CN192058

Overview
NameCN192058
Unique NameCN192058
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length637
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN192058 vs. ExPASy Swiss-Prot
Match: CYSD_SCHPO (O-acetylhomoserine (thiol)-lyase OS=Schizosaccharomyces pombe GN=SPBC428.11 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.016e-25
Identity = 72/243 (29.63%), Postives = 120/243 (49.38%), Query Frame = 1
Query:   16 VSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL------------------------VTQIRNLHHV----------LGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQXM-TGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSPSERLKYGIMDNLVRFSFGV 636
            ++++ H  G  + +D TF       + +  GAD+V HSATK+IGGH   + G I  SGK                              NL +           +GG  NP   +L+++G++TL LR+++    A  +A+ LE HPKV  V YPGL+SH  H +A + +  G+G V+SF   G    + K ++ALK+     + G  +++V  PA  ++  L+  E++  G+  +L+R + G+
Sbjct:  170 IAEVAHAAGVPLMVDNTFGGGGYLVRPIDHGADIVTHSATKWIGGHGTTIGGVIVDSGKFDWKKNSKRFPEFNEPHPGYHGMVFTETFGNLAYAFACRTQTLRDVGGNANPFGVFLLLQGLETLSLRMERHVQNAFALAKYLEKHPKVNWVSYPGLESHVSHKLAKKYLKNGYGAVLSFGAKGGPDQSRKVVNALKLASQLANVGDAKTLVIAPAYTTHLQLTDEEQISAGVTKDLIRVAVGI 412          
BLAST of CN192058 vs. ExPASy Swiss-Prot
Match: MET17_YEAST (Protein MET17 OS=Saccharomyces cerevisiae GN=MET17 PE=1 SV=3)

HSP 1 Score: 112.079 bits (279), Expect = 2.502e-24
Identity = 78/250 (31.20%), Postives = 120/250 (48.00%), Query Frame = 1
Query:   25 LCHKKGAIVCIDGTF-ATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL---------------------------------VTQIRN-LHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQXMT-GFGGVVSF----------EVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSPSERLKYGIMDNLVRFSFGV 636
            + HK G  V +D TF A     + +  GAD+V HSATK+IGGH   + G I  SGK                                  +  +R  L   LG  +NP A++L+++G++TL LR ++    AL++A+ LE  P V  V YPGL SH  H  A + ++ GFGGV+SF          E D    +  + +D LK+     + G  +++V  P   ++  L+  E+L  G+  +L+R S G+
Sbjct:  172 IAHKHGIPVVVDNTFGAGGYFCQPIKYGADIVTHSATKWIGGHGTTIGGIIVDSGKFPWKDYPEKFPQFSQPAEGYHGTIYNEAYGNLAYIVHVRTELLRDLGPLMNPFASFLLLQGVETLSLRAERHGENALKLAKWLEQSPYVSWVSYPGLASHSHHENAKKYLSNGFGGVLSFGVKDLPNADKETDPFKLSGAQVVDNLKLASNLANVGDAKTLVIAPYFTTHKQLNDKEKLASGVTKDLIRVSVGI 421          
BLAST of CN192058 vs. ExPASy Swiss-Prot
Match: MET17_KLULA (Protein MET17 OS=Kluyveromyces lactis GN=MET17 PE=3 SV=3)

HSP 1 Score: 109.768 bits (273), Expect = 1.242e-23
Identity = 79/249 (31.73%), Postives = 119/249 (47.79%), Query Frame = 1
Query:   25 LCHKKGAIVCIDGTF-ATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL---------------------------------VTQIRN-LHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQXM-TGFGGVVSF----------EVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSPSERLKYGIMDNLVRFSFG 633
            + HK G  V +D TF A     + +  GAD+V HSATK+IGGH   + G I  SGK                                  +  +R  L   LG  L+P A +L+++G++TL LR ++  S AL++A+ LE+ P V  V YPGL SH  H  A + +  GFGGV+SF          E D    +  + +D LK+     + G  +++V  P   ++  L+  E+L  G+  +L+R S G
Sbjct:  171 VAHKHGIPVVVDNTFGAGGFFCQPIKYGADIVTHSATKWIGGHGVTVGGVIIDSGKFPWKDYPEKFPQFSQPSEGYHGLIFNDAFGPAAFIGHVRTELLRDLGPVLSPFAGFLLLQGLETLSLRGERHGSNALKLAQYLESSPYVSWVSYPGLPSHSHHENAKKYLENGFGGVLSFGVKDLPNASEESDPFKASGAQVVDNLKLASNLANVGDSKTLVIAPYFTTHQQLTDEEKLASGVTKDLIRVSVG 419          
BLAST of CN192058 vs. ExPASy Swiss-Prot
Match: METC_HAEIN (Cystathionine beta-lyase OS=Haemophilus influenzae GN=metC PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.518e-21
Identity = 58/200 (29.00%), Postives = 118/200 (59.00%), Query Frame = 1
Query:   46 IVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQXMTGFGGVVSFEVDGDLTA--TIKFIDALKIPYIAPSFGGCESIV--DQPAIMSYWDLSPSERLKYGIMDNLVRFSFG 633
            ++ ID T++  +  KAL    D+ + + TK++ GH+D++ G+   + +   Q+R   +++G  ++ ++AY   RG++TL +R++Q   +++++A+ L   P+VK V++P L S P H    +  +G  G+ SFE+   LT+    KF+D  ++  +A S+GG ES++  +QP  +++  + P+  +K  +  +L+R   G
Sbjct:  182 VIMIDNTWSAGVLFKALEHDIDISIQAGTKYLVGHSDIMIGTAVANARTWDQLREHSYLMGQMVDADSAYTTARGIRTLGVRLKQHQESSIKVAKWLSEQPEVKTVYHPALPSCPGHEFFLRDFSGSSGLFSFELTQRLTSEQVSKFMDHFQLFAMAYSWGGFESLILCNQPEEIAH--IRPN--IKRNLTGSLIRVHIG 377          
BLAST of CN192058 vs. ExPASy Swiss-Prot
Match: METC_ECOLI (Cystathionine beta-lyase metC OS=Escherichia coli (strain K12) GN=metC PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.417e-21
Identity = 54/168 (32.14%), Postives = 98/168 (58.33%), Query Frame = 1
Query:   43 AIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQXMTGFGGVVSFEVDGDLT--ATIKFIDALKIPYIAPSFGGCESIV 540
            AI+ ID T+A  +  KAL  G D+ + +ATK++ GH+D + G+   + +   Q+R   +++G  ++ + AY+  RG++TL +R++Q + ++L++AE L  HP+V RV++P L     H    +  TG  G+ SF +   L       ++D   +  +A S+GG ES++
Sbjct:  180 AIIMIDNTWAAGVLFKALDFGIDVSIQAATKYLVGHSDAMIGTAVCNARCWEQLRENAYLMGQMVDADTAYITSRGLRTLGVRLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLNNEELANYLDNFSLFSMAYSWGGYESLI 347          
BLAST of CN192058 vs. ExPASy Swiss-Prot
Match: CBL_SCHPO (Cystathionine beta-lyase OS=Schizosaccharomyces pombe GN=str3 PE=2 SV=4)

HSP 1 Score: 98.2117 bits (243), Expect = 3.739e-20
Identity = 57/201 (28.36%), Postives = 106/201 (52.74%), Query Frame = 1
Query:   37 KGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSI-SGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQXMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSPSERLKYGIMDNLVRFSFGV 636
            K A++ +D T  +P+    L  G D+V  SATK++ GH+D++ G I + S ++   +    + +G A+ P   +L++RG+KT+ LRV++    A+ +A+ L++  K  +V++PGL    +            G V     GD+  +   ++  K+  I+ SFG   S++  PA MS+  +    R   G+ ++L+R   G+
Sbjct:  170 KDALLVMDNTMLSPVLCNPLDFGYDIVYESATKYLSGHHDLMGGVIATKSDEIAKSVFFNINAMGAAMAPFECFLLLRGIKTMGLRVERAQQNAIEIAKFLKS--KGLQVNFPGLDPDAKSTAIFYSFARGPGAVMSVFTGDVEVSKTIVNTTKLFEISVSFGAVNSLISMPAYMSHASIKKEVRDARGLSEDLIRICVGI 368          
BLAST of CN192058 vs. ExPASy Swiss-Prot
Match: METC_SALTY (Cystathionine beta-lyase OS=Salmonella typhimurium GN=metC PE=3 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 4.883e-20
Identity = 52/168 (30.95%), Postives = 96/168 (57.14%), Query Frame = 1
Query:   43 AIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQXMTGFGGVVSFEVDGDLTAT--IKFIDALKIPYIAPSFGGCESIV 540
            A++ ID T+A  +  KAL    D+ + + TK++ GH+D + G+   + +   Q+R   +++G  L+ + AY+  RG++TL +R++Q   ++L++A  L  HP+V RV++P L     H    +  TG  G+ SF ++  LT      ++D   +  +A S+GG ES++
Sbjct:  180 AVIMIDNTWAAGVLFKALEFDIDISIQAGTKYLIGHSDAMVGTAVANARCWEQLRENAYLMGQMLDADTAYMTSRGLRTLGVRLRQHQESSLKIAAWLANHPQVARVNHPALPGSKGHAFWKRDFTGSSGLFSFVLNKKLTEAELSAYLDNFSLFSMAYSWGGYESLI 347          
BLAST of CN192058 vs. ExPASy Swiss-Prot
Match: STR3_YEAST (Cystathionine beta-lyase OS=Saccharomyces cerevisiae GN=STR3 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.399e-19
Identity = 63/216 (29.17%), Postives = 110/216 (50.93%), Query Frame = 1
Query:   28 CHKKGAIVCIDGTFATPLNQKALSL--GADLVLHSATKFIGGHNDVLAGSI-SGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILE--------AHPKVKRVHYPGLKSHPEHHIATQXMTGFGGVVSFEVDGDLTATIKFIDALKIPY--IAPSFGGCESIVDQPAIMSYWDLSPSERLKYGIMDNLVRFSFGV 636
            C      V +D T  + LN   L L  G D+V  SATK++ GH+D++ G I S + ++ +++  + +  G  L+P  ++L++RG+KTL +R+ QQ   A+ +A  LE           K  +  + GL+S+P+  +      G G V+SFE  G    + + + + K+    +  SFG   S++  P  MS+  + P  R +    ++LVR   G+
Sbjct:  176 CISPDTTVVVDNTMMSGLNCNPLQLNPGCDVVYESATKYLNGHHDLMGGVIISKTPEIASKLYFVINSTGAGLSPMDSWLLVRGLKTLGVRLYQQQRNAMILAHWLENSCGFKPTRTNKATKTRFVGLRSNPDFKLHKSFNNGPGAVLSFET-GSFEHSKRLVSSKKLSIWAVTVSFGCVNSLLSMPCKMSHASIDPELRKERDFPEDLVRLCCGI 390          
BLAST of CN192058 vs. ExPASy Swiss-Prot
Match: METC_BORAV (Cystathionine beta-lyase OS=Bordetella avium GN=metC PE=1 SV=3)

HSP 1 Score: 89.7373 bits (221), Expect = 1.330e-17
Identity = 55/203 (27.09%), Postives = 109/203 (53.69%), Query Frame = 1
Query:   46 IVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQ-IRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQXMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVD-----QPAIMSYWDLSPSERLKYGIMDNLVRFSFGV 636
            I+  D T+ +    + L+LGA + + + TK++GGH+D++ G++  + + + + +    + LG +++ + A+L +RG++T+ +R+ Q    AL + E L+  P+V R+++P   + P H +  +  +G  G+++ ++     A   F++AL +  I  S+GG ES+V      + A   YW          G  D LVR   G+
Sbjct:  185 ILATDNTWGSGYIYRPLTLGAQVSVIAGTKYVGGHSDLMLGAVVTNDEAIAKRLNRTQYALGYSVSADDAWLALRGVRTMPVRMAQHARHALEVCEFLQNRPEVVRLYHPAWPADPGHALWQRDCSGSNGMLAVQLGLSPQAARDFVNALTLFGIGFSWGGFESLVQLVTPGELARHQYWQ---------GGSDALVRLHIGL 378          
BLAST of CN192058 vs. ExPASy Swiss-Prot
Match: YHR2_YEAST (Uncharacterized trans-sulfuration enzyme YHR112C OS=Saccharomyces cerevisiae GN=YHR112C PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.278e-16
Identity = 56/183 (30.60%), Postives = 102/183 (55.74%), Query Frame = 1
Query:   31 HKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVT-QIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPK-----VKRVHYPGLKSHPEHHIATQXMTGFGGVVSFEVDGDLTATIKFIDALKIPYI--APSFGGCESIVDQPAI 555
            H KGA++ +D TFA+P  Q A + GAD+VL+SATK+ GGH+D+L+G +    +  + Q+++    LG  +    +++++R ++T  +R+ +Q+  A ++   L  H       +K +++  L++  E  +  Q + G+G V  F +        K +  LK+ Y   A S GG ES+V+  A+
Sbjct:  164 HAKGALLIVDSTFASPPLQYAWNFGADIVLYSATKYFGGHSDLLSGVLVVKEEATSRQLKDDRIYLGTNVANLESFMLLRSLRTYEMRITKQSENATKLVRFLSDHQSEFDKVLKTIYHSSLQT--EEFVKKQLVGGYGPV--FAITLYTKEQCKQL-PLKLKYFHHATSLGGIESLVEWRAM 341          
The following BLAST results are available for this feature:
BLAST of CN192058 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
CYSD_SCHPO1.016e-2529.63O-acetylhomoserine (thiol)-lyase OS=Schizosaccharo... [more]
MET17_YEAST2.502e-2431.20Protein MET17 OS=Saccharomyces cerevisiae GN=MET17... [more]
MET17_KLULA1.242e-2331.73Protein MET17 OS=Kluyveromyces lactis GN=MET17 PE=... [more]
METC_HAEIN1.518e-2129.00Cystathionine beta-lyase OS=Haemophilus influenzae... [more]
METC_ECOLI4.417e-2132.14Cystathionine beta-lyase metC OS=Escherichia coli ... [more]
CBL_SCHPO3.739e-2028.36Cystathionine beta-lyase OS=Schizosaccharomyces po... [more]
METC_SALTY4.883e-2030.95Cystathionine beta-lyase OS=Salmonella typhimurium... [more]
STR3_YEAST5.399e-1929.17Cystathionine beta-lyase OS=Saccharomyces cerevisi... [more]
METC_BORAV1.330e-1727.09Cystathionine beta-lyase OS=Bordetella avium GN=me... [more]
YHR2_YEAST4.278e-1630.60Uncharacterized trans-sulfuration enzyme YHR112C O... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0006E13_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006E13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192058 ID=CN192058; Name=CN192058; organism=Citrus sinensis; type=EST; length=637bp
GCGAGGGTCAAACTGGTTTCAGATCTTTGCCATAAGAAAGGAGCAATAGT
TTGCATAGATGGAACCTTTGCCACACCTCTCAATCAGAAGGCCCTCAGCC
TTGGTGCTGATCTTGTCCTGCACTCTGCAACAAAATTCATTGGTGGCCAC
AATGATGTCCTTGCTGGGAGCATTAGTGGTTCAGGGAAGTTAGTTACACA
AATTCGTAATTTGCATCATGTTTTGGGTGGTGCTCTCAACCCGAATGCCG
CATATTTGATCATTCGAGGCATGAAGACATTGCATCTTCGTGTACAGCAA
CAAAATTCAACTGCGTTGAGGATGGCCGAGATTTTAGAGGCACATCCAAA
GGTGAAGCGCGTTCACTATCCAGGCTTGAAGAGTCATCCTGAGCATCACA
TTGCCACACAGCANATGACTGGTTTTGGTGGGGTAGTTAGTTTTGAGGTG
GATGGAGACCTAACGGCCACCATAAAATTTATTGATGCCTTGAAAATCCC
ATATATTGCTCCATCCTTCGGTGGCTGTGAGAGCATTGTTGATCAGCCAG
CTATAATGTCGTATTGGGACCTTAGCCCATCGGAGAGGCTCAAGTATGGG
ATTATGGATAACTTGGTTCGCTTTAGCTTTGGAGTGG
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