CN192062
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UB2D3_BOVIN (Ubiquitin-conjugating enzyme E2 D3 OS=Bos taurus GN=UBE2D3 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.483e-16 Identity = 38/89 (42.70%), Postives = 55/89 (61.80%), Query Frame = -3 Query: 279 SLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKEDYRKMVQKQY 545 ++ FP DYPFKPP+V F T +HPN++ +ICLDIL+ +WS A +LLSI SLL +PNP+ PL A + D + +++ Sbjct: 53 TIHFPTDYPFKPPKVAFTTRIYHPNINSNDSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREW 141
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBC13_SCHPO (Ubiquitin-conjugating enzyme E2 13 OS=Schizosaccharomyces pombe GN=ubc13 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.235e-16 Identity = 41/89 (46.07%), Postives = 54/89 (60.67%), Query Frame = -3 Query: 309 YV*GFYHTNFSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKE 575 Y G +H L P +YP PP V+F T +HPNVD+ G ICL L+ WS A RT+LLSIQ+L+G PNP+ PL++ A + E Sbjct: 46 YEGGKFHLELFL--PDEYPMMPPNVRFLTKIYHPNVDKLGRICLSTLKKDWSPALQIRTVLLSIQALMGAPNPDDPLDNDVAKIWKENE 132
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBC13_YEAST (Ubiquitin-conjugating enzyme E2 13 OS=Saccharomyces cerevisiae GN=UBC13 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 5.532e-16 Identity = 39/79 (49.37%), Postives = 52/79 (65.82%), Query Frame = -3 Query: 309 LRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPL-NSYAAALLNNKE 542 L P DYP + P+V+F T +HPN+D+ G ICLD+L+ WS A RT+LLSIQ+LL PNP PL N A + N++ Sbjct: 56 LYLPDDYPMEAPKVRFLTKIYHPNIDRLGRICLDVLKTNWSPALQIRTVLLSIQALLASPNPNDPLANDVAEDWIKNEQ 134
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBC4_CANAL (Ubiquitin-conjugating enzyme E2 4 OS=Candida albicans GN=UBC4 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 7.224e-16 Identity = 40/83 (48.19%), Postives = 54/83 (65.06%), Query Frame = -3 Query: 297 SLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKEDYRK 545 S+ FP DYP KPP++ T +HPN++ GNICLDIL+D+WS A +LLSI SLL + NP+ PL A + K+D +K Sbjct: 53 SIHFPTDYPLKPPKIALTTKIYHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDANPDDPLVPEIAHIY--KQDRKK 133
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBC2_NEUCR (Ubiquitin-conjugating enzyme E2 2 OS=Neurospora crassa GN=mus-8 PE=3 SV=3) HSP 1 Score: 83.9593 bits (206), Expect = 7.224e-16 Identity = 42/87 (48.28%), Postives = 56/87 (64.37%), Query Frame = -3 Query: 285 LRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQK 542 + F YP KPP VKF + FHPNV G +CLDILQ++WS YD +L SIQSLL +PN S N A+ L +N+++Y K V++ Sbjct: 57 MHFEEQYPNKPPSVKFISEMFHPNVYATGELCLDILQNRWSPTYDVAAVLTSIQSLLNDPNTGSRANVEASNLYKDNRKEYHKRVRE 143
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBC1_SCHPO (Ubiquitin-conjugating enzyme E2 1 OS=Schizosaccharomyces pombe GN=ubc1 PE=2 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 2.102e-15 Identity = 42/99 (42.42%), Postives = 62/99 (62.63%), Query Frame = -3 Query: 303 RGWKGNYV*GFYHTNFSLRFPLDYPFKPPQVKFETMCFHPNVD-QYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAAL-LNNKEDY 593 RG +G G Y + P+DYPF+PP++ F+T +HPNV Q G ICLDIL+D+WS Y ++ L+S+QSLL P P +P ++ A + L N + + Sbjct: 41 RGPEGTPYEGGYFV-VDIEIPIDYPFRPPKMNFDTKIYHPNVSSQTGAICLDILKDQWSPVYTMKSALISLQSLLCTPEPSNPQDAQVAQVYLQNYQQF 138
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBC12_DROME (NEDD8-conjugating enzyme Ubc12 OS=Drosophila melanogaster GN=CG7375 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.102e-15 Identity = 41/103 (39.81%), Postives = 60/103 (58.25%), Query Frame = -3 Query: 270 GFYHTN---FSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQKQYFAG 566 GFY F+ R +YP +PP+VK T +HPN+D GN+CL+IL++ W+ + +I+ +Q L EPNPE PLN AA +L N+ + V+K G Sbjct: 66 GFYRDGRFVFNFRVGSNYPHEPPKVKCATQVYHPNIDLDGNVCLNILREDWNPVLNINSIVYGLQFLFLEPNPEDPLNKEAADVLQTNRRQFENNVKKAMRGG 168
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBC14_SCHPO (Ubiquitin-conjugating enzyme E2 14 OS=Schizosaccharomyces pombe GN=ubc14 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.683e-15 Identity = 43/98 (43.88%), Postives = 60/98 (61.22%), Query Frame = -3 Query: 288 YV*GFYHTNFSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDIL-QDKWSSAYDCRTILLSIQSLLGEPNPESPL-NSYAAALLNNKEDYRKMVQ 575 Y G +H FSL+FPLDYPF+PP ++F T +HPN D GN+CL IL Q + + R++L I LL EPNP+ PL S A N++ + K+ + Sbjct: 51 YAGGKFH--FSLKFPLDYPFQPPTIEFTTRIYHPNFDSEGNVCLAILKQQVFKPSIKLRSVLEQILQLLREPNPDDPLVASIAEQYRNDRPSFDKIAR 146
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBC12_YEAST (NEDD8-conjugating enzyme UBC12 OS=Saccharomyces cerevisiae GN=UBC12 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.362e-14 Identity = 42/106 (39.62%), Postives = 62/106 (58.49%), Query Frame = -3 Query: 261 GFYH---TNFSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQKQYFAGEFE 566 G+Y+ NF+L F YP +PP+V FHPN+D GN+CL+IL++ WS A D ++I+ + L EPNP PLN AA LL ++++ + V+ G E Sbjct: 73 GYYNYGSINFNLDFNEVYPIEPPKVVCLKKIFHPNIDLKGNVCLNILREDWSPALDLQSIITGLLFLFLEPNPNDPLNKDAAKLLCEGEKEFAEAVRLTMSGGSIE 178
BLAST of CN192062 vs. ExPASy Swiss-Prot
Match: UBC12_DICDI (NEDD8-conjugating enzyme Ubc12 OS=Dictyostelium discoideum GN=ube2m PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.362e-14 Identity = 34/94 (36.17%), Postives = 58/94 (61.70%), Query Frame = -3 Query: 270 FSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAAL-LNNKEDYRKMVQKQYFAG 548 F++ P YP+ PP+V +T+ +HPN+D G++CL+IL+ W + T++ + +L EPNP+ PLN AA L ++NK+ + V++ G Sbjct: 126 FTINIPSTYPYDPPKVHCDTLVYHPNIDLEGHVCLNILRQDWMPVLNIGTVIFGLMTLFLEPNPDDPLNKDAAQLMIDNKKTFEANVRQSLRGG 219 The following BLAST results are available for this feature:
BLAST of CN192062 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 188
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Sequences
The
following sequences are available for this feature:
EST sequence >CN192062 ID=CN192062; Name=CN192062; organism=Citrus sinensis; type=EST; length=637bpback to top |