CN192054

Overview
NameCN192054
Unique NameCN192054
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length312
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_STRA5 (Adenine phosphoribosyltransferase OS=Streptococcus agalactiae serotype V GN=apt PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.798e-15
Identity = 40/87 (45.98%), Postives = 58/87 (66.67%), Query Frame = 1
Query:   52 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 312
            +++ I  I ++P+ GI F+DI+ L+ D KA+   +   V+   DK+I ++ G EARGFI G P+A A+G  F P+RKP KLP EVIS
Sbjct:    3 LNNYIASIENYPQEGITFRDISPLMADGKAYSYAVREIVQYAADKDIDMIVGPEARGFIVGCPVAYALGIGFAPVRKPGKLPREVIS 89          
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_STRA3 (Adenine phosphoribosyltransferase OS=Streptococcus agalactiae serotype III GN=apt PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.798e-15
Identity = 40/87 (45.98%), Postives = 58/87 (66.67%), Query Frame = 1
Query:   52 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 312
            +++ I  I ++P+ GI F+DI+ L+ D KA+   +   V+   DK+I ++ G EARGFI G P+A A+G  F P+RKP KLP EVIS
Sbjct:    3 LNNYIASIENYPQEGITFRDISPLMADGKAYSYAVREIVQYAADKDIDMIVGPEARGFIVGCPVAYALGIGFAPVRKPGKLPREVIS 89          
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_STRA1 (Adenine phosphoribosyltransferase OS=Streptococcus agalactiae serotype Ia GN=apt PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.798e-15
Identity = 40/87 (45.98%), Postives = 58/87 (66.67%), Query Frame = 1
Query:   52 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 312
            +++ I  I ++P+ GI F+DI+ L+ D KA+   +   V+   DK+I ++ G EARGFI G P+A A+G  F P+RKP KLP EVIS
Sbjct:    3 LNNYIASIENYPQEGITFRDISPLMADGKAYSYAVREIVQYAADKDIDMIVGPEARGFIVGCPVAYALGIGFAPVRKPGKLPREVIS 89          
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_STAHJ (Adenine phosphoribosyltransferase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=apt PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.798e-15
Identity = 38/79 (48.10%), Postives = 55/79 (69.62%), Query Frame = 1
Query:   73 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVI 309
            + D+PKPG+ F+DITT++ + +A+    D  V+  KD+++ VV G EARGFI G P+A ++G  F P+RK  KLP EVI
Sbjct:   10 VQDWPKPGVSFKDITTIMDNGEAYGYATDQIVKYAKDRDVDVVVGPEARGFIIGCPVAYSMGIGFAPVRKEGKLPREVI 88          
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_PELUB (Adenine phosphoribosyltransferase OS=Pelagibacter ubique GN=apt PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.798e-15
Identity = 38/83 (45.78%), Postives = 53/83 (63.86%), Query Frame = 1
Query:   64 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 312
            IR IPD+PK GI+F+DITTL+ D  AF + I+  +ER K+  I  +A IE+RGF+F   ++  +   F+  RK  KLP E  S
Sbjct:    7 IRSIPDYPKKGILFRDITTLIKDADAFEECINQIIERSKNYKIDKIAAIESRGFVFASAVSYLLKKPFIMFRKKNKLPAETHS 89          
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_LACLS (Adenine phosphoribosyltransferase OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=apt PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.798e-15
Identity = 39/82 (47.56%), Postives = 53/82 (64.63%), Query Frame = 1
Query:   64 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVI 309
            I  I ++PK G++F+DI+ L+ D  A+       V+  +DK I +V G EARGFI G P+A A+G  F P+RKP KLP EVI
Sbjct:    7 IATIENYPKEGVVFRDISPLMADGNAYNYAATEIVQYARDKEIDMVVGPEARGFIIGCPVAFALGVGFAPVRKPGKLPREVI 88          
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_LACLM (Adenine phosphoribosyltransferase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=apt PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.798e-15
Identity = 39/82 (47.56%), Postives = 53/82 (64.63%), Query Frame = 1
Query:   64 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVI 309
            I  I ++PK G++F+DI+ L+ D  A+       V+  +DK I +V G EARGFI G P+A A+G  F P+RKP KLP EVI
Sbjct:    7 IATIENYPKEGVVFRDISPLMADGNAYNYAATEIVQYARDKEIDMVVGPEARGFIIGCPVAFALGVGFAPVRKPGKLPREVI 88          
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_LACLA (Adenine phosphoribosyltransferase OS=Lactococcus lactis subsp. lactis GN=apt PE=3 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 3.798e-15
Identity = 39/82 (47.56%), Postives = 53/82 (64.63%), Query Frame = 1
Query:   64 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVI 309
            I  I ++PK G++F+DI+ L+ D  A+       V+  +DK I +V G EARGFI G P+A A+G  F P+RKP KLP EVI
Sbjct:    7 IATIENYPKEGVVFRDISPLMADGNAYNYAATEIVQYARDKEIDMVVGPEARGFIIGCPVAFALGVGFAPVRKPGKLPREVI 88          
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_GERCA (Adenine phosphoribosyltransferase OS=Gerbillus campestris GN=APRT PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.798e-15
Identity = 40/96 (41.67%), Postives = 60/96 (62.50%), Query Frame = 1
Query:   34 DPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKN---ISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 312
            +P +  ++  IR  PDFP PG++F+DI+ LL D  +FR +I L     K K+   I  +AG+++RGF+FGP +A  +G   V +RK  KLPG  +S
Sbjct:    3 EPELQLVARRIRSFPDFPIPGVLFRDISPLLKDPDSFRASIRLLANHLKSKHGGKIDYIAGLDSRGFLFGPSLAQELGLGCVLIRKRGKLPGPTVS 98          
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_ERYLH (Adenine phosphoribosyltransferase OS=Erythrobacter litoralis (strain HTCC2594) GN=apt PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.798e-15
Identity = 39/86 (45.35%), Postives = 53/86 (61.63%), Query Frame = 1
Query:   52 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVI 309
            + + IR +PDFP PGI F+DITTLL   +    T+    E  +      +AG+EARGFIFG  +A+ +G  F+P+RKP KLP   I
Sbjct:    6 LKALIRTVPDFPAPGIQFRDITTLLAHGEGLAATMRHLGEAARLAGAEAIAGMEARGFIFGAGVAVELGLGFLPIRKPGKLPASTI 91          
The following BLAST results are available for this feature:
BLAST of CN192054 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_STRA53.798e-1545.98Adenine phosphoribosyltransferase OS=Streptococcus... [more]
APT_STRA33.798e-1545.98Adenine phosphoribosyltransferase OS=Streptococcus... [more]
APT_STRA13.798e-1545.98Adenine phosphoribosyltransferase OS=Streptococcus... [more]
APT_STAHJ3.798e-1548.10Adenine phosphoribosyltransferase OS=Staphylococcu... [more]
APT_PELUB3.798e-1545.78Adenine phosphoribosyltransferase OS=Pelagibacter ... [more]
APT_LACLS3.798e-1547.56Adenine phosphoribosyltransferase OS=Lactococcus l... [more]
APT_LACLM3.798e-1547.56Adenine phosphoribosyltransferase OS=Lactococcus l... [more]
APT_LACLA3.798e-1547.56Adenine phosphoribosyltransferase OS=Lactococcus l... [more]
APT_GERCA3.798e-1541.67Adenine phosphoribosyltransferase OS=Gerbillus cam... [more]
APT_ERYLH3.798e-1545.35Adenine phosphoribosyltransferase OS=Erythrobacter... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0006E10_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192054 ID=CN192054; Name=CN192054; organism=Citrus sinensis; type=EST; length=312bp
GAGGAAATGGCTTCAGCTGACGTAAAAGCACAAGACCCTCGAATCGCTGG
TATTTCCTCAGCAATTCGTGTCATCCCAGACTTCCCTAAACCAGGGATTA
TGTTTCAAGATATCACAACATTGCTTCTTGATACCAAGGCTTTTAGAGAT
ACTATTGATCTGTTCGTTGAGAGGTACAAGGACAAAAACATCTCTGTTGT
TGCAGGTATTGAAGCTAGGGGTTTTATATTTGGGCCTCCTATTGCATTGG
CTATTGGGGCAAAGTTTGTTCCTATGAGGAAACCTAAGAAGCTTCCTGGG
GAGGTCATTTCC
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