CN192062
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBC12_HUMAN (NEDD8-conjugating enzyme Ubc12 OS=Homo sapiens GN=UBE2M PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 6.534e-17 Identity = 44/103 (42.72%), Postives = 61/103 (59.22%), Query Frame = -3 Query: 270 GFYHTN---FSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQKQYFAG 566 GFY + FS + YP PP+VK ETM +HPN+D GN+CL+IL++ W +I+ +Q L EPNPE PLN AA +L NN+ + + VQ+ G Sbjct: 69 GFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGG 171
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBC12_BOVIN (NEDD8-conjugating enzyme Ubc12 OS=Bos taurus GN=UBE2M PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 6.534e-17 Identity = 44/103 (42.72%), Postives = 61/103 (59.22%), Query Frame = -3 Query: 270 GFYHTN---FSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQKQYFAG 566 GFY + FS + YP PP+VK ETM +HPN+D GN+CL+IL++ W +I+ +Q L EPNPE PLN AA +L NN+ + + VQ+ G Sbjct: 69 GFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGG 171
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UB2D2_XENLA (Ubiquitin-conjugating enzyme E2 D2 OS=Xenopus laevis GN=ube2d2 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 6.534e-17 Identity = 40/88 (45.45%), Postives = 59/88 (67.05%), Query Frame = -3 Query: 285 SLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQK 545 ++ FP DYPFKPP+V F T +HPN++ G+ICLDIL+ +WS A +LLSI SLL +PNP+ PL A + ++E Y ++ ++ Sbjct: 53 TIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIARE 140
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UB2D2_RAT (Ubiquitin-conjugating enzyme E2 D2 OS=Rattus norvegicus GN=Ube2d2 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 6.534e-17 Identity = 40/88 (45.45%), Postives = 59/88 (67.05%), Query Frame = -3 Query: 285 SLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQK 545 ++ FP DYPFKPP+V F T +HPN++ G+ICLDIL+ +WS A +LLSI SLL +PNP+ PL A + ++E Y ++ ++ Sbjct: 53 TIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIARE 140
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UB2D2_MOUSE (Ubiquitin-conjugating enzyme E2 D2 OS=Mus musculus GN=Ube2d2 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 6.534e-17 Identity = 40/88 (45.45%), Postives = 59/88 (67.05%), Query Frame = -3 Query: 285 SLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQK 545 ++ FP DYPFKPP+V F T +HPN++ G+ICLDIL+ +WS A +LLSI SLL +PNP+ PL A + ++E Y ++ ++ Sbjct: 53 TIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIARE 140
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UB2D2_HUMAN (Ubiquitin-conjugating enzyme E2 D2 OS=Homo sapiens GN=UBE2D2 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 6.534e-17 Identity = 40/88 (45.45%), Postives = 59/88 (67.05%), Query Frame = -3 Query: 285 SLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQK 545 ++ FP DYPFKPP+V F T +HPN++ G+ICLDIL+ +WS A +LLSI SLL +PNP+ PL A + ++E Y ++ ++ Sbjct: 53 TIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIARE 140
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UB2D2_BOVIN (Ubiquitin-conjugating enzyme E2 D2 OS=Bos taurus GN=UBE2D2 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 6.534e-17 Identity = 40/88 (45.45%), Postives = 59/88 (67.05%), Query Frame = -3 Query: 285 SLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQK 545 ++ FP DYPFKPP+V F T +HPN++ G+ICLDIL+ +WS A +LLSI SLL +PNP+ PL A + ++E Y ++ ++ Sbjct: 53 TIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIARE 140
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBE2N_PONAB (Ubiquitin-conjugating enzyme E2 N OS=Pongo abelii GN=UBE2N PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 8.534e-17 Identity = 39/66 (59.09%), Postives = 48/66 (72.73%), Query Frame = -3 Query: 345 LRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPL 542 L P +YP P+V+F T +HPNVD+ G ICLDIL+DKWS A RT+LLSIQ+LL PNP+ PL Sbjct: 56 LFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL 121
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBE2N_MOUSE (Ubiquitin-conjugating enzyme E2 N OS=Mus musculus GN=Ube2n PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 8.534e-17 Identity = 39/66 (59.09%), Postives = 48/66 (72.73%), Query Frame = -3 Query: 345 LRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPL 542 L P +YP P+V+F T +HPNVD+ G ICLDIL+DKWS A RT+LLSIQ+LL PNP+ PL Sbjct: 56 LFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL 121
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBE2N_HUMAN (Ubiquitin-conjugating enzyme E2 N OS=Homo sapiens GN=UBE2N PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 8.534e-17 Identity = 39/66 (59.09%), Postives = 48/66 (72.73%), Query Frame = -3 Query: 345 LRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPL 542 L P +YP P+V+F T +HPNVD+ G ICLDIL+DKWS A RT+LLSIQ+LL PNP+ PL Sbjct: 56 LFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL 121 The following BLAST results are available for this feature:
BLAST of CN192062 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 188
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Sequences
The
following sequences are available for this feature:
EST sequence >CN192062 ID=CN192062; Name=CN192062; organism=Citrus sinensis; type=EST; length=637bpback to top |