CN192062
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBE2B_BOVIN (Ubiquitin-conjugating enzyme E2 B OS=Bos taurus GN=UBE2B PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 8.247e-20 Identity = 49/85 (57.65%), Postives = 58/85 (68.24%), Query Frame = -3 Query: 291 LRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMV 542 + F +YP KPP V+F + FHPNV G+ICLDILQ++WS YD +IL SIQSLL EPNP SP NS AA L NK +Y K V Sbjct: 57 IEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRV 141
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBC2_WHEAT (Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum GN=UBC2 PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.837e-19 Identity = 47/88 (53.41%), Postives = 62/88 (70.45%), Query Frame = -3 Query: 285 SLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLN-NKEDYRKMVQK 545 +L+F DYP KPP V+F + FHPN+ G+ICLDILQ++WS YD IL SIQSLL +PNP SP NS AA + + NK +Y + V++ Sbjct: 56 TLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSENKREYNRKVRE 143
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBC2_ARATH (Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana GN=UBC2 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.399e-19 Identity = 47/88 (53.41%), Postives = 62/88 (70.45%), Query Frame = -3 Query: 285 SLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLN-NKEDYRKMVQK 545 SL+F DYP KPP V+F + FHPN+ G+ICLDILQ++WS YD IL SIQSLL +PNP SP NS AA + + +K +Y + V++ Sbjct: 56 SLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSESKREYNRRVRE 143
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBCD6_DROME (Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=UbcD6 PE=2 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 3.134e-19 Identity = 47/87 (54.02%), Postives = 58/87 (66.67%), Query Frame = -3 Query: 288 SLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQ 545 ++ F +YP KPP V+F + FHPNV G ICLDILQ++WS YD IL SIQSLL +PNP SP NS AA L N+ +Y K V+ Sbjct: 56 TIEFTEEYPNKPPTVRFVSKVFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANSTAAQLYKENRREYEKRVK 142
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBC1_ARATH (Ubiquitin-conjugating enzyme E2 1 OS=Arabidopsis thaliana GN=UBC1 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.093e-19 Identity = 47/87 (54.02%), Postives = 61/87 (70.11%), Query Frame = -3 Query: 288 SLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLN-NKEDYRKMVQ 545 SL+F DYP KPP V+F + FHPN+ G+ICLDILQ++WS YD IL SIQSLL +PNP SP NS AA + + +K +Y + V+ Sbjct: 56 SLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRVR 142
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBC3_ARATH (Ubiquitin-conjugating enzyme E2 3 OS=Arabidopsis thaliana GN=UBC3 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 5.345e-19 Identity = 46/86 (53.49%), Postives = 60/86 (69.77%), Query Frame = -3 Query: 291 SLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLN-NKEDYRKMV 545 +L F DYP KPP V+F + FHPN+ G+ICLDILQ++WS YD +L SIQSLL +PNP+SP N+ AA L + NK +Y + V Sbjct: 56 TLHFTEDYPNKPPIVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAVLTSIQSLLCDPNPDSPANAEAARLFSENKREYNRKV 141
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBC2_CANGA (Ubiquitin-conjugating enzyme E2 2 OS=Candida glabrata GN=UBC2 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.653e-18 Identity = 47/87 (54.02%), Postives = 57/87 (65.52%), Query Frame = -3 Query: 285 LRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQK 542 L F DYP KPP VKF + FHPNV G ICLDILQ++W+ YD +IL SIQSL +PNP SP N AA L ++K Y K V++ Sbjct: 57 LEFDEDYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYIKRVKE 143
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBC2_DICDI (Ubiquitin-conjugating enzyme E2 2 OS=Dictyostelium discoideum GN=ubc2 PE=3 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 5.910e-18 Identity = 47/88 (53.41%), Postives = 59/88 (67.05%), Query Frame = -3 Query: 285 SLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQK 545 SL+F +YP P VKF + FHPNV G+ICLDILQ++WS YD IL SIQSLL +PNP SP NS +A L NK +Y + V++ Sbjct: 56 SLQFSEEYPNDAPTVKFLSKMFHPNVYADGSICLDILQNQWSPIYDIAAILTSIQSLLCDPNPNSPANSESARLFRENKREYNRKVKE 143
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBC29_ARATH (Ubiquitin carrier protein E2 29 OS=Arabidopsis thaliana GN=UBC29 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 5.910e-18 Identity = 40/67 (59.70%), Postives = 50/67 (74.63%), Query Frame = -3 Query: 345 SLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPL 545 ++ FP DYPFKPP+V F T FHPN++ GNICLDIL+D+WS A +LLSI SLL +PNP+ PL Sbjct: 53 NIHFPPDYPFKPPKVVFRTKVFHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPL 119
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBC2_YEAST (Ubiquitin-conjugating enzyme E2 2 OS=Saccharomyces cerevisiae GN=RAD6 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 7.719e-18 Identity = 46/87 (52.87%), Postives = 57/87 (65.52%), Query Frame = -3 Query: 285 LRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQK 542 L F +YP KPP VKF + FHPNV G ICLDILQ++W+ YD +IL SIQSL +PNP SP N AA L ++K Y K V++ Sbjct: 57 LEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKE 143 The following BLAST results are available for this feature:
BLAST of CN192062 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 188
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Sequences
The
following sequences are available for this feature:
EST sequence >CN192062 ID=CN192062; Name=CN192062; organism=Citrus sinensis; type=EST; length=637bpback to top |