CN192062
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UB2D3_MOUSE (Ubiquitin-conjugating enzyme E2 D3 OS=Mus musculus GN=Ube2d3 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.831e-17 Identity = 39/89 (43.82%), Postives = 56/89 (62.92%), Query Frame = -3 Query: 279 SLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKEDYRKMVQKQY 545 ++ FP DYPFKPP+V F T +HPN++ G+ICLDIL+ +WS A +LLSI SLL +PNP+ PL A + D + +++ Sbjct: 53 TIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREW 141
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UB2D3_MACFA (Ubiquitin-conjugating enzyme E2 D3 OS=Macaca fascicularis GN=UBE2D3 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.831e-17 Identity = 39/89 (43.82%), Postives = 56/89 (62.92%), Query Frame = -3 Query: 279 SLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKEDYRKMVQKQY 545 ++ FP DYPFKPP+V F T +HPN++ G+ICLDIL+ +WS A +LLSI SLL +PNP+ PL A + D + +++ Sbjct: 53 TIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREW 141
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UB2D3_HUMAN (Ubiquitin-conjugating enzyme E2 D3 OS=Homo sapiens GN=UBE2D3 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.831e-17 Identity = 39/89 (43.82%), Postives = 56/89 (62.92%), Query Frame = -3 Query: 279 SLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKEDYRKMVQKQY 545 ++ FP DYPFKPP+V F T +HPN++ G+ICLDIL+ +WS A +LLSI SLL +PNP+ PL A + D + +++ Sbjct: 53 TIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREW 141
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UB2D2_PIG (Ubiquitin-conjugating enzyme E2 D2 OS=Sus scrofa GN=UBE2D2 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.831e-17 Identity = 39/89 (43.82%), Postives = 56/89 (62.92%), Query Frame = -3 Query: 279 SLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKEDYRKMVQKQY 545 ++ FP DYPFKPP+V F T +HPN++ G+ICLDIL+ +WS A +LLSI SLL +PNP+ PL A + D + +++ Sbjct: 53 TIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREW 141
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBC9_ARATH (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.003e-17 Identity = 38/67 (56.72%), Postives = 50/67 (74.63%), Query Frame = -3 Query: 345 SLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPL 545 ++ FP DYPFKPP+V F T FHPN++ G+ICLDIL+++WS A +LLSI SLL +PNP+ PL Sbjct: 53 TIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 119
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBC8_ARATH (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.003e-17 Identity = 38/67 (56.72%), Postives = 50/67 (74.63%), Query Frame = -3 Query: 345 SLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPL 545 ++ FP DYPFKPP+V F T FHPN++ G+ICLDIL+++WS A +LLSI SLL +PNP+ PL Sbjct: 53 TIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 119
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBC10_ARATH (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.003e-17 Identity = 38/67 (56.72%), Postives = 50/67 (74.63%), Query Frame = -3 Query: 345 SLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPL 545 ++ FP DYPFKPP+V F T FHPN++ G+ICLDIL+++WS A +LLSI SLL +PNP+ PL Sbjct: 53 TIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 119
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBE2N_RAT (Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus GN=Ube2n PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 6.534e-17 Identity = 41/78 (52.56%), Postives = 52/78 (66.67%), Query Frame = -3 Query: 309 LRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKE 542 L P +YP P+V+F T +HPNVD+ G ICLDIL+DKWS A RT+LLSIQ+LL PNP+ PL + A + E Sbjct: 56 LFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKSNE 133
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBCD1_DROME (Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=eff PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 6.534e-17 Identity = 40/88 (45.45%), Postives = 59/88 (67.05%), Query Frame = -3 Query: 285 SLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQK 545 ++ FP DYPFKPP+V F T +HPN++ G+ICLDIL+ +WS A +LLSI SLL +PNP+ PL A + ++E Y ++ ++ Sbjct: 53 TIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELARE 140
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBC12_MOUSE (NEDD8-conjugating enzyme Ubc12 OS=Mus musculus GN=Ube2m PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 6.534e-17 Identity = 44/103 (42.72%), Postives = 61/103 (59.22%), Query Frame = -3 Query: 270 GFYHTN---FSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQKQYFAG 566 GFY + FS + YP PP+VK ETM +HPN+D GN+CL+IL++ W +I+ +Q L EPNPE PLN AA +L NN+ + + VQ+ G Sbjct: 69 GFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGG 171 The following BLAST results are available for this feature:
BLAST of CN192062 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 188
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Sequences
The
following sequences are available for this feature:
EST sequence >CN192062 ID=CN192062; Name=CN192062; organism=Citrus sinensis; type=EST; length=637bpback to top |