CN192054

Overview
NameCN192054
Unique NameCN192054
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length312
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_ECOL6 (Adenine phosphoribosyltransferase OS=Escherichia coli O6 GN=apt PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.901e-23
Identity = 50/87 (57.47%), Postives = 67/87 (77.01%), Query Frame = 1 
Query:   52 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 312
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +IDL VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP KLP E IS
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETIS 97
[Close]
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_ECOL5 (Adenine phosphoribosyltransferase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=apt PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.901e-23
Identity = 50/87 (57.47%), Postives = 67/87 (77.01%), Query Frame = 1 
Query:   52 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 312
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +IDL VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP KLP E IS
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETIS 97
[Close]
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_ECOK1 (Adenine phosphoribosyltransferase OS=Escherichia coli O1:K1 / APEC GN=apt PE=3 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 2.901e-23
Identity = 50/87 (57.47%), Postives = 67/87 (77.01%), Query Frame = 1 
Query:   52 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 312
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +IDL VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP KLP E IS
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETIS 97
[Close]
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_ECOHS (Adenine phosphoribosyltransferase OS=Escherichia coli O9:H4 (strain HS) GN=apt PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.901e-23
Identity = 50/87 (57.47%), Postives = 67/87 (77.01%), Query Frame = 1 
Query:   52 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 312
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +IDL VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP KLP E IS
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETIS 97
[Close]
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_ECODH (Adenine phosphoribosyltransferase OS=Escherichia coli (strain K12 / DH10B) GN=apt PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.901e-23
Identity = 50/87 (57.47%), Postives = 67/87 (77.01%), Query Frame = 1 
Query:   52 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 312
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +IDL VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP KLP E IS
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETIS 97
[Close]
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_ECOBW (Adenine phosphoribosyltransferase OS=Escherichia coli (strain K12 / BW2952) GN=apt PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.901e-23
Identity = 50/87 (57.47%), Postives = 67/87 (77.01%), Query Frame = 1 
Query:   52 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 312
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +IDL VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP KLP E IS
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETIS 97
[Close]
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_ECO8A (Adenine phosphoribosyltransferase OS=Escherichia coli O8 (strain IAI1) GN=apt PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.901e-23
Identity = 50/87 (57.47%), Postives = 67/87 (77.01%), Query Frame = 1 
Query:   52 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 312
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +IDL VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP KLP E IS
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETIS 97
[Close]
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_ECO81 (Adenine phosphoribosyltransferase OS=Escherichia coli O81 (strain ED1a) GN=apt PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.901e-23
Identity = 50/87 (57.47%), Postives = 67/87 (77.01%), Query Frame = 1 
Query:   52 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 312
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +IDL VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP KLP E IS
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETIS 97
[Close]
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_ECO7I (Adenine phosphoribosyltransferase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=apt PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.901e-23
Identity = 50/87 (57.47%), Postives = 67/87 (77.01%), Query Frame = 1 
Query:   52 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 312
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +IDL VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP KLP E IS
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETIS 97
[Close]
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_ECO5E (Adenine phosphoribosyltransferase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=apt PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.901e-23
Identity = 50/87 (57.47%), Postives = 67/87 (77.01%), Query Frame = 1 
Query:   52 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 312
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +IDL VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP KLP E IS
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGINKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETIS 97
The following BLAST results are available for this feature:
BLAST of CN192054 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_ECOL62.901e-2357.47Adenine phosphoribosyltransferase OS=Escherichia c... [more]
APT_ECOL52.901e-2357.47Adenine phosphoribosyltransferase OS=Escherichia c... [more]
APT_ECOK12.901e-2357.47Adenine phosphoribosyltransferase OS=Escherichia c... [more]
APT_ECOHS2.901e-2357.47Adenine phosphoribosyltransferase OS=Escherichia c... [more]
APT_ECODH2.901e-2357.47Adenine phosphoribosyltransferase OS=Escherichia c... [more]
APT_ECOBW2.901e-2357.47Adenine phosphoribosyltransferase OS=Escherichia c... [more]
APT_ECO8A2.901e-2357.47Adenine phosphoribosyltransferase OS=Escherichia c... [more]
APT_ECO812.901e-2357.47Adenine phosphoribosyltransferase OS=Escherichia c... [more]
APT_ECO7I2.901e-2357.47Adenine phosphoribosyltransferase OS=Escherichia c... [more]
APT_ECO5E2.901e-2357.47Adenine phosphoribosyltransferase OS=Escherichia c... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0006E10_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192054 ID=CN192054; Name=CN192054; organism=Citrus sinensis; type=EST; length=312bp
GAGGAAATGGCTTCAGCTGACGTAAAAGCACAAGACCCTCGAATCGCTGG
TATTTCCTCAGCAATTCGTGTCATCCCAGACTTCCCTAAACCAGGGATTA
TGTTTCAAGATATCACAACATTGCTTCTTGATACCAAGGCTTTTAGAGAT
ACTATTGATCTGTTCGTTGAGAGGTACAAGGACAAAAACATCTCTGTTGT
TGCAGGTATTGAAGCTAGGGGTTTTATATTTGGGCCTCCTATTGCATTGG
CTATTGGGGCAAAGTTTGTTCCTATGAGGAAACCTAAGAAGCTTCCTGGG
GAGGTCATTTCC
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