CN192054

Overview
NameCN192054
Unique NameCN192054
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length312
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_SALTO (Adenine phosphoribosyltransferase OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=apt PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.462e-14
Identity = 38/82 (46.34%), Postives = 50/82 (60.98%), Query Frame = 1
Query:   52 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLP 297
            ++S +  +PDFPKPG+MF+D+  L  D  AFR+ ID  V  +   +   V GIEARGF+    IA A G   VP+RK  KLP
Sbjct:   21 VASRVLDVPDFPKPGVMFKDLMPLFSDGDAFREVIDDIVRYHGRDSFDTVVGIEARGFVVAAAIAYAAGVGVVPVRKAGKLP 102          
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_MASHI (Adenine phosphoribosyltransferase OS=Mastomys hildebrantii GN=APRT PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.462e-14
Identity = 39/96 (40.62%), Postives = 59/96 (61.46%), Query Frame = 1
Query:   34 DPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKN---ISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 312
            +P +  ++  IR  PDFP PG++F+DI+ LL D  +FR +I L     K  +   I  +AG+++RGF+FGP +A  +G   V +RK  KLPG  +S
Sbjct:    3 EPELQLVARRIRSFPDFPIPGVLFRDISPLLKDPDSFRASIRLLASHLKSLHGGKIDYIAGLDSRGFLFGPSLAQELGVGCVLIRKRGKLPGPTLS 98          
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_JANSC (Adenine phosphoribosyltransferase OS=Jannaschia sp. (strain CCS1) GN=apt PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.462e-14
Identity = 38/82 (46.34%), Postives = 50/82 (60.98%), Query Frame = 1
Query:   64 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVI 309
            IR IPDFP  GI+F+D+TTL  D + FR  +D  +  +  + I  VAG+EARGFI G  +A  +   FV +RK  KLP   I
Sbjct:   11 IRTIPDFPHDGILFRDVTTLFQDPRGFRLAVDQLLSPFVGETIDAVAGLEARGFILGGAVAHQLSKGFVSVRKKGKLPAATI 92          
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_GLUOX (Adenine phosphoribosyltransferase OS=Gluconobacter oxydans GN=apt PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.462e-14
Identity = 40/94 (42.55%), Postives = 56/94 (59.57%), Query Frame = 1
Query:   31 QDPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 312
            QDP+   + + IR IPDFPK GI+F DI+TL+    A++                ++AGIE+RGF+   P+AL +G  F  +RKP KLPG+ IS
Sbjct:    4 QDPQPLDLKNYIREIPDFPKRGILFYDISTLIRSPDAWQVATARLARVIAAWQPDILAGIESRGFLTAAPLALRLGCGFTMLRKPGKLPGKTIS 97          
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_ENTFA (Adenine phosphoribosyltransferase OS=Enterococcus faecalis GN=apt PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.462e-14
Identity = 38/82 (46.34%), Postives = 53/82 (64.63%), Query Frame = 1
Query:   64 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVI 309
            I  IPD+P+ GI+F+DI+ L+ +  A+R+     V+  K+K I +V G EARGFI G P+A  +G  F P+RK  KLP E I
Sbjct:    7 IASIPDYPEKGIVFRDISPLMANGDAYREATKQIVDYAKEKRIDMVVGPEARGFIVGCPVAYELGVGFAPVRKKGKLPRETI 88          
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_CLOPH (Adenine phosphoribosyltransferase OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=apt PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.462e-14
Identity = 36/82 (43.90%), Postives = 53/82 (64.63%), Query Frame = 1
Query:   64 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVI 309
            +R IPDFP+ GI+F+D+T++L D  + + +ID   E     +  V+ G E+RGFIFG PIA  +   F+P+RK  KLP E +
Sbjct:    8 VRSIPDFPEEGIIFRDVTSVLQDKDSLKMSIDQMQENLNGLDFDVIVGPESRGFIFGVPIAYNLNKAFIPVRKKGKLPCETV 89          
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_PSE14 (Adenine phosphoribosyltransferase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=apt PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.215e-14
Identity = 38/89 (42.70%), Postives = 54/89 (60.67%), Query Frame = 1
Query:   46 AGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 312
            +   S IR + DFPKPG++F+DIT L    KA R  ID FV+RY + + S +  ++ARGF+ G  +A  +    V  RK  KLP +V+S
Sbjct:    6 SNFKSLIRPVIDFPKPGVVFRDITPLFQSPKATRQVIDSFVQRYIEADFSHIGVMDARGFLIGSVVAYQLNKPLVLFRKQGKLPADVLS 94          
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_NOCSJ (Adenine phosphoribosyltransferase OS=Nocardioides sp. (strain BAA-499 / JS614) GN=apt PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.215e-14
Identity = 41/94 (43.62%), Postives = 57/94 (60.64%), Query Frame = 1
Query:   37 PRIAGISSAIRVI---PDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKN----ISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLP 297
            P   G+S A+ +I   PDFP+PGI+F+DIT LL +  A    +       +D+     +  V G+E+RGFI G P+ALA+G  FVP+RK  KLP
Sbjct:    6 PEAPGLSEALALIADVPDFPQPGILFKDITPLLAEHAALEAVVAALAAPGRDQTGAPVVDKVLGMESRGFILGAPVALALGVGFVPVRKAGKLP 99          
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_NATTJ (Adenine phosphoribosyltransferase OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=apt PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.215e-14
Identity = 40/83 (48.19%), Postives = 51/83 (61.45%), Query Frame = 1
Query:   64 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 312
            IR IPDFPK G++F+DITT L D +   + I      Y+ +    + GIE+RGFI GP IA  +GA FVP RK  KLP +  S
Sbjct:    8 IRDIPDFPKKGVVFKDITTALKDPELLAEIIINLSSHYEKEVPDKIVGIESRGFILGPAIAKELGAGFVPARKGGKLPSKTAS 90          
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_LACGA (Adenine phosphoribosyltransferase OS=Lactobacillus gasseri (strain ATCC 33323 / DSM 20243) GN=apt PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.215e-14
Identity = 40/83 (48.19%), Postives = 49/83 (59.04%), Query Frame = 1
Query:   64 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 312
            I  + DFP  GI+F+DIT +L D K +R       E  K +   V+ G EARGFI G P+A  +G  FVP RKP KLP EV S
Sbjct:    9 IASVKDFPNKGIIFRDITPILQDGKLYRAATHELAEYAKSRGAEVIVGPEARGFIVGCPVATELGIGFVPARKPHKLPREVES 91          
The following BLAST results are available for this feature:
BLAST of CN192054 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_SALTO2.462e-1446.34Adenine phosphoribosyltransferase OS=Salinispora t... [more]
APT_MASHI2.462e-1440.63Adenine phosphoribosyltransferase OS=Mastomys hild... [more]
APT_JANSC2.462e-1446.34Adenine phosphoribosyltransferase OS=Jannaschia sp... [more]
APT_GLUOX2.462e-1442.55Adenine phosphoribosyltransferase OS=Gluconobacter... [more]
APT_ENTFA2.462e-1446.34Adenine phosphoribosyltransferase OS=Enterococcus ... [more]
APT_CLOPH2.462e-1443.90Adenine phosphoribosyltransferase OS=Clostridium p... [more]
APT_PSE143.215e-1442.70Adenine phosphoribosyltransferase OS=Pseudomonas s... [more]
APT_NOCSJ3.215e-1443.62Adenine phosphoribosyltransferase OS=Nocardioides ... [more]
APT_NATTJ3.215e-1448.19Adenine phosphoribosyltransferase OS=Natranaerobiu... [more]
APT_LACGA3.215e-1448.19Adenine phosphoribosyltransferase OS=Lactobacillus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0006E10_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192054 ID=CN192054; Name=CN192054; organism=Citrus sinensis; type=EST; length=312bp
GAGGAAATGGCTTCAGCTGACGTAAAAGCACAAGACCCTCGAATCGCTGG
TATTTCCTCAGCAATTCGTGTCATCCCAGACTTCCCTAAACCAGGGATTA
TGTTTCAAGATATCACAACATTGCTTCTTGATACCAAGGCTTTTAGAGAT
ACTATTGATCTGTTCGTTGAGAGGTACAAGGACAAAAACATCTCTGTTGT
TGCAGGTATTGAAGCTAGGGGTTTTATATTTGGGCCTCCTATTGCATTGG
CTATTGGGGCAAAGTTTGTTCCTATGAGGAAACCTAAGAAGCTTCCTGGG
GAGGTCATTTCC
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