CN192062
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBE2K_MOUSE (Ubiquitin-conjugating enzyme E2 K OS=Mus musculus GN=Ube2k PE=2 SV=3) HSP 1 Score: 74.3294 bits (181), Expect = 5.724e-13 Identity = 33/72 (45.83%), Postives = 49/72 (68.06%), Query Frame = -3 Query: 330 LRFPLDYPFKPPQVKFETMCFHPNVDQY-GNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAA 542 ++ P YPF PP+V+F T +HPN+ G ICLDIL+D+W++A RT+LLS+Q+LL P+ P ++ A Sbjct: 60 IKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVA 131
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBE2K_HUMAN (Ubiquitin-conjugating enzyme E2 K OS=Homo sapiens GN=UBE2K PE=1 SV=3) HSP 1 Score: 74.3294 bits (181), Expect = 5.724e-13 Identity = 33/72 (45.83%), Postives = 49/72 (68.06%), Query Frame = -3 Query: 330 LRFPLDYPFKPPQVKFETMCFHPNVDQY-GNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAA 542 ++ P YPF PP+V+F T +HPN+ G ICLDIL+D+W++A RT+LLS+Q+LL P+ P ++ A Sbjct: 60 IKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVA 131
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBE2K_BOVIN (Ubiquitin-conjugating enzyme E2 K OS=Bos taurus GN=UBE2K PE=1 SV=3) HSP 1 Score: 74.3294 bits (181), Expect = 5.724e-13 Identity = 33/72 (45.83%), Postives = 49/72 (68.06%), Query Frame = -3 Query: 330 LRFPLDYPFKPPQVKFETMCFHPNVDQY-GNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAA 542 ++ P YPF PP+V+F T +HPN+ G ICLDIL+D+W++A RT+LLS+Q+LL P+ P ++ A Sbjct: 60 IKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVA 131
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBC1_YEAST (Ubiquitin-conjugating enzyme E2-24 kDa OS=Saccharomyces cerevisiae GN=UBC1 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 5.724e-13 Identity = 33/84 (39.29%), Postives = 54/84 (64.29%), Query Frame = -3 Query: 297 LRFPLDYPFKPPQVKFETMCFHPNVDQY-GNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAA-LLNNKEDYRK 542 + P++YPFKPP+++F+T +HPN+ G ICLDIL++ WS ++ L+S+Q+LL P P P ++ A L ++E + K Sbjct: 56 IEVPMEYPFKPPKMQFDTKVYHPNISSVTGAICLDILKNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNK 139
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UB12L_ARATH (Probable NEDD8-conjugating enzyme Ubc12-like OS=Arabidopsis thaliana GN=RCE2 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 5.724e-13 Identity = 38/106 (35.85%), Postives = 60/106 (56.60%), Query Frame = -3 Query: 267 GNYV*GFYHTNFSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQKQYFAGE 581 GN+V F +N YP + P+VK +T +HPN+D GN+CL+IL++ W + T++ + L EPN E PLN AAA+L +N + + V++ G+ Sbjct: 77 GNFVFSFQVSNM-------YPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLFHLFTEPNYEDPLNHEAAAVLRDNPKTFEYNVRRAMMGGQ 175
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: RCE1_ARATH (NEDD8-conjugating enzyme Ubc12 OS=Arabidopsis thaliana GN=RCE1 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 5.724e-13 Identity = 34/87 (39.08%), Postives = 52/87 (59.77%), Query Frame = -3 Query: 315 GFYHTN---FSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNN 566 G+YH F+ + YP + P+VK +T +HPN+D GN+CL+IL++ W + T++ + L EPN E PLN AAA+L + Sbjct: 71 GYYHNGTFVFTFQVSPVYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLFHLFTEPNSEDPLNHDAAAVLRD 157
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBE2T_MOUSE (Ubiquitin-conjugating enzyme E2 T OS=Mus musculus GN=Ube2t PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 9.764e-13 Identity = 34/67 (50.75%), Postives = 44/67 (65.67%), Query Frame = -3 Query: 345 PLDYPFKPPQVKFETMCFHPNVDQYGNICLDIL----QDKWSSAYDCRTILLSIQSLLGEPNPESPL 533 P YPF+PPQV+F T +HPN+D G ICLDIL + W + + T+L SIQ L+ EPNP+ PL Sbjct: 58 PERYPFEPPQVRFLTPIYHPNIDSSGRICLDILKLPPKGAWRPSLNIATVLTSIQLLMAEPNPDDPL 124
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBC21_ARATH (Probable ubiquitin carrier protein E2 21 OS=Arabidopsis thaliana GN=UBC21 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.275e-12 Identity = 38/88 (43.18%), Postives = 55/88 (62.50%), Query Frame = -3 Query: 315 YV*GFYHTNFSLRFPLDYPFKPPQVKFETMCFHPNVD-QYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNN 575 Y G + FS+ P YP +PPQV+F T FHPNV + G ICLDIL++ WS A+ +++ +I +L+ P P+SPLN + LL + Sbjct: 49 YEGGVFQLAFSV--PEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRS 134
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBE2T_HUMAN (Ubiquitin-conjugating enzyme E2 T OS=Homo sapiens GN=UBE2T PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.666e-12 Identity = 32/67 (47.76%), Postives = 44/67 (65.67%), Query Frame = -3 Query: 345 PLDYPFKPPQVKFETMCFHPNVDQYGNICLDIL----QDKWSSAYDCRTILLSIQSLLGEPNPESPL 533 P YPF+PPQ++F T +HPN+D G ICLD+L + W + + T+L SIQ L+ EPNP+ PL Sbjct: 58 PERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPL 124
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UB2R1_MOUSE (Ubiquitin-conjugating enzyme E2 R1 OS=Mus musculus GN=Cdc34 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.666e-12 Identity = 37/107 (34.58%), Postives = 58/107 (54.21%), Query Frame = -3 Query: 282 LRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDIL-------------QDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-------NNKEDYRKMVQKQ 542 L+FP+DYP+ PP +F T +HPN+ + G++C+ IL ++W+ + RTILLS+ SLL EPN SP N A+ + +Y +++KQ Sbjct: 62 LKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRKWKESKGKDREYTDIIRKQ 168 The following BLAST results are available for this feature:
BLAST of CN192062 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 188
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN192062 ID=CN192062; Name=CN192062; organism=Citrus sinensis; type=EST; length=637bpback to top |