CN192056

Overview
NameCN192056
Unique NameCN192056
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN192056 vs. ExPASy Swiss-Prot
Match: UCP2_BOVIN (Mitochondrial uncoupling protein 2 OS=Bos taurus GN=UCP2 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.385e-26
Identity = 67/151 (44.37%), Postives = 93/151 (61.59%), Query Frame = 2
Query:  236 EICTIPLDTAKVRLQLQ-KKAVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTLYV-GKDFVGDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYFTL*NRKDLR 682
            ++ T PLDTAKVRLQ+Q ++       A  +Y+G+LGT+ T+ R EG  SL+ G+V GL RQ  F  +RIGLY+ VK  Y  G +  G   +  ++LAG TTGAL + +A PTD+VKVR QA+ +   G  RRY   + AY T+   +  R
Sbjct:   28 DLITFPLDTAKVRLQIQGERQGPMQAAASAQYRGVLGTILTMVRTEGPRSLYSGLVAGLQRQMSFASVRIGLYDSVKQFYTKGSEHAG---IGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQAR--AGAGRRYQSTVEAYKTIAREEGFR 173          
BLAST of CN192056 vs. ExPASy Swiss-Prot
Match: UCP2_RAT (Mitochondrial uncoupling protein 2 OS=Rattus norvegicus GN=Ucp2 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.115e-26
Identity = 67/151 (44.37%), Postives = 94/151 (62.25%), Query Frame = 2
Query:  236 EICTIPLDTAKVRLQLQKKAVA-GDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTLYV-GKDFVGDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYFTL*NRKDLR 682
            ++ T PLDTAKVRLQ+Q ++       A  +Y+G+LGT+ T+ R EG  SL+ G+V GL RQ  F  +RIGLY+ VK  Y  G +  G   +  ++LAG TTGAL + +A PTD+VKVR QA+ +   G  RRY   + AY T+   + +R
Sbjct:   28 DLITFPLDTAKVRLQIQGESQGLARTAASAQYRGVLGTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGSEHAG---IGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGG--RRYQSTVEAYKTIAREEGIR 173          
BLAST of CN192056 vs. ExPASy Swiss-Prot
Match: UCP2_PONAB (Mitochondrial uncoupling protein 2 OS=Pongo abelii GN=UCP2 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.939e-26
Identity = 66/151 (43.71%), Postives = 93/151 (61.59%), Query Frame = 2
Query:  236 EICTIPLDTAKVRLQLQKKAVAG-DGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTLYV-GKDFVGDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYFTL*NRKDLR 682
            ++ T PLDTAKVRLQ+Q ++       A  +Y+G++GT+ T+ R EG  SL+ G+V GL RQ  F  +RIGLY+ VK  Y  G +      +  ++LAG TTGAL + +A PTD+VKVR QA+ +   G  RRY   +NAY T+   +  R
Sbjct:   28 DLITFPLDTAKVRLQIQGESQGPVHATASAQYRGVMGTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGSEHAS---IGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGG--RRYQSTVNAYKTIAREEGFR 173          
BLAST of CN192056 vs. ExPASy Swiss-Prot
Match: UCP2_MOUSE (Mitochondrial uncoupling protein 2 OS=Mus musculus GN=Ucp2 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.939e-26
Identity = 67/151 (44.37%), Postives = 94/151 (62.25%), Query Frame = 2
Query:  236 EICTIPLDTAKVRLQLQKKAVA-GDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTLYV-GKDFVGDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYFTL*NRKDLR 682
            ++ T PLDTAKVRLQ+Q ++       A  +Y+G+LGT+ T+ R EG  SL+ G+V GL RQ  F  +RIGLY+ VK  Y  G +  G   +  ++LAG TTGAL + +A PTD+VKVR QA+ +   G  RRY   + AY T+   + +R
Sbjct:   28 DLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGSEHAG---IGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGG--RRYQSTVEAYKTIAREEGIR 173          
BLAST of CN192056 vs. ExPASy Swiss-Prot
Match: UCP2_HUMAN (Mitochondrial uncoupling protein 2 OS=Homo sapiens GN=UCP2 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.063e-26
Identity = 66/151 (43.71%), Postives = 93/151 (61.59%), Query Frame = 2
Query:  236 EICTIPLDTAKVRLQLQKKAVAG-DGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTLYV-GKDFVGDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYFTL*NRKDLR 682
            ++ T PLDTAKVRLQ+Q ++       A  +Y+G++GT+ T+ R EG  SL+ G+V GL RQ  F  +RIGLY+ VK  Y  G +      +  ++LAG TTGAL + +A PTD+VKVR QA+ +   G  RRY   +NAY T+   +  R
Sbjct:   28 DLITFPLDTAKVRLQIQGESQGPVRATASAQYRGVMGTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGSEHAS---IGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGG--RRYQSTVNAYKTIAREEGFR 173          
BLAST of CN192056 vs. ExPASy Swiss-Prot
Match: UCP1_RABIT (Mitochondrial brown fat uncoupling protein 1 OS=Oryctolagus cuniculus GN=UCP1 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.444e-25
Identity = 64/140 (45.71%), Postives = 89/140 (63.57%), Query Frame = 2
Query:  236 EICTIPLDTAKVRLQLQKKAVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTLYVGKDFVGDVP-LSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAY 652
            ++ T PLDTAKVR Q+Q +     G+   +YKG+LGT+ T+A+ EG + L+ G+  GL RQ  F  LRIGLY+ V+  +   +   + P L  KI AGLTTG + + I  PT++VKVRLQA+  L  G+  RY+G  NAY
Sbjct:   28 DVITFPLDTAKVRQQIQGEFPITSGI---RYKGVLGTITTLAKTEGPLKLYSGLPAGLQRQISFASLRIGLYDTVQEFFTSGE---ETPSLGSKISAGLTTGGVAVFIGQPTEVVKVRLQAQSHL-HGLKPRYTGTYNAY 160          
BLAST of CN192056 vs. ExPASy Swiss-Prot
Match: UCP2_CANFA (Mitochondrial uncoupling protein 2 OS=Canis familiaris GN=UCP2 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.498e-25
Identity = 66/151 (43.71%), Postives = 93/151 (61.59%), Query Frame = 2
Query:  236 EICTIPLDTAKVRLQLQ-KKAVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTLYV-GKDFVGDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYFTL*NRKDLR 682
            ++ T PLDTAKVRLQ+Q ++       A  +Y+G+L T+ T+ R EG  SL+ G+V GL RQ  F  +RIGLY+ VK  Y  G +  G   +  ++LAG TTGAL + +A PTD+VKVR QA+ +   G  RRY   ++AY T+   +  R
Sbjct:   28 DLITFPLDTAKVRLQIQGERQGPVRAAASAQYRGVLCTILTMVRTEGPRSLYSGLVAGLQRQMSFASVRIGLYDSVKQFYTKGSEHAG---IGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGSG--RRYQSTVDAYKTIAREEGFR 173          
BLAST of CN192056 vs. ExPASy Swiss-Prot
Match: UCP1_RAT (Mitochondrial brown fat uncoupling protein 1 OS=Rattus norvegicus GN=Ucp1 PE=1 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 4.498e-25
Identity = 63/139 (45.32%), Postives = 86/139 (61.87%), Query Frame = 2
Query:  236 EICTIPLDTAKVRLQLQKKAVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTLYVGKDFVGDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAY 652
            +I T PLDTAKVRLQ+Q +  A   +   +YKG+LGT+ T+A+ EG+  L+ G+  G+ RQ  F  LRIGLY+ V+  Y          L  KI AGL TG + + I  PT++VKVR+QA+  L  G+  RY+G  NAY
Sbjct:   28 DIITFPLDTAKVRLQIQGEGQASSTI---RYKGVLGTITTLAKTEGLPKLYSGLPAGIQRQISFASLRIGLYDTVQE-YFSSGRETPASLGSKISAGLMTGGVAVFIGQPTEVVKVRMQAQSHL-HGIKPRYTGTYNAY 161          
BLAST of CN192056 vs. ExPASy Swiss-Prot
Match: UCP1_MOUSE (Mitochondrial brown fat uncoupling protein 1 OS=Mus musculus GN=Ucp1 PE=2 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 4.498e-25
Identity = 63/139 (45.32%), Postives = 86/139 (61.87%), Query Frame = 2
Query:  236 EICTIPLDTAKVRLQLQKKAVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTLYVGKDFVGDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAY 652
            +I T PLDTAKVRLQ+Q +  A   +   +YKG+LGT+ T+A+ EG+  L+ G+  G+ RQ  F  LRIGLY+ V+  Y          L  KI AGL TG + + I  PT++VKVR+QA+  L  G+  RY+G  NAY
Sbjct:   28 DIITFPLDTAKVRLQIQGEGQASSTI---RYKGVLGTITTLAKTEGLPKLYSGLPAGIQRQISFASLRIGLYDSVQE-YFSSGRETPASLGNKISAGLMTGGVAVFIGQPTEVVKVRMQAQSHL-HGIKPRYTGTYNAY 161          
BLAST of CN192056 vs. ExPASy Swiss-Prot
Match: UCP1_SUNMU (Mitochondrial brown fat uncoupling protein 1 OS=Suncus murinus GN=UCP1 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.672e-25
Identity = 66/142 (46.48%), Postives = 87/142 (61.27%), Query Frame = 2
Query:  236 EICTIPLDTAKVRLQLQKKAVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTLYVGKDFVGDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYFTL 661
            +I T PLDTAKVRLQ+Q +     GV   KYKG+LGT+AT+A+ EG + L+ G+  G+ RQ  F  LRIGLY+ V+  Y          L  KI AGL TG + + I  PT++ KVR+QA+  L    P RYSG  NAY+ +
Sbjct:   29 DIITFPLDTAKVRLQVQGERPNAPGV---KYKGVLGTIATVAKTEGPLKLYGGLPAGIQRQISFASLRIGLYDTVQE-YFNAHRKTPATLGNKISAGLMTGCVTVFIGQPTEVAKVRMQAQSSLHWLKP-RYSGTYNAYYVI 165          
The following BLAST results are available for this feature:
BLAST of CN192056 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
UCP2_BOVIN2.385e-2644.37Mitochondrial uncoupling protein 2 OS=Bos taurus G... [more]
UCP2_RAT3.115e-2644.37Mitochondrial uncoupling protein 2 OS=Rattus norve... [more]
UCP2_PONAB6.939e-2643.71Mitochondrial uncoupling protein 2 OS=Pongo abelii... [more]
UCP2_MOUSE6.939e-2644.37Mitochondrial uncoupling protein 2 OS=Mus musculus... [more]
UCP2_HUMAN9.063e-2643.71Mitochondrial uncoupling protein 2 OS=Homo sapiens... [more]
UCP1_RABIT3.444e-2545.71Mitochondrial brown fat uncoupling protein 1 OS=Or... [more]
UCP2_CANFA4.498e-2543.71Mitochondrial uncoupling protein 2 OS=Canis famili... [more]
UCP1_RAT4.498e-2545.32Mitochondrial brown fat uncoupling protein 1 OS=Ra... [more]
UCP1_MOUSE4.498e-2545.32Mitochondrial brown fat uncoupling protein 1 OS=Mu... [more]
UCP1_SUNMU7.672e-2546.48Mitochondrial brown fat uncoupling protein 1 OS=Su... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0006E12_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192056 ID=CN192056; Name=CN192056; organism=Citrus sinensis; type=EST; length=693bp
GAGGGGAGATTCTCGTACCCAAACACAAAACGAGTCATATTATTTAATTT
GCCTTAACCCATTTCTTTTGTCTTTACAAATTTGTTTGTCTTAAAAATCT
CAGCTTTCCTCTTTGTTTCGCTATAAAGATTACCCTCGTTTCTTTGCCAT
AAACATGGTGGCCGATTCCAAGGCTAAATCTGACATCTCTTTCGCCGGAA
CCTTCGCCAGTAGCGCTTTTGCCGCTTGCTTTGCCGAGATTTGTACTATT
CCTTTGGACACTGCTAAAGTTAGGCTTCAGCTGCAAAAGAAAGCTGTCGC
GGGGGATGGAGTGGCGTTGCCAAAGTACAAGGGTATGTTGGGTACAGTTG
CCACCATAGCTAGGGAAGAAGGTATGGTGTCTCTCTGGAAAGGCATTGTT
CCAGGATTACATCGTCAATGCTTATTTGGAGGGTTAAGGATTGGATTGTA
TGAGCCTGTGAAGACACTGTATGTGGGCAAGGACTTTGTTGGAGACGTTC
CTTTAAGCAAGAAAATACTTGCAGGACTTACAACTGGTGCTCTCGGGATC
ATGATCGCAAATCCAACTGATCTTGTGAAGGTCAGACTTCAAGCTGAAGG
AAAATTGCCTCCTGGTGTACCGAGGCGCTACAGTGGAGCGTTGAATGCTT
ATTTCACATTGTGAAACAGGAAGGATTTGCGGCTCTTTGGACT
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