CN192054

Overview
NameCN192054
Unique NameCN192054
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length312
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_XANAC (Adenine phosphoribosyltransferase OS=Xanthomonas axonopodis pv. citri GN=apt PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.960e-15
Identity = 40/82 (48.78%), Postives = 51/82 (62.20%), Query Frame = 1
Query:   64 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVI 309
            IR I DFPKPGI+F+DIT LL D   F   +D   + ++   +  V GIEARGFI G  +A  +   FVP+RKP KLPG  +
Sbjct:   22 IRDIVDFPKPGIVFKDITPLLSDGPDFASALDEMAQPWRTTPLDAVLGIEARGFILGAALARELRTGFVPVRKPGKLPGRTL 103          
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_STRPZ (Adenine phosphoribosyltransferase OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=apt PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.960e-15
Identity = 40/87 (45.98%), Postives = 57/87 (65.52%), Query Frame = 1
Query:   52 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 312
            +++ I  I D+PK GI F+DI+ L+ D KA+   I    +   DK+I +V G EARGFI G P+A+ +G  F P+RKP KLP +V+S
Sbjct:    3 LTNYIASIKDYPKAGITFRDISPLMADGKAYSYAIREIAQYACDKDIDMVVGPEARGFIIGCPVAVELGIGFAPVRKPGKLPRDVVS 89          
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_STRPM (Adenine phosphoribosyltransferase OS=Streptococcus pyogenes serotype M28 GN=apt PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.960e-15
Identity = 40/87 (45.98%), Postives = 57/87 (65.52%), Query Frame = 1
Query:   52 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 312
            +++ I  I D+PK GI F+DI+ L+ D KA+   I    +   DK+I +V G EARGFI G P+A+ +G  F P+RKP KLP +V+S
Sbjct:    3 LTNYIASIKDYPKAGITFRDISPLMADGKAYSYAIREIAQYACDKDIDMVVGPEARGFIIGCPVAVELGIGFAPVRKPGKLPRDVVS 89          
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_STRPG (Adenine phosphoribosyltransferase OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=apt PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.960e-15
Identity = 40/87 (45.98%), Postives = 57/87 (65.52%), Query Frame = 1
Query:   52 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 312
            +++ I  I D+PK GI F+DI+ L+ D KA+   I    +   DK+I +V G EARGFI G P+A+ +G  F P+RKP KLP +V+S
Sbjct:    3 LTNYIASIKDYPKAGITFRDISPLMADGKAYSYAIREIAQYACDKDIDMVVGPEARGFIIGCPVAVELGIGFAPVRKPGKLPRDVVS 89          
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_STRPF (Adenine phosphoribosyltransferase OS=Streptococcus pyogenes serotype M4 (strain MGAS10750) GN=apt PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.960e-15
Identity = 40/87 (45.98%), Postives = 57/87 (65.52%), Query Frame = 1
Query:   52 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 312
            +++ I  I D+PK GI F+DI+ L+ D KA+   I    +   DK+I +V G EARGFI G P+A+ +G  F P+RKP KLP +V+S
Sbjct:    3 LTNYIASIKDYPKAGITFRDISPLMADGKAYSYAIREIAQYACDKDIDMVVGPEARGFIIGCPVAVELGIGFAPVRKPGKLPRDVVS 89          
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_STRPD (Adenine phosphoribosyltransferase OS=Streptococcus pyogenes serotype M2 (strain MGAS10270) GN=apt PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.960e-15
Identity = 40/87 (45.98%), Postives = 57/87 (65.52%), Query Frame = 1
Query:   52 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 312
            +++ I  I D+PK GI F+DI+ L+ D KA+   I    +   DK+I +V G EARGFI G P+A+ +G  F P+RKP KLP +V+S
Sbjct:    3 LTNYIASIKDYPKAGITFRDISPLMADGKAYSYAIREIAQYACDKDIDMVVGPEARGFIIGCPVAVELGIGFAPVRKPGKLPRDVVS 89          
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_STRPC (Adenine phosphoribosyltransferase OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=apt PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.960e-15
Identity = 40/87 (45.98%), Postives = 57/87 (65.52%), Query Frame = 1
Query:   52 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 312
            +++ I  I D+PK GI F+DI+ L+ D KA+   I    +   DK+I +V G EARGFI G P+A+ +G  F P+RKP KLP +V+S
Sbjct:    3 LTNYIASIKDYPKAGITFRDISPLMADGKAYSYAIREIAQYACDKDIDMVVGPEARGFIIGCPVAVELGIGFAPVRKPGKLPRDVVS 89          
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_STRPB (Adenine phosphoribosyltransferase OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=apt PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.960e-15
Identity = 40/87 (45.98%), Postives = 57/87 (65.52%), Query Frame = 1
Query:   52 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 312
            +++ I  I D+PK GI F+DI+ L+ D KA+   I    +   DK+I +V G EARGFI G P+A+ +G  F P+RKP KLP +V+S
Sbjct:    3 LTNYIASIKDYPKAGITFRDISPLMADGKAYSYAIREIAQYACDKDIDMVVGPEARGFIIGCPVAVELGIGFAPVRKPGKLPRDVVS 89          
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_STRP8 (Adenine phosphoribosyltransferase OS=Streptococcus pyogenes serotype M18 GN=apt PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.960e-15
Identity = 40/87 (45.98%), Postives = 57/87 (65.52%), Query Frame = 1
Query:   52 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 312
            +++ I  I D+PK GI F+DI+ L+ D KA+   I    +   DK+I +V G EARGFI G P+A+ +G  F P+RKP KLP +V+S
Sbjct:    3 LTNYIASIKDYPKAGITFRDISPLMADGKAYSYAIREIAQYACDKDIDMVVGPEARGFIIGCPVAVELGIGFAPVRKPGKLPRDVVS 89          
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_STRP6 (Adenine phosphoribosyltransferase OS=Streptococcus pyogenes serotype M6 GN=apt PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.960e-15
Identity = 40/87 (45.98%), Postives = 57/87 (65.52%), Query Frame = 1
Query:   52 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 312
            +++ I  I D+PK GI F+DI+ L+ D KA+   I    +   DK+I +V G EARGFI G P+A+ +G  F P+RKP KLP +V+S
Sbjct:    3 LTNYIASIKDYPKAGITFRDISPLMADGKAYSYAIREIAQYACDKDIDMVVGPEARGFIIGCPVAVELGIGFAPVRKPGKLPRDVVS 89          
The following BLAST results are available for this feature:
BLAST of CN192054 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_XANAC4.960e-1548.78Adenine phosphoribosyltransferase OS=Xanthomonas a... [more]
APT_STRPZ4.960e-1545.98Adenine phosphoribosyltransferase OS=Streptococcus... [more]
APT_STRPM4.960e-1545.98Adenine phosphoribosyltransferase OS=Streptococcus... [more]
APT_STRPG4.960e-1545.98Adenine phosphoribosyltransferase OS=Streptococcus... [more]
APT_STRPF4.960e-1545.98Adenine phosphoribosyltransferase OS=Streptococcus... [more]
APT_STRPD4.960e-1545.98Adenine phosphoribosyltransferase OS=Streptococcus... [more]
APT_STRPC4.960e-1545.98Adenine phosphoribosyltransferase OS=Streptococcus... [more]
APT_STRPB4.960e-1545.98Adenine phosphoribosyltransferase OS=Streptococcus... [more]
APT_STRP84.960e-1545.98Adenine phosphoribosyltransferase OS=Streptococcus... [more]
APT_STRP64.960e-1545.98Adenine phosphoribosyltransferase OS=Streptococcus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0006E10_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192054 ID=CN192054; Name=CN192054; organism=Citrus sinensis; type=EST; length=312bp
GAGGAAATGGCTTCAGCTGACGTAAAAGCACAAGACCCTCGAATCGCTGG
TATTTCCTCAGCAATTCGTGTCATCCCAGACTTCCCTAAACCAGGGATTA
TGTTTCAAGATATCACAACATTGCTTCTTGATACCAAGGCTTTTAGAGAT
ACTATTGATCTGTTCGTTGAGAGGTACAAGGACAAAAACATCTCTGTTGT
TGCAGGTATTGAAGCTAGGGGTTTTATATTTGGGCCTCCTATTGCATTGG
CTATTGGGGCAAAGTTTGTTCCTATGAGGAAACCTAAGAAGCTTCCTGGG
GAGGTCATTTCC
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