CN192053

Overview
NameCN192053
Unique NameCN192053
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length650
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN192053 vs. ExPASy Swiss-Prot
Match: APT_CLOD6 (Adenine phosphoribosyltransferase OS=Clostridium difficile (strain 630) GN=apt PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.119e-42
Identity = 85/157 (54.14%), Postives = 112/157 (71.34%), Query Frame = -1
Query:  144 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 614
            + + IR I DFPKPGI F+D+TTL  D  AF+  +D  VE  KDK++ +V G EARGF+ G P+A A+G  FVP+RKP KLPGEV S EY LEYG D +E+H  A++ G++  IVDDL+ATGGT+ AA +L+E++G  VV    +IEL  L GRE+L
Sbjct:    3 LKNFIRNIDDFPKPGIDFKDVTTLFKDGDAFKYAVDSIVEELKDKDVDLVIGPEARGFLMGTPVAYALGVGFVPIRKPGKLPGEVESYEYGLEYGTDTLEIHKDAIKKGQKVAIVDDLLATGGTMEAAAKLVEKLGGEVVSMQFLIELKFLNGREKL 159          
BLAST of CN192053 vs. ExPASy Swiss-Prot
Match: APT_BRASO (Adenine phosphoribosyltransferase OS=Bradyrhizobium sp. (strain ORS278) GN=apt PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.119e-42
Identity = 84/157 (53.50%), Postives = 109/157 (69.43%), Query Frame = -1
Query:  144 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 614
            I + +R IPD+PKPGI+F+DITTLL D +AFR  +D  V  +    I  VAGIEARGFI G  +A  + A FVP+RK  KLP + +S  Y+LEYG D MEMHV AVQ GER ++VDDL+ATGGT   A++LL ++G  VV    +I+LP+L G  +L
Sbjct:    7 IKNTVRTIPDYPKPGILFRDITTLLADARAFRRAVDELVHPWAGSKIDKVAGIEARGFILGGAVAHQLSAGFVPIRKKGKLPHKTVSMSYALEYGTDEMEMHVDAVQPGERVILVDDLIATGGTAEGAVKLLRQIGATVVAACFIIDLPDLGGAAKL 163          
BLAST of CN192053 vs. ExPASy Swiss-Prot
Match: APT_BRASB (Adenine phosphoribosyltransferase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=apt PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.119e-42
Identity = 84/157 (53.50%), Postives = 109/157 (69.43%), Query Frame = -1
Query:  144 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 614
            I + +R IPD+PKPGI+F+DITTLL D +AFR  +D  V  +    I  VAGIEARGFI G  +A  + A FVP+RK  KLP + +S  Y+LEYG D MEMHV AVQ GER ++VDDL+ATGGT   A++LL ++G  VV    +I+LP+L G  +L
Sbjct:    7 IKNTVRTIPDYPKPGILFRDITTLLADARAFRRAVDELVHPWAGSKIDKVAGIEARGFILGGAVAHQLSAGFVPIRKKGKLPHKTVSMSYALEYGTDEMEMHVDAVQPGERVILVDDLIATGGTAEGAVKLLRQIGATVVAACFIIDLPDLGGAAKL 163          
BLAST of CN192053 vs. ExPASy Swiss-Prot
Match: APT_SHEDO (Adenine phosphoribosyltransferase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=apt PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 2.768e-42
Identity = 80/160 (50.00%), Postives = 116/160 (72.50%), Query Frame = -1
Query:  144 IAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 623
            +A I  +I+ I D+PKPGIMF+D+T+LL D  A++ TI LFVE+Y+    + V G EARGF+FG P+AL +G  FVP+RKP KLP + I++ Y LEYG D +E+HV A++  ++ L+VDDL+ATGGT+ A ++L+ ++G  V   A VI LP++ G +RL
Sbjct:   10 LALIKQSIKTIADYPKPGIMFRDVTSLLEDASAYQATIALFVEKYQGMGFTKVVGTEARGFLFGAPLALELGIGFVPVRKPGKLPRKTIAQSYELEYGMDTLEIHVDAIKPEDKVLVVDDLLATGGTIEATVKLIRQLGGQVEHAAFVISLPDIGGEKRL 169          
BLAST of CN192053 vs. ExPASy Swiss-Prot
Match: APT_MESSB (Adenine phosphoribosyltransferase OS=Mesorhizobium sp. (strain BNC1) GN=apt PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 2.768e-42
Identity = 84/155 (54.19%), Postives = 109/155 (70.32%), Query Frame = -1
Query:  144 SAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 608
            +AIR IPD+P+PGI+F+DITTLL D +AFR  +D  V  Y    I  +AGIEARGFI G  IA  + + F+P+RK  KLP E +   YSLEYG D MEMH+ AV  GE+ ++VDDL+ATGGT  AA+RLL ++G  +V    VI+LP+L GR +L
Sbjct:   11 AAIRTIPDYPRPGILFRDITTLLGDARAFRRAVDELVHPYAGAKIDKIAGIEARGFILGGAIAHQLSSGFIPIRKKGKLPHETVRVAYSLEYGLDEMEMHIDAVSPGEKVILVDDLIATGGTAEAAVRLLRQMGAEIVAACFVIDLPDLGGRAKL 165          
BLAST of CN192053 vs. ExPASy Swiss-Prot
Match: APT_ACIBL (Adenine phosphoribosyltransferase OS=Acidobacteria bacterium (strain Ellin345) GN=apt PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.614e-42
Identity = 82/166 (49.40%), Postives = 115/166 (69.28%), Query Frame = -1
Query:  117 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 614
            + + +R IPD+PKPGI+F DITTL+ +      TID   E + +KNI +V G+EARGFIFGP +A  + A F+P+RKP+KLPGE +   Y LEYG+D +E+H  A+Q  +R L+VDDL+ATGGT  AA  L++++G  +   A VIEL  L GRERL +  ++ L+
Sbjct:   13 LKAYVREIPDYPKPGILFYDITTLIKEPVGLARTIDGITEHFLNKNIDLVVGMEARGFIFGPAVAYRLNAGFIPIRKPRKLPGETVKHTYKLEYGEDTLEIHKDAIQKAQRVLVVDDLLATGGTAVAATELVKQLGGEICGIAFVIELDFLNGRERLKDYDVYSLL 178          
BLAST of CN192053 vs. ExPASy Swiss-Prot
Match: APT_SALG2 (Adenine phosphoribosyltransferase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=apt PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 4.721e-42
Identity = 80/157 (50.96%), Postives = 116/157 (73.89%), Query Frame = -1
Query:  144 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 614
            + ++I+ I D+PK GI+F+D+T+LL D KA+  +I+L VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP+KLP E I+E Y LEY  D +E+HV A++ G+  L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   11 LKNSIKSIQDYPKLGILFRDVTSLLEDPKAYALSIELLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPRKLPRETIAETYELEYSTDQLEIHVDAIKPGDNVLVVDDLLATGGTIEATVKLIRRLGGKVTDAAFIINLFDLGGEQRL 167          
BLAST of CN192053 vs. ExPASy Swiss-Prot
Match: APT_AGRT5 (Adenine phosphoribosyltransferase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=apt PE=3 SV=2)

HSP 1 Score: 171.014 bits (432), Expect = 4.721e-42
Identity = 84/157 (53.50%), Postives = 112/157 (71.34%), Query Frame = -1
Query:  144 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 614
            +S+AIR IPD+PKPGI+F+DITTLL + +AFR  +D  V+ Y    I  +AG+EARGFI G  +A  + A FVP+RK  KLP   +   YSLEYG D MEMHV AVQ GE+ ++VDDL+ATGGT   A++LL ++G  +V    VI+LP+L GR++L
Sbjct:    8 LSAAIRSIPDYPKPGIIFRDITTLLGNPRAFRRAVDELVQPYAGTKIDKIAGMEARGFILGGAVAHQLSAGFVPIRKKGKLPHTTVRVAYSLEYGVDEMEMHVDAVQPGEKVILVDDLIATGGTAEGAVKLLRQMGAEIVSACFVIDLPDLGGRKKL 164          
BLAST of CN192053 vs. ExPASy Swiss-Prot
Match: APT_THEEB (Adenine phosphoribosyltransferase OS=Thermosynechococcus elongatus (strain BP-1) GN=apt PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 6.165e-42
Identity = 83/167 (49.70%), Postives = 116/167 (69.46%), Query Frame = -1
Query:  114 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLVS 614
            + S IR +PDFPKPGI+F+D+TTLL +    R  ID  VE++ +  I  VAGIE+RGFIFG P+A  +GA F+P+RKP KL   V + EY LEYG+D +EMH  A++ G R LIVDDL+ATGGT +AA  L+++    +   A ++EL +L GR++L + P+  LV+
Sbjct:    3 LKSLIRDVPDFPKPGILFRDLTTLLQNQAGLRYVIDQLVEKHANAGIDYVAGIESRGFIFGAPLAYRLGAGFIPLRKPGKLCAPVYAVEYELEYGRDRLEMHQDAIEPGRRVLIVDDLIATGGTAAAAAGLIQKAQAELYGFAFIVELTDLAGRQKLPDVPITTLVT 169          
BLAST of CN192053 vs. ExPASy Swiss-Prot
Match: APT_PARL1 (Adenine phosphoribosyltransferase OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=apt PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 6.165e-42
Identity = 85/165 (51.52%), Postives = 112/165 (67.88%), Query Frame = -1
Query:  120 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVL 614
            +   IR IPD+PKPGI+F+DITTLL D + FR  +D  V  +K     VVAGIEARGFI G  +A  +G  F+P+RK  KLP   I +EY LEYG D++E+H  AV+  +R L++DDL+ATGGT  AA++L+ R G +V+  + VIELPEL GR RL    + VL
Sbjct:    3 VKDFIRTIPDYPKPGILFRDITTLLSDPEGFRGAVDALVSLHKGAKFDVVAGIEARGFILGGAVAHQLGLGFIPVRKKGKLPFTTIGQEYDLEYGTDMVEIHTDAVKPDQRVLLIDDLIATGGTAEAAVKLIARAGGNVLASSFVIELPELGGRARLEALDIEVL 167          
The following BLAST results are available for this feature:
BLAST of CN192053 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_CLOD62.119e-4254.14Adenine phosphoribosyltransferase OS=Clostridium d... [more]
APT_BRASO2.119e-4253.50Adenine phosphoribosyltransferase OS=Bradyrhizobiu... [more]
APT_BRASB2.119e-4253.50Adenine phosphoribosyltransferase OS=Bradyrhizobiu... [more]
APT_SHEDO2.768e-4250.00Adenine phosphoribosyltransferase OS=Shewanella de... [more]
APT_MESSB2.768e-4254.19Adenine phosphoribosyltransferase OS=Mesorhizobium... [more]
APT_ACIBL3.614e-4249.40Adenine phosphoribosyltransferase OS=Acidobacteria... [more]
APT_SALG24.721e-4250.96Adenine phosphoribosyltransferase OS=Salmonella ga... [more]
APT_AGRT54.721e-4253.50Adenine phosphoribosyltransferase OS=Agrobacterium... [more]
APT_THEEB6.165e-4249.70Adenine phosphoribosyltransferase OS=Thermosynecho... [more]
APT_PARL16.165e-4251.52Adenine phosphoribosyltransferase OS=Parvibaculum ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0006E10_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192053 ID=CN192053; Name=CN192053; organism=Citrus sinensis; type=EST; length=650bp
TAATTCAGATAGGTTTTANTGAAGTTCTCAAGCTTNTGAGCAGAGCCCGA
GCGACTAGAAACCCATATGGTCCACAAACATTGCATTTAAACCATAAACT
GAGATCAAGTTTAGCTTACAAGAACAAATAGTGGTTTCTCTCCCAGCCGT
TCCCGACCCTTTAGCTCTGGCAGTTCAATCACGCATGCACACTCAACCAC
ATGCACCCCAACTCGCTCAAGTAGCCTGATTGCAGCAGACAAGGTCCCAC
CAGTTGCAACTAGATCGTCTACTATTAAAGCACGCTCCCCTGCTTGTACA
GCACCTACATGCATCTCCATTACATCTTTTCCATATTCCAAGGAATACTC
TTCGGAAATGACCTCCCCAGGAAGCTTCTTAGGTTTCCTCATAGGAACAA
ACTTTGCCCCAATAGCCAATGCAATAGGAGGCCCAAATATAAAACCCCTA
GCTTCAATACCTGCAACAACAGAGATGTTTTTGTCCTTGTACCTCTCAAC
GAACAGATCAATAGTATCTCTAAAAGCCTTGGTATCAAGAAGCAATGTTG
TGATATCTTGAAACATAATCCCTGGTTTAGGGAAGTCTGGGATGACACGA
ATTGCTGAGGAAATACCAGCGATTCGAGGGTCTTGTGCTTTTACGTCAGC
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