CN192062
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBC2_CRYNE (Ubiquitin-conjugating enzyme E2 2 OS=Cryptococcus neoformans GN=UBC2 PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.246e-17 Identity = 44/88 (50.00%), Postives = 57/88 (64.77%), Query Frame = -3 Query: 285 SLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQK 545 +L F YP KPP V+F + FHPN+ G +CLDILQ++WS YD IL S+QSLL +PNP SP N AA L N ++Y + V+K Sbjct: 56 TLTFTDAYPNKPPTVRFISKMFHPNIYANGELCLDILQNRWSPTYDVAAILTSVQSLLNDPNPASPANVDAAQLFKENLKEYERRVKK 143
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBC11_ARATH (Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana GN=UBC11 PE=2 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 2.933e-17 Identity = 38/67 (56.72%), Postives = 51/67 (76.12%), Query Frame = -3 Query: 345 SLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPL 545 S+ FP DYPFKPP+V F+T +HPN++ G+ICLDIL+++WS A +LLSI SLL +PNP+ PL Sbjct: 53 SIHFPPDYPFKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 119
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBC4_YEAST (Ubiquitin-conjugating enzyme E2 4 OS=Saccharomyces cerevisiae GN=UBC4 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.831e-17 Identity = 38/67 (56.72%), Postives = 49/67 (73.13%), Query Frame = -3 Query: 345 SLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPL 545 S+ FP DYPFKPP++ F T +HPN++ GNICLDIL+D+WS A +LLSI SLL + NP+ PL Sbjct: 54 SIHFPTDYPFKPPKISFTTKIYHPNINANGNICLDILKDQWSPALTLSKVLLSICSLLTDANPDDPL 120
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBC2_YARLI (Ubiquitin-conjugating enzyme E2 2 OS=Yarrowia lipolytica GN=UBC2 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.831e-17 Identity = 43/86 (50.00%), Postives = 56/86 (65.12%), Query Frame = -3 Query: 288 LRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQ 542 L+F YP KPP VKF + FHPNV G +CLDILQ++WS YD IL S+QSLL +PN SP N A+ L ++++ Y K V+ Sbjct: 57 LQFDEQYPNKPPAVKFVSQMFHPNVYSSGELCLDILQNRWSPTYDVAAILTSVQSLLNDPNTSSPANVEASMLYKDHRQQYEKRVR 142
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBC28_ARATH (Ubiquitin carrier protein E2 28 OS=Arabidopsis thaliana GN=UBC28 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.831e-17 Identity = 39/67 (58.21%), Postives = 50/67 (74.63%), Query Frame = -3 Query: 345 SLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPL 545 ++ FP DYPFKPP+V F T FHPNV+ G+ICLDIL+++WS A +LLSI SLL +PNP+ PL Sbjct: 53 TIHFPPDYPFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 119
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBC1_MAGGR (Ubiquitin-conjugating enzyme E2-16 kDa OS=Magnaporthe grisea GN=UBC1 PE=3 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 3.831e-17 Identity = 37/67 (55.22%), Postives = 50/67 (74.63%), Query Frame = -3 Query: 345 SLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPL 545 ++ FP DYPFKPP+V F T +HPN++ G+ICLDIL+D+WS A +LLSI S+L +PNP+ PL Sbjct: 53 AIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSMLTDPNPDDPL 119
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBC1_COLGL (Ubiquitin-conjugating enzyme E2-16 kDa OS=Colletotrichum gloeosporioides GN=UBC1 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.831e-17 Identity = 37/67 (55.22%), Postives = 50/67 (74.63%), Query Frame = -3 Query: 345 SLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPL 545 ++ FP DYPFKPP+V F T +HPN++ G+ICLDIL+D+WS A +LLSI S+L +PNP+ PL Sbjct: 53 AIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSMLTDPNPDEPL 119
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBC12_ARATH (Probable ubiquitin-conjugating enzyme E2 12 OS=Arabidopsis thaliana GN=UBC12 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.831e-17 Identity = 44/88 (50.00%), Postives = 56/88 (63.64%), Query Frame = -3 Query: 285 SLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLN-NKEDYRKMVQK 545 S+ F DYPFKPP+V F+T +HPN+D G+ICLDIL+++WS A +LLSI SLL +PNP PL A L +K Y QK Sbjct: 54 SIDFSSDYPFKPPKVNFKTKVYHPNIDSKGSICLDILKEQWSPAPTTSKVLLSICSLLTDPNPNDPLVPEIAHLYKVDKSKYESTAQK 141
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UB2D3_RAT (Ubiquitin-conjugating enzyme E2 D3 OS=Rattus norvegicus GN=Ube2d3 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.831e-17 Identity = 39/89 (43.82%), Postives = 56/89 (62.92%), Query Frame = -3 Query: 279 SLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKEDYRKMVQKQY 545 ++ FP DYPFKPP+V F T +HPN++ G+ICLDIL+ +WS A +LLSI SLL +PNP+ PL A + D + +++ Sbjct: 53 TIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREW 141
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UB2D3_PONAB (Ubiquitin-conjugating enzyme E2 D3 OS=Pongo abelii GN=UBE2D3 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.831e-17 Identity = 39/89 (43.82%), Postives = 56/89 (62.92%), Query Frame = -3 Query: 279 SLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKEDYRKMVQKQY 545 ++ FP DYPFKPP+V F T +HPN++ G+ICLDIL+ +WS A +LLSI SLL +PNP+ PL A + D + +++ Sbjct: 53 TIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREW 141 The following BLAST results are available for this feature:
BLAST of CN192062 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 188
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN192062 ID=CN192062; Name=CN192062; organism=Citrus sinensis; type=EST; length=637bpback to top |