CN192056

Overview
NameCN192056
Unique NameCN192056
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN192056 vs. ExPASy Swiss-Prot
Match: KMCP1_XENTR (Kidney mitochondrial carrier protein 1 OS=Xenopus tropicalis GN=slc25a30 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.024e-17
Identity = 49/127 (38.58%), Postives = 76/127 (59.84%), Query Frame = 2
Query:  236 EICTIPLDTAKVRLQLQKKAVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTLYVGKDFVGDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPG 616
            E  T P+D  K RLQ+Q +A       + +Y+GML  +  I +EEG+ +L+ GI P + RQ  +G ++IG Y+ +K L+V  D   D  L   +  G+ +G +   IANPTD++K+R+QA+G L  G
Sbjct:   20 ECGTFPIDLTKTRLQVQGQANDAKYKEI-RYRGMLHAIVRIWKEEGVKALYSGIAPAMLRQASYGTIKIGTYQSLKRLFV--DCPEDETLVINVFCGVLSGVVSSCIANPTDVLKIRMQAQGSLIQG 143          
BLAST of CN192056 vs. ExPASy Swiss-Prot
Match: KMCP1_HUMAN (Kidney mitochondrial carrier protein 1 OS=Homo sapiens GN=SLC25A30 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.312e-16
Identity = 44/127 (34.65%), Postives = 76/127 (59.84%), Query Frame = 2
Query:  236 EICTIPLDTAKVRLQLQKKAVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTLYVGKDFVGDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPG 616
            E  T P+D  K RLQ+Q +        + +Y+GML  +  I REEG+ +L+ GI P + RQ  +G ++IG Y+ +K L++ +     +P++  ++ G+ +G +   IANPTD++K+R+QA+     G
Sbjct:   20 ECGTFPIDLTKTRLQIQGQTNDAKFKEI-RYRGMLHALVRIGREEGLKALYSGIAPAMLRQASYGTIKIGTYQSLKRLFIERPEDETLPIN--VICGILSGVISSTIANPTDVLKIRMQAQSNTIQG 143          
BLAST of CN192056 vs. ExPASy Swiss-Prot
Match: KMCP1_XENLA (Kidney mitochondrial carrier protein 1 OS=Xenopus laevis GN=slc25a30 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.237e-16
Identity = 47/127 (37.01%), Postives = 74/127 (58.27%), Query Frame = 2
Query:  236 EICTIPLDTAKVRLQLQKKAVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTLYVGKDFVGDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPG 616
            E  T P+D  K RLQ+Q +        + +Y+GM+  +  I REEG+ +L+ GI P + RQ  +G ++IG Y+ +K L+V  D   D  L      G+ +G +   IANPTD++K+R+QA+G +  G
Sbjct:   20 ECGTFPIDLTKTRLQVQGQPNDAKYKEI-RYRGMMHAIVRIWREEGVKALYSGIAPAMLRQASYGTIKIGTYQSLKRLFV--DCPEDETLVLNAFCGVLSGVVSSCIANPTDVLKIRMQAQGNVMQG 143          
BLAST of CN192056 vs. ExPASy Swiss-Prot
Match: KMCP1_MACFA (Kidney mitochondrial carrier protein 1 OS=Macaca fascicularis GN=SLC25A30 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.237e-16
Identity = 46/127 (36.22%), Postives = 74/127 (58.27%), Query Frame = 2
Query:  236 EICTIPLDTAKVRLQLQKKAVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTLYVGKDFVGDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPG 616
            E  T P+D  K RLQ+Q +        + +Y+GML  +  I REEG+ +L+ GI P + RQ  +G ++IG Y+ +K L+V +    D  L   ++ G+ +G +   IANPTD++K+R+QA+     G
Sbjct:   20 ECGTFPIDLTKTRLQIQGQTNDAKFKEI-RYRGMLHALVRIGREEGLKALYSGIAPAMLRQSSYGTIKIGTYQSLKRLFVERP--EDETLLINVICGILSGVISSTIANPTDVLKIRMQAQSSTIQG 143          
BLAST of CN192056 vs. ExPASy Swiss-Prot
Match: KMCP1_MOUSE (Kidney mitochondrial carrier protein 1 OS=Mus musculus GN=Slc25a30 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.985e-16
Identity = 46/127 (36.22%), Postives = 74/127 (58.27%), Query Frame = 2
Query:  236 EICTIPLDTAKVRLQLQKKAVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTLYVGKDFVGDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPG 616
            E  T P+D  K RLQ+Q +    +   + +Y+GML  +  I REEG+ +L+ GI P + RQ  +G ++IG Y+ +K L V +    D  L   ++ G+ +G +   IANPTD++K+R+QA+     G
Sbjct:   20 ECGTFPIDLTKTRLQIQGQTNDANFREI-RYRGMLHALMRIGREEGLKALYSGIAPAMLRQASYGTIKIGTYQSLKRLAVERP--EDETLLVNVVCGILSGVISSAIANPTDVLKIRMQAQNSAVQG 143          
BLAST of CN192056 vs. ExPASy Swiss-Prot
Match: KMCP1_RAT (Kidney mitochondrial carrier protein 1 OS=Rattus norvegicus GN=Slc25a30 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.450e-15
Identity = 46/127 (36.22%), Postives = 73/127 (57.48%), Query Frame = 2
Query:  236 EICTIPLDTAKVRLQLQKKAVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTLYVGKDFVGDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPG 616
            E  T P+D  K RLQ+Q +        + +Y+GML  +  I REEG+ +L+ GI P + RQ  +G ++IG Y+ +K L V +    D  L   ++ G+ +G +   IANPTD++K+R+QA+     G
Sbjct:   20 ECGTFPIDLTKTRLQIQGQTNDAKFREI-RYRGMLHALMRIGREEGLRALYSGIAPAMLRQASYGTIKIGTYQSLKRLAVERP--EDETLLINVVCGILSGVISSAIANPTDVLKIRMQAQNSAVQG 143          

HSP 2 Score: 68.1662 bits (165), Expect = 1.621e-11
Identity = 40/132 (30.30%), Postives = 64/132 (48.48%), Query Frame = 2
Query:  251 PLDTAKVRLQLQKKAVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTLYVGKDFVGDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALN 646
            P D  K+R+Q Q  AV G         GM+G   +I ++EG   LWKG+     R  +  G+ + +Y+  K   +    +GD  +S   L+  T G +G + +NP D+V+ R+  +  L  G    Y G L+
Sbjct:  126 PTDVLKIRMQAQNSAVQG---------GMIGNFISIYQQEGTRGLWKGVSLTAQRAAIVVGVELPVYDITKKHLILSGLMGDT-VSTHFLSSFTCGLVGALASNPVDVVRTRMMNQRDLRDGRCSGYKGTLD 247          

HSP 3 Score: 21.1718 bits (43), Expect = 1.621e-11
Identity = 8/18 (44.44%), Postives = 12/18 (66.67%), Query Frame = 1
Query:  637 SVECLFHIVKQEGFAALW 690
            +++CL    K EGF AL+
Sbjct:  245 TLDCLLQTWKNEGFFALY 262          
BLAST of CN192056 vs. ExPASy Swiss-Prot
Match: DIC_MOUSE (Mitochondrial dicarboxylate carrier OS=Mus musculus GN=Slc25a10 PE=2 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.450e-15
Identity = 50/147 (34.01%), Postives = 73/147 (49.66%), Query Frame = 2
Query:  242 CTIPLDTAKVRLQLQKKAVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTLYVGKDFVGDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYFTL*NRKDLR 682
            CT PLD  KV LQ Q++              M G    + R +G ++L+ G+   L RQ  +   R  +YE ++  Y+ KD  G +P   K+L G  +G  G  +  P DLV VR+Q + KLPP   R YS AL+  + +   + LR
Sbjct:   22 CTHPLDLLKVHLQTQQEVKLR----------MTGMALQVVRTDGFLALYNGLSASLCRQMTYSLTRFAIYETMRD-YMTKDSQGPLPFYNKVLLGGISGLTGGFVGTPADLVNVRMQNDMKLPPSQRRNYSHALDGLYRVAREESLR 157          
BLAST of CN192056 vs. ExPASy Swiss-Prot
Match: DIC_HUMAN (Mitochondrial dicarboxylate carrier OS=Homo sapiens GN=SLC25A10 PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.228e-14
Identity = 49/147 (33.33%), Postives = 73/147 (49.66%), Query Frame = 2
Query:  242 CTIPLDTAKVRLQLQKKAVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTLYVGKDFVGDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYFTL*NRKDLR 682
            CT PLD  KV LQ Q++              M G    + R +G+++L+ G+   L RQ  +   R  +YE V+   V K   G +P  +K+L G  +G  G  +  P DLV VR+Q + KLP G  R Y+ AL+  + +   + LR
Sbjct:   23 CTHPLDLLKVHLQTQQEVKLR----------MTGMALRVVRTDGILALYSGLSASLCRQMTYSLTRFAIYETVRDR-VAKGSQGPLPFHEKVLLGSVSGLAGGFVGTPADLVNVRMQNDVKLPQGQRRNYAHALDGLYRVAREEGLR 158          
BLAST of CN192056 vs. ExPASy Swiss-Prot
Match: UCPB_DICDI (Mitochondrial substrate carrier family protein ucpB OS=Dictyostelium discoideum GN=ucpB PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.773e-13
Identity = 42/118 (35.59%), Postives = 67/118 (56.78%), Query Frame = 2
Query:  251 PLDTAKVRLQLQKKAVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTLYVGKDFVGDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGK 604
            P+D  K R Q+      G+G+   K  G++     I + EG+ +++KG+ P L R+  +  LR+G Y+ +K  ++  D  G   L  K+ +G  +GALG  I +PTDL+KVR+QA  K
Sbjct:   27 PVDVLKTRFQIH-----GEGID-SKSLGLVNGTIKIIKNEGISAMYKGLTPSLLREATYSTLRMGGYDVIKNYFI--DSNGKTNLLSKVTSGALSGALGACITSPTDLIKVRMQASSK 136          
BLAST of CN192056 vs. ExPASy Swiss-Prot
Match: M2OM_BOVIN (Mitochondrial 2-oxoglutarate/malate carrier protein OS=Bos taurus GN=SLC25A11 PE=1 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 3.211e-13
Identity = 43/137 (31.39%), Postives = 68/137 (49.64%), Query Frame = 2
Query:  251 PLDTAKVRLQLQKKAVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTLYVGKDFVGDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYFTL 661
            PLD  K R+QL     +G+G    +YK     + +I R EG+  ++ G+  GL RQ  +   R+G+Y  +     G D      L K ++ G+T GA G  +  P ++  +R+ A+G+LP    R Y    NA F +
Sbjct:   41 PLDLVKNRMQL-----SGEGAKTREYKTSFHALISILRAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFLLKAVI-GMTAGATGAFVGTPAEVALIRMTADGRLPVDQRRGYKNVFNALFRI 171          

HSP 2 Score: 21.9422 bits (45), Expect = 3.211e-13
Identity = 8/14 (57.14%), Postives = 10/14 (71.43%), Query Frame = 1
Query:  649 LFHIVKQEGFAALW 690
            LF IV++EG   LW
Sbjct:  168 LFRIVQEEGVPTLW 181          
The following BLAST results are available for this feature:
BLAST of CN192056 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
KMCP1_XENTR2.024e-1738.58Kidney mitochondrial carrier protein 1 OS=Xenopus ... [more]
KMCP1_HUMAN1.312e-1634.65Kidney mitochondrial carrier protein 1 OS=Homo sap... [more]
KMCP1_XENLA2.237e-1637.01Kidney mitochondrial carrier protein 1 OS=Xenopus ... [more]
KMCP1_MACFA2.237e-1636.22Kidney mitochondrial carrier protein 1 OS=Macaca f... [more]
KMCP1_MOUSE4.985e-1636.22Kidney mitochondrial carrier protein 1 OS=Mus musc... [more]
KMCP1_RAT1.450e-1536.22Kidney mitochondrial carrier protein 1 OS=Rattus n... [more]
DIC_MOUSE1.450e-1534.01Mitochondrial dicarboxylate carrier OS=Mus musculu... [more]
DIC_HUMAN1.228e-1433.33Mitochondrial dicarboxylate carrier OS=Homo sapien... [more]
UCPB_DICDI1.773e-1335.59Mitochondrial substrate carrier family protein ucp... [more]
M2OM_BOVIN3.211e-1331.39Mitochondrial 2-oxoglutarate/malate carrier protei... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0006E12_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192056 ID=CN192056; Name=CN192056; organism=Citrus sinensis; type=EST; length=693bp
GAGGGGAGATTCTCGTACCCAAACACAAAACGAGTCATATTATTTAATTT
GCCTTAACCCATTTCTTTTGTCTTTACAAATTTGTTTGTCTTAAAAATCT
CAGCTTTCCTCTTTGTTTCGCTATAAAGATTACCCTCGTTTCTTTGCCAT
AAACATGGTGGCCGATTCCAAGGCTAAATCTGACATCTCTTTCGCCGGAA
CCTTCGCCAGTAGCGCTTTTGCCGCTTGCTTTGCCGAGATTTGTACTATT
CCTTTGGACACTGCTAAAGTTAGGCTTCAGCTGCAAAAGAAAGCTGTCGC
GGGGGATGGAGTGGCGTTGCCAAAGTACAAGGGTATGTTGGGTACAGTTG
CCACCATAGCTAGGGAAGAAGGTATGGTGTCTCTCTGGAAAGGCATTGTT
CCAGGATTACATCGTCAATGCTTATTTGGAGGGTTAAGGATTGGATTGTA
TGAGCCTGTGAAGACACTGTATGTGGGCAAGGACTTTGTTGGAGACGTTC
CTTTAAGCAAGAAAATACTTGCAGGACTTACAACTGGTGCTCTCGGGATC
ATGATCGCAAATCCAACTGATCTTGTGAAGGTCAGACTTCAAGCTGAAGG
AAAATTGCCTCCTGGTGTACCGAGGCGCTACAGTGGAGCGTTGAATGCTT
ATTTCACATTGTGAAACAGGAAGGATTTGCGGCTCTTTGGACT
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