST of CN192067 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 424
Match NameE-valueIdentityDescription
CP2B2_RAT8.024e-1129.13Cytochrome P450 2B2 OS=Rattus norvegicus GN=Cyp2b2... [more]
CP239_MOUSE8.024e-1130.00Cytochrome P450 2C39 OS=Mus musculus GN=Cyp2c39 PE... [more]
C5142_DICDI8.024e-1129.25Probable cytochrome P450 514A2 OS=Dictyostelium di... [more]
C13A4_CAEEL8.024e-1131.36Putative cytochrome P450 CYP13A4 OS=Caenorhabditis... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0006E19_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006E19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192067 ID=CN192067; Name=CN192067; organism=Citrus sinensis; type=EST; length=683bp
TTTTTTGTTATCAAGTGTCACATATTTTTTGCTTACATATTGATCCACTC
ATAAATGTGGATTAAGGTGATCATTTAGATAATTGCTCATAAATAATAAG
AACAATGATAAACAACAATGATGAATAAATACTAACGACAAAGTGCTTTA
TTGGTTACAATTGAGTGCACTCCAACGGGATGGAAAATTAACTATACTGA
GGACTAAATGGCAACAGGGACAACACGAAGGGGTTGAGCCTTCTGTATAG
TGAGGCCAAATTTCTCTTCCATGTCCATGTTCCCATCTTCAAGCTTCCAA
TCAAAAGAATTAATAAGTGAACCGAGCATTAGATGTAACATTCTGATTGC
CAATGGCAAACCCGGACAAATGCGCCGCCCACCTCCGAAGGGAATTAGCT
CAAAATTTTGGCCTTTGTAAGAAATATCTGACCCCAAAAATCTTTCGGGT
ACAAAAGAGTGAGGATTGTCCCATATGTTTTCATCTCTACCAATAGCCCA
TACGTTAACAAAAACTTGCCCACCTTTCGGCACTGTGAAGCTTGCAATTT
CAACATCTTCAGAGACTTTGCGGGCGATTAATAAAGGAACTGCCGGGTGC
AACCTAAAAGTTTCTTTAACAACTGCTTGTAGATAAGGTAACCGAGTGAT
GTCAGATTCTTCAATTGGGTTGCCTCTGCCAAC
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