CN192054

Overview
NameCN192054
Unique NameCN192054
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length312
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_SALAR (Adenine phosphoribosyltransferase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=apt PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.102e-22
Identity = 48/87 (55.17%), Postives = 67/87 (77.01%), Query Frame = 1
Query:   52 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 312
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +I+L VERYK   I+ V G EARGF+FG P+AL +G  FVP+RKP+KLP E I+
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYTLSIELLVERYKKAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPRKLPRETIA 97          
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_PHOLL (Adenine phosphoribosyltransferase OS=Photorhabdus luminescens subsp. laumondii GN=apt PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.102e-22
Identity = 48/87 (55.17%), Postives = 65/87 (74.71%), Query Frame = 1
Query:   52 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 312
            I  +I  IPD+PKPG++F+DITTLL +  A++ TIDL VERY+ K I+ + G EARGF+FG P+AL +G  F+P+RK  KLP E +S
Sbjct:   11 IKDSIETIPDYPKPGVLFRDITTLLDNPLAYQATIDLLVERYQGKGITKIVGTEARGFLFGAPVALRLGVGFIPVRKAGKLPRETLS 97          
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_ENT38 (Adenine phosphoribosyltransferase OS=Enterobacter sp. (strain 638) GN=apt PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.102e-22
Identity = 48/87 (55.17%), Postives = 68/87 (78.16%), Query Frame = 1
Query:   52 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 312
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +I+L VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP+KLP E I+
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIELLVERYKNAGITKVVGTEARGFLFGAPVALEMGVGFVPVRKPRKLPRETIA 97          
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_AERHH (Adenine phosphoribosyltransferase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=apt PE=3 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 1.102e-22
Identity = 48/86 (55.81%), Postives = 65/86 (75.58%), Query Frame = 1
Query:   52 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVI 309
            I ++I+ IPD+PKPGI+F+DIT+L+ +  AF+ TIDL    Y+D+ I+ + G EARGFIFG P+A A+G  FVP+RKP KLP  VI
Sbjct:    9 IEASIKTIPDYPKPGILFRDITSLIENADAFKATIDLLANHYRDQGITKIVGTEARGFIFGAPVAYAMGLGFVPVRKPGKLPRAVI 94          
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_SODGM (Adenine phosphoribosyltransferase OS=Sodalis glossinidius (strain morsitans) GN=apt PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.440e-22
Identity = 46/95 (48.42%), Postives = 72/95 (75.79%), Query Frame = 1
Query:   28 AQDPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 312
            A + ++A I  +I+ +PD+PKPGI+F+D+T+LL +++A+  +I L  +R++D  ++ + G EARGF+FG P+ALA+G  FVP+RKP KLP E IS
Sbjct:    3 ATEQQLALIKQSIKSVPDYPKPGILFRDVTSLLENSRAYAASIALLADRFRDAGLTKIVGTEARGFLFGTPVALALGLGFVPVRKPGKLPRETIS 97          
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_VIBCM (Adenine phosphoribosyltransferase OS=Vibrio cholerae serotype O1 (strain M66-2) GN=apt PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.880e-22
Identity = 47/87 (54.02%), Postives = 66/87 (75.86%), Query Frame = 1
Query:   52 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 312
            I S+I+ IPD+PK GI+F+D+T+LL D +A++ TI L VE+YKD   + V G EARGF+FG P+AL +G  FVP+RKP KLP + ++
Sbjct:    9 IKSSIKSIPDYPKKGILFRDVTSLLEDAQAYQATIQLLVEKYKDMGFTKVVGTEARGFLFGAPLALELGVGFVPVRKPGKLPRQTVA 95          
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_VIBCH (Adenine phosphoribosyltransferase OS=Vibrio cholerae GN=apt PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.880e-22
Identity = 47/87 (54.02%), Postives = 66/87 (75.86%), Query Frame = 1
Query:   52 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 312
            I S+I+ IPD+PK GI+F+D+T+LL D +A++ TI L VE+YKD   + V G EARGF+FG P+AL +G  FVP+RKP KLP + ++
Sbjct:    9 IKSSIKSIPDYPKKGILFRDVTSLLEDAQAYQATIQLLVEKYKDMGFTKVVGTEARGFLFGAPLALELGVGFVPVRKPGKLPRQTVA 95          
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_VIBC3 (Adenine phosphoribosyltransferase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=apt PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.880e-22
Identity = 47/87 (54.02%), Postives = 66/87 (75.86%), Query Frame = 1
Query:   52 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 312
            I S+I+ IPD+PK GI+F+D+T+LL D +A++ TI L VE+YKD   + V G EARGF+FG P+AL +G  FVP+RKP KLP + ++
Sbjct:    9 IKSSIKSIPDYPKKGILFRDVTSLLEDAQAYQATIQLLVEKYKDMGFTKVVGTEARGFLFGAPLALELGVGFVPVRKPGKLPRQTVA 95          
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_SHEPW (Adenine phosphoribosyltransferase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=apt PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.880e-22
Identity = 49/90 (54.44%), Postives = 68/90 (75.56%), Query Frame = 1
Query:   43 IAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 312
            +A I ++I+ IPD+PK GI+F+D+T+LL D +A++ TI L VE YK++  + V G EARGF+FG P+AL +G  FVP+RKP KLP E IS
Sbjct:    8 LALIKNSIKTIPDYPKEGILFRDVTSLLEDPQAYKLTIGLLVEHYKEQGFTKVVGTEARGFLFGAPLALELGIGFVPVRKPGKLPRETIS 97          
BLAST of CN192054 vs. ExPASy Swiss-Prot
Match: APT_ACTPJ (Adenine phosphoribosyltransferase OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=apt PE=3 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 1.880e-22
Identity = 51/87 (58.62%), Postives = 66/87 (75.86%), Query Frame = 1
Query:   52 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 312
            I S+I+ IPD+PK GI+F+DIT+LL   +AF+ T+D  V  +KDK I+ V G E+RGFIFG P+ALA+G  FV +RKPKKLP  VIS
Sbjct:    7 IKSSIKSIPDYPKAGIIFRDITSLLEVPEAFKATVDAIVAEFKDKGITKVVGTESRGFIFGAPVALALGVPFVLVRKPKKLPRAVIS 93          
The following BLAST results are available for this feature:
BLAST of CN192054 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_SALAR1.102e-2255.17Adenine phosphoribosyltransferase OS=Salmonella ar... [more]
APT_PHOLL1.102e-2255.17Adenine phosphoribosyltransferase OS=Photorhabdus ... [more]
APT_ENT381.102e-2255.17Adenine phosphoribosyltransferase OS=Enterobacter ... [more]
APT_AERHH1.102e-2255.81Adenine phosphoribosyltransferase OS=Aeromonas hyd... [more]
APT_SODGM1.440e-2248.42Adenine phosphoribosyltransferase OS=Sodalis gloss... [more]
APT_VIBCM1.880e-2254.02Adenine phosphoribosyltransferase OS=Vibrio choler... [more]
APT_VIBCH1.880e-2254.02Adenine phosphoribosyltransferase OS=Vibrio choler... [more]
APT_VIBC31.880e-2254.02Adenine phosphoribosyltransferase OS=Vibrio choler... [more]
APT_SHEPW1.880e-2254.44Adenine phosphoribosyltransferase OS=Shewanella pi... [more]
APT_ACTPJ1.880e-2258.62Adenine phosphoribosyltransferase OS=Actinobacillu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0006E10_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192054 ID=CN192054; Name=CN192054; organism=Citrus sinensis; type=EST; length=312bp
GAGGAAATGGCTTCAGCTGACGTAAAAGCACAAGACCCTCGAATCGCTGG
TATTTCCTCAGCAATTCGTGTCATCCCAGACTTCCCTAAACCAGGGATTA
TGTTTCAAGATATCACAACATTGCTTCTTGATACCAAGGCTTTTAGAGAT
ACTATTGATCTGTTCGTTGAGAGGTACAAGGACAAAAACATCTCTGTTGT
TGCAGGTATTGAAGCTAGGGGTTTTATATTTGGGCCTCCTATTGCATTGG
CTATTGGGGCAAAGTTTGTTCCTATGAGGAAACCTAAGAAGCTTCCTGGG
GAGGTCATTTCC
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