CN192062
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBC2_CANAL (Ubiquitin-conjugating enzyme E2 2 OS=Candida albicans GN=UBC2 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.115e-16 Identity = 45/87 (51.72%), Postives = 56/87 (64.37%), Query Frame = -3 Query: 282 LRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKEDYRKMVQKQ 542 L F YP KPPQVKF + FHPNV G +CLDILQ++WS YD +IL S+QSLL +PN SP N AA N +D+R + K+ Sbjct: 57 LSFDEQYPNKPPQVKFISEMFHPNVYASGELCLDILQNRWSPTYDVSSILTSVQSLLNDPNISSPANVEAA---NLYKDHRSLYVKR 140
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UB2D4_HUMAN (Ubiquitin-conjugating enzyme E2 D4 OS=Homo sapiens GN=UBE2D4 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.115e-16 Identity = 40/88 (45.45%), Postives = 58/88 (65.91%), Query Frame = -3 Query: 285 SLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPL-NSYAAALLNNKEDYRKMVQK 545 ++ FP DYPFKPP+V F T +HPN++ G+ICLDIL+ +WS A +LLSI SLL +PNP+ PL A ++E Y ++ ++ Sbjct: 53 TIHFPTDYPFKPPKVAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPEIAHTYKADREKYNRLARE 140
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UB2D1_MOUSE (Ubiquitin-conjugating enzyme E2 D1 OS=Mus musculus GN=Ube2d1 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.115e-16 Identity = 40/84 (47.62%), Postives = 56/84 (66.67%), Query Frame = -3 Query: 297 SLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPL-NSYAAALLNNKEDYRK 545 ++ FP DYPFKPP++ F T +HPN++ G+ICLDIL+ +WS A +LLSI SLL +PNP+ PL A ++KE Y + Sbjct: 53 TVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNR 136
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UB2D1_HUMAN (Ubiquitin-conjugating enzyme E2 D1 OS=Homo sapiens GN=UBE2D1 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.115e-16 Identity = 40/84 (47.62%), Postives = 56/84 (66.67%), Query Frame = -3 Query: 297 SLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPL-NSYAAALLNNKEDYRK 545 ++ FP DYPFKPP++ F T +HPN++ G+ICLDIL+ +WS A +LLSI SLL +PNP+ PL A ++KE Y + Sbjct: 53 TVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNR 136
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UB2D1_BOVIN (Ubiquitin-conjugating enzyme E2 D1 OS=Bos taurus GN=UBE2D1 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.115e-16 Identity = 40/84 (47.62%), Postives = 56/84 (66.67%), Query Frame = -3 Query: 297 SLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPL-NSYAAALLNNKEDYRK 545 ++ FP DYPFKPP++ F T +HPN++ G+ICLDIL+ +WS A +LLSI SLL +PNP+ PL A ++KE Y + Sbjct: 53 TVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNR 136
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: U2D2B_RAT (Ubiquitin-conjugating enzyme E2 D2B OS=Rattus norvegicus GN=Ube2d2b PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.115e-16 Identity = 39/80 (48.75%), Postives = 53/80 (66.25%), Query Frame = -3 Query: 306 SLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKED 545 ++ FP +YPFKPP+V+F T +HPNV+ G+ICLDIL+ +WS A +LLSI SLL +PNP+ PL A + D Sbjct: 53 TIDFPTEYPFKPPKVEFTTRIYHPNVNSNGSICLDILRSQWSPALTISKVLLSISSLLCDPNPDDPLVPEIAQIYKTDRD 132
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: U2D2B_MOUSE (Ubiquitin-conjugating enzyme E2 D2B OS=Mus musculus GN=Ube2d2b PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.115e-16 Identity = 39/80 (48.75%), Postives = 53/80 (66.25%), Query Frame = -3 Query: 306 SLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKED 545 ++ FP +YPFKPP+V+F T +HPNV+ G+ICLDIL+ +WS A +LLSI SLL +PNP+ PL A + D Sbjct: 53 TIDFPTEYPFKPPKVEFTTRIYHPNVNSNGSICLDILRSQWSPALTISKVLLSISSLLCDPNPDDPLVPEIAQIYKTDRD 132
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBC2_DEBHA (Ubiquitin-conjugating enzyme E2 2 OS=Debaryomyces hansenii GN=UBC2 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.456e-16 Identity = 45/87 (51.72%), Postives = 57/87 (65.52%), Query Frame = -3 Query: 285 LRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQK 542 L+F YP KPP VKF + FHPNV G +CLDILQ++WS YD +IL SIQSLL +PN SP N AA L +++ Y K V++ Sbjct: 57 LQFDEQYPNKPPSVKFISEMFHPNVYASGELCLDILQNRWSPTYDVSSILTSIQSLLNDPNISSPANVEAANLYKDHRSQYIKRVRE 143
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBC12_XENTR (NEDD8-conjugating enzyme Ubc12 OS=Xenopus tropicalis GN=ube2m PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.456e-16 Identity = 44/103 (42.72%), Postives = 60/103 (58.25%), Query Frame = -3 Query: 270 GFYHTN---FSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQKQYFAG 566 GFY FS + YP PP+VK ETM +HPN+D GN+CL+IL++ W +I+ +Q L EPNPE PLN AA +L NN+ + + VQ+ G Sbjct: 69 GFYKGGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGG 171
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBC12_XENLA (NEDD8-conjugating enzyme Ubc12 OS=Xenopus laevis GN=ube2m PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.456e-16 Identity = 44/103 (42.72%), Postives = 60/103 (58.25%), Query Frame = -3 Query: 270 GFYHTN---FSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQKQYFAG 566 GFY FS + YP PP+VK ETM +HPN+D GN+CL+IL++ W +I+ +Q L EPNPE PLN AA +L NN+ + + VQ+ G Sbjct: 69 GFYKGGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGG 171 The following BLAST results are available for this feature:
BLAST of CN192062 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 188
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Sequences
The
following sequences are available for this feature:
EST sequence >CN192062 ID=CN192062; Name=CN192062; organism=Citrus sinensis; type=EST; length=637bpback to top |