CN192054

Overview
NameCN192054
Unique NameCN192054
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length312
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_MYCPE (Adenine phosphoribosyltransferase OS=Mycoplasma penetrans GN=apt PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.443e-14
Identity = 42/87 (48.28%), Postives = 53/87 (60.92%), Query Frame = 1
Query:   52 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 312
            I + I  I DFPK GI F+DIT LLLD K     ID   +  K  +  ++   E+RGF+FG P+AL +   FVP+RK  KLP EVIS
Sbjct:    6 IKNTIATIEDFPKKGISFKDITPLLLDHKKMNFIIDELAKFAKTIDFDIIVAPESRGFLFGLPLALNLKKPFVPIRKKGKLPREVIS 92          
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_MYCGA (Adenine phosphoribosyltransferase OS=Mycoplasma gallisepticum GN=apt PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.443e-14
Identity = 40/90 (44.44%), Postives = 52/90 (57.78%), Query Frame = 1
Query:   43 IAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 312
            IA +   I  + DFPKPGI+F DIT +LLD K F   I +  E  K  N  ++A  E+RGF+FG P+A  +   FV +RK  KLP    S
Sbjct:    6 IAQLKKTIITVKDFPKPGILFYDITPILLDPKLFDQVISVMAEVAKKSNADMIASPESRGFLFGVPLANKLKLPFVLVRKQNKLPRATFS 95          
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_LACSS (Adenine phosphoribosyltransferase OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=apt PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.443e-14
Identity = 36/80 (45.00%), Postives = 51/80 (63.75%), Query Frame = 1
Query:   73 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 312
            +PDFP+ G+ F+DI+ L+ D +A+    D  VE  K+K + ++ G EARGFI G P+A  +G  F P RK  KLP E +S
Sbjct:   12 VPDFPEAGVTFRDISPLMSDGEAYAAATDKIVEYAKNKGVEMIVGPEARGFIVGCPVAYKLGVGFAPARKKGKLPRETVS 91          
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_STRU0 (Adenine phosphoribosyltransferase OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=apt PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.885e-14
Identity = 39/83 (46.99%), Postives = 53/83 (63.86%), Query Frame = 1
Query:   64 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 312
            I  I ++PK GI F+DI+ L+ D KA+   I    +   DK I ++ G EARGFI G P+A+ +G  F P+RKP KLP EV+S
Sbjct:    7 IASIENYPKEGITFRDISPLMADGKAYSYAIREICQYAADKEIDMIVGPEARGFIIGCPVAVELGIGFAPVRKPGKLPREVVS 89          
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_STRS7 (Adenine phosphoribosyltransferase OS=Streptococcus equi subsp. zooepidemicus (strain H70) GN=apt PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.885e-14
Identity = 40/87 (45.98%), Postives = 56/87 (64.37%), Query Frame = 1
Query:   52 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 312
            ++  I  I ++PK GI F+DI+ L+   KA+   I   V+   DK+I ++ G EARGFI G P+A+ +G  F P+RKP KLP EVIS
Sbjct:    3 LTQYIASIENYPKEGITFRDISPLMASGKAYSYAIREIVQYACDKDIDMIVGPEARGFIIGCPVAVELGIGFAPVRKPGKLPREVIS 89          
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_STRGC (Adenine phosphoribosyltransferase OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=apt PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.885e-14
Identity = 39/83 (46.99%), Postives = 52/83 (62.65%), Query Frame = 1
Query:   64 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 312
            I  I ++PK G+ F+DI+ L+ D  A+   +   V+   DK I +V G EARGFI G P+A  +G  F P+RKP KLP EVIS
Sbjct:    7 IATIENYPKEGVTFRDISPLMADGNAYSYAVREIVQYATDKKIDMVVGPEARGFIVGCPVAFELGIGFAPVRKPGKLPREVIS 89          
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_STREM (Adenine phosphoribosyltransferase OS=Streptococcus equi subsp. zooepidemicus (strain MGCS10565) GN=apt PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.885e-14
Identity = 40/87 (45.98%), Postives = 56/87 (64.37%), Query Frame = 1
Query:   52 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 312
            ++  I  I ++PK GI F+DI+ L+   KA+   I   V+   DK+I ++ G EARGFI G P+A+ +G  F P+RKP KLP EVIS
Sbjct:    3 LTQYIASIENYPKEGITFRDISPLMASGKAYSYAIREIVQYACDKDIDMIVGPEARGFIIGCPVAVELGIGFAPVRKPGKLPREVIS 89          
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_STRE4 (Adenine phosphoribosyltransferase OS=Streptococcus equi subsp. equi (strain 4047) GN=apt PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.885e-14
Identity = 40/87 (45.98%), Postives = 56/87 (64.37%), Query Frame = 1
Query:   52 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 312
            ++  I  I ++PK GI F+DI+ L+   KA+   I   V+   DK+I ++ G EARGFI G P+A+ +G  F P+RKP KLP EVIS
Sbjct:    3 LTQYIASIENYPKEGITFRDISPLMASGKAYSYAIREIVQYACDKDIDMIVGPEARGFIIGCPVAVELGIGFAPVRKPGKLPREVIS 89          
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_PSEMY (Adenine phosphoribosyltransferase OS=Pseudomonas mendocina (strain ymp) GN=apt PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.885e-14
Identity = 36/87 (41.38%), Postives = 53/87 (60.92%), Query Frame = 1
Query:   52 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 312
            I + IR +PDFPKPG++F+DIT L    +A R   D F++RY +   S +  ++ARGF+ G  IA  +    +  RK  KLP +V+S
Sbjct:    8 IKTLIRPVPDFPKPGVVFRDITPLFQSPRALRMVADSFIQRYVEAEFSHIGAMDARGFLIGSIIAYELNKPLILFRKQGKLPADVLS 94          
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_GRAFK (Adenine phosphoribosyltransferase OS=Gramella forsetii (strain KT0803) GN=apt PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.885e-14
Identity = 38/82 (46.34%), Postives = 52/82 (63.41%), Query Frame = 1
Query:   52 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLP 297
            + S +R I DFPK G+ ++DIT LLLD +A R  + LF++      I  V GIE+RGF F   +A  + A F+P+RKP KLP
Sbjct:    3 LKSYVREIADFPKKGVSYKDITPLLLDPEAMRLAVKLFMKNLPHGKIDKVVGIESRGFFFATMLAEKLNAGFIPVRKPGKLP 84          
The following BLAST results are available for this feature:
BLAST of CN192054 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_MYCPE1.443e-1448.28Adenine phosphoribosyltransferase OS=Mycoplasma pe... [more]
APT_MYCGA1.443e-1444.44Adenine phosphoribosyltransferase OS=Mycoplasma ga... [more]
APT_LACSS1.443e-1445.00Adenine phosphoribosyltransferase OS=Lactobacillus... [more]
APT_STRU01.885e-1446.99Adenine phosphoribosyltransferase OS=Streptococcus... [more]
APT_STRS71.885e-1445.98Adenine phosphoribosyltransferase OS=Streptococcus... [more]
APT_STRGC1.885e-1446.99Adenine phosphoribosyltransferase OS=Streptococcus... [more]
APT_STREM1.885e-1445.98Adenine phosphoribosyltransferase OS=Streptococcus... [more]
APT_STRE41.885e-1445.98Adenine phosphoribosyltransferase OS=Streptococcus... [more]
APT_PSEMY1.885e-1441.38Adenine phosphoribosyltransferase OS=Pseudomonas m... [more]
APT_GRAFK1.885e-1446.34Adenine phosphoribosyltransferase OS=Gramella fors... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0006E10_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192054 ID=CN192054; Name=CN192054; organism=Citrus sinensis; type=EST; length=312bp
GAGGAAATGGCTTCAGCTGACGTAAAAGCACAAGACCCTCGAATCGCTGG
TATTTCCTCAGCAATTCGTGTCATCCCAGACTTCCCTAAACCAGGGATTA
TGTTTCAAGATATCACAACATTGCTTCTTGATACCAAGGCTTTTAGAGAT
ACTATTGATCTGTTCGTTGAGAGGTACAAGGACAAAAACATCTCTGTTGT
TGCAGGTATTGAAGCTAGGGGTTTTATATTTGGGCCTCCTATTGCATTGG
CTATTGGGGCAAAGTTTGTTCCTATGAGGAAACCTAAGAAGCTTCCTGGG
GAGGTCATTTCC
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