CN192062
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBC11_YEAST (Ubiquitin-conjugating enzyme E2-18 kDa OS=Saccharomyces cerevisiae GN=UBC11 PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.235e-24 Identity = 54/90 (60.00%), Postives = 69/90 (76.67%), Query Frame = -3 Query: 279 SLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLN-NKEDYRKMVQKQY 545 SL+FP +YPF PP +KF + +HPNVD+ GNICLDIL++KWS+ Y+ TILLS+QSLLGEPN SPLN+ AA L + + E+YRK V Y Sbjct: 61 SLKFPQNYPFHPPMIKFLSPMWHPNVDKSGNICLDILKEKWSAVYNVETILLSLQSLLGEPNNRSPLNAVAAELWDADMEEYRKKVLACY 150
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBC11_SCHPO (Ubiquitin-conjugating enzyme E2-20 kDa OS=Schizosaccharomyces pombe GN=ubc11 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 8.482e-23 Identity = 48/90 (53.33%), Postives = 68/90 (75.56%), Query Frame = -3 Query: 279 SLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKE-DYRKMVQKQY 545 S+ FP +YP+ PP + F + +HPNVD GNICLDIL+DKWS+ Y+ +TILLS+QSLLGEPN SPLN+ AA L + +Y++++ ++Y Sbjct: 81 SMSFPANYPYSPPTIIFTSPMWHPNVDMSGNICLDILKDKWSAVYNVQTILLSLQSLLGEPNNASPLNAQAAELWSKDPIEYKRLLMQRY 170 HSP 2 Score: 21.557 bits (44), Expect = 8.482e-23 Identity = 9/16 (56.25%), Postives = 9/16 (56.25%), Query Frame = -1 Query: 563 HLIGTIEGGKGTMYEG 610 H GTI G T YEG Sbjct: 60 HWAGTITGPSDTYYEG 75
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBC1_CAEEL (Ubiquitin-conjugating enzyme E2 1 OS=Caenorhabditis elegans GN=ubc-1 PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.373e-21 Identity = 52/88 (59.09%), Postives = 60/88 (68.18%), Query Frame = -3 Query: 285 SLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQK 545 SL F +YP KPP VKF + FHPNV G+ICLDILQ++WS YD IL SIQSLL EPNP SP NS AA L N+ +Y K VQ+ Sbjct: 56 SLEFTEEYPNKPPTVKFISKMFHPNVYADGSICLDILQNRWSPTYDVAAILTSIQSLLDEPNPNSPANSLAAQLYQENRREYEKRVQQ 143
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBE2A_MOUSE (Ubiquitin-conjugating enzyme E2 A OS=Mus musculus GN=Ube2a PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 4.835e-20 Identity = 49/86 (56.98%), Postives = 59/86 (68.60%), Query Frame = -3 Query: 291 SLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMV 545 ++ F +YP KPP V+F + FHPNV G+ICLDILQ++WS YD +IL SIQSLL EPNP SP NS AA L NK +Y K V Sbjct: 56 TIEFTEEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRV 141
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBE2A_HUMAN (Ubiquitin-conjugating enzyme E2 A OS=Homo sapiens GN=UBE2A PE=2 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 4.835e-20 Identity = 49/86 (56.98%), Postives = 59/86 (68.60%), Query Frame = -3 Query: 291 SLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMV 545 ++ F +YP KPP V+F + FHPNV G+ICLDILQ++WS YD +IL SIQSLL EPNP SP NS AA L NK +Y K V Sbjct: 56 TIEFTEEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRV 141
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBC2_MEDSA (Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa GN=UBC2 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.314e-20 Identity = 48/88 (54.55%), Postives = 62/88 (70.45%), Query Frame = -3 Query: 285 SLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLN-NKEDYRKMVQK 545 SL+F DYP KPP V+F + FHPN+ G+ICLDILQ++WS YD IL SIQSLL +PNP SP NS AA + + NK +Y + V++ Sbjct: 56 SLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVRE 143
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBE2B_RAT (Ubiquitin-conjugating enzyme E2 B OS=Rattus norvegicus GN=Ube2b PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 8.247e-20 Identity = 49/85 (57.65%), Postives = 58/85 (68.24%), Query Frame = -3 Query: 291 LRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMV 542 + F +YP KPP V+F + FHPNV G+ICLDILQ++WS YD +IL SIQSLL EPNP SP NS AA L NK +Y K V Sbjct: 57 IEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRV 141
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBE2B_RABIT (Ubiquitin-conjugating enzyme E2 B OS=Oryctolagus cuniculus GN=UBE2B PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 8.247e-20 Identity = 49/85 (57.65%), Postives = 58/85 (68.24%), Query Frame = -3 Query: 291 LRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMV 542 + F +YP KPP V+F + FHPNV G+ICLDILQ++WS YD +IL SIQSLL EPNP SP NS AA L NK +Y K V Sbjct: 57 IEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRV 141
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBE2B_MOUSE (Ubiquitin-conjugating enzyme E2 B OS=Mus musculus GN=Ube2b PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 8.247e-20 Identity = 49/85 (57.65%), Postives = 58/85 (68.24%), Query Frame = -3 Query: 291 LRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMV 542 + F +YP KPP V+F + FHPNV G+ICLDILQ++WS YD +IL SIQSLL EPNP SP NS AA L NK +Y K V Sbjct: 57 IEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRV 141
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBE2B_HUMAN (Ubiquitin-conjugating enzyme E2 B OS=Homo sapiens GN=UBE2B PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 8.247e-20 Identity = 49/85 (57.65%), Postives = 58/85 (68.24%), Query Frame = -3 Query: 291 LRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMV 542 + F +YP KPP V+F + FHPNV G+ICLDILQ++WS YD +IL SIQSLL EPNP SP NS AA L NK +Y K V Sbjct: 57 IEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRV 141 The following BLAST results are available for this feature:
BLAST of CN192062 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 188
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Sequences
The
following sequences are available for this feature:
EST sequence >CN192062 ID=CN192062; Name=CN192062; organism=Citrus sinensis; type=EST; length=637bpback to top |