CN192052

Overview
NameCN192052
Unique NameCN192052
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length774
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN192052 vs. ExPASy Swiss-Prot
Match: KPRS_SALTI (Ribose-phosphate pyrophosphokinase OS=Salmonella typhi GN=prs PE=3 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.171e-11
Identity = 58/188 (30.85%), Postives = 91/188 (48.40%), Query Frame = -2
Query:  219 LVTFDIHAXQERFYFGDTILPCFESAIPLLLNRLQQLPDSDNISIAFPDDGAWKRFH---KQLQHFPMIVCNKVRD-GNQRIVRIKEGDPRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPNASWERFKQDTGGKPESGLTYFWISDSCPVTVKEVMSKPPFEVLSLAGSIASALQ 770
            ++T D+HA Q + +F   +   F S  P+LL  + QL + DN  +  PD G   R     K L    M + +K R   N   V    GD  GR  V+VDD++ +GGTL +  + L   GA ++ AY TH IF   +    +        S +    + D+ P+T  E+ + P    L+L+G +A A++
Sbjct:  125 VLTVDLHAEQIQGFFDVPVDNVFGS--PILLEDMLQL-NLDNPIVVSPDIGGVVRARAIAKLLNDTDMAIIDKRRPRANVSQVMHIIGDVAGRDCVLVDDMIDTGGTLCKAAEALKERGAKRVFAYATHPIFSGNAANNLR-------NSVIDEVVVCDTIPLT-DEIKALPNVRTLTLSGMLAEAIR 301          
BLAST of CN192052 vs. ExPASy Swiss-Prot
Match: KPRS_THETN (Ribose-phosphate pyrophosphokinase OS=Thermoanaerobacter tengcongensis GN=prs PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.529e-11
Identity = 53/186 (28.49%), Postives = 90/186 (48.39%), Query Frame = -2
Query:  222 LVTFDIHAXQERFYFGDTILPCFESAIPLLLNRLQQLPDSDNISIAFPDDGAWKR--FHKQLQHFPMIVCNKVRD-GNQRIVRIKEGDPRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPNASWERFKQDTGGKPESGLTYFWISDSCPVTVKEVMSKPPFEVLSLAGSIASAL 770
            +VT D+HA Q + YF   +        P+L          D++ +  PD G+  R  +  +  + P+ + +K R   N   V    GD +G+  ++VDDL+ + GTL++  + L  HGA +I A  THG+    + ER K       ES +    I+D+ P+  ++ + K   +V S+A   A A+
Sbjct:  128 VVTMDLHAPQIQGYFNIPVDHLLGG--PILAKYFMDKELGDDVVVVSPDHGSVTRARYFAEKLNAPLAIIDKRRPKANVAEVMNIIGDVKGKKAILVDDLIDTAGTLVQAAEALLDHGAVEIYACATHGVLSGPAIERLK-------ESPIKEVVITDTIPLPEEKKIDK--IKVRSVAPLFAEAI 302          
BLAST of CN192052 vs. ExPASy Swiss-Prot
Match: KPRS_ECOLI (Ribose-phosphate pyrophosphokinase OS=Escherichia coli (strain K12) GN=prs PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.529e-11
Identity = 58/188 (30.85%), Postives = 91/188 (48.40%), Query Frame = -2
Query:  219 LVTFDIHAXQERFYFGDTILPCFESAIPLLLNRLQQLPDSDNISIAFPDDGAWKRFH---KQLQHFPMIVCNKVRD-GNQRIVRIKEGDPRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPNASWERFKQDTGGKPESGLTYFWISDSCPVTVKEVMSKPPFEVLSLAGSIASALQ 770
            ++T D+HA Q + +F   +   F S  P+LL  + QL + DN  +  PD G   R     K L    M + +K R   N   V    GD  GR  V+VDD++ +GGTL +  + L   GA ++ AY TH IF   +    +        S +    + D+ P++  E+ S P    L+L+G +A A++
Sbjct:  125 VLTVDLHAEQIQGFFDVPVDNVFGS--PILLEDMLQL-NLDNPIVVSPDIGGVVRARAIAKLLNDTDMAIIDKRRPRANVSQVMHIIGDVAGRDCVLVDDMIDTGGTLCKAAEALKERGAKRVFAYATHPIFSGNAANNLR-------NSVIDEVVVCDTIPLS-DEIKSLPNVRTLTLSGMLAEAIR 301          
BLAST of CN192052 vs. ExPASy Swiss-Prot
Match: KPRS_ECOL6 (Ribose-phosphate pyrophosphokinase OS=Escherichia coli O6 GN=prs PE=3 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.529e-11
Identity = 58/188 (30.85%), Postives = 91/188 (48.40%), Query Frame = -2
Query:  219 LVTFDIHAXQERFYFGDTILPCFESAIPLLLNRLQQLPDSDNISIAFPDDGAWKRFH---KQLQHFPMIVCNKVRD-GNQRIVRIKEGDPRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPNASWERFKQDTGGKPESGLTYFWISDSCPVTVKEVMSKPPFEVLSLAGSIASALQ 770
            ++T D+HA Q + +F   +   F S  P+LL  + QL + DN  +  PD G   R     K L    M + +K R   N   V    GD  GR  V+VDD++ +GGTL +  + L   GA ++ AY TH IF   +    +        S +    + D+ P++  E+ S P    L+L+G +A A++
Sbjct:  125 VLTVDLHAEQIQGFFDVPVDNVFGS--PILLEDMLQL-NLDNPIVVSPDIGGVVRARAIAKLLNDTDMAIIDKRRPRANVSQVMHIIGDVAGRDCVLVDDMIDTGGTLCKAAEALKERGAKRVFAYATHPIFSGNAANNLR-------NSVIDEVVVCDTIPLS-DEIKSLPNVRTLTLSGMLAEAIR 301          
BLAST of CN192052 vs. ExPASy Swiss-Prot
Match: KPRS_ECO57 (Ribose-phosphate pyrophosphokinase OS=Escherichia coli O157:H7 GN=prs PE=3 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.529e-11
Identity = 58/188 (30.85%), Postives = 91/188 (48.40%), Query Frame = -2
Query:  219 LVTFDIHAXQERFYFGDTILPCFESAIPLLLNRLQQLPDSDNISIAFPDDGAWKRFH---KQLQHFPMIVCNKVRD-GNQRIVRIKEGDPRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPNASWERFKQDTGGKPESGLTYFWISDSCPVTVKEVMSKPPFEVLSLAGSIASALQ 770
            ++T D+HA Q + +F   +   F S  P+LL  + QL + DN  +  PD G   R     K L    M + +K R   N   V    GD  GR  V+VDD++ +GGTL +  + L   GA ++ AY TH IF   +    +        S +    + D+ P++  E+ S P    L+L+G +A A++
Sbjct:  125 VLTVDLHAEQIQGFFDVPVDNVFGS--PILLEDMLQL-NLDNPIVVSPDIGGVVRARAIAKLLNDTDMAIIDKRRPRANVSQVMHIIGDVAGRDCVLVDDMIDTGGTLCKAAEALKERGAKRVFAYATHPIFSGNAANNLR-------NSVIDEVVVCDTIPLS-DEIKSLPNVRTLTLSGMLAEAIR 301          
BLAST of CN192052 vs. ExPASy Swiss-Prot
Match: KPRS_PASMU (Ribose-phosphate pyrophosphokinase OS=Pasteurella multocida GN=prs PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.608e-11
Identity = 53/188 (28.19%), Postives = 92/188 (48.94%), Query Frame = -2
Query:  219 LVTFDIHAXQERFYFGDTILPCFESAIPLLLNRLQQLPDSDNISIAFPDDGAWKRFH---KQLQHFPMIVCNKVRD-GNQRIVRIKEGDPRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPNASWERFKQDTGGKPESGLTYFWISDSCPVTVKEVMSKPPFEVLSLAGSIASALQ 770
            ++T D+HA Q + +F   +   F S  P+L++ + +  D  N  +  PD G   R     K L    M + +K R   N   V    GD  GR  ++VDD++ +GGTL +  + L   GA ++ AY TH +F  ++ +    D        L    ++D+ P++  E+ +     VL+L+G +A A++
Sbjct:  125 VLTCDLHAEQIQGFFDVPVDNVFGS--PVLVHDMLKKIDMQNPIVVSPDIGGVVRARAIAKLLNDTDMAIIDKRRPRANVAQVMHIIGDVAGRDCILVDDMIDTGGTLCKAAEALKERGAKRVFAYATHAVFSGSAAKNLASD-------ALDEVVVTDTIPLS-PEIKALNKVRVLTLSGMLAEAIR 302          
BLAST of CN192052 vs. ExPASy Swiss-Prot
Match: KPRS_STRCO (Ribose-phosphate pyrophosphokinase OS=Streptomyces coelicolor GN=prs PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.406e-11
Identity = 52/189 (27.51%), Postives = 90/189 (47.62%), Query Frame = -2
Query:  219 LVTFDIHAXQERFYFGDTILPCFESAIPLLLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQHF--PMIVCNKVRD---GNQRIVRIKEGDPRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPNASWERFKQDTGGKPESGLTYFWISDSCPVTVKEVMSKPPFEVLSLAGSIASALQ 770
            ++  D+H  Q + +F   +   F  A+PLL + +    D   +++  PD G  +   +       P+ + +K RD    NQ  V    GD +GR  V+VDD++ +GGT+      L AHGA  +    THG+    + +R K        S ++ F  +++ P   +  + K    VLS+A +IA A++
Sbjct:  132 ILAVDLHTDQIQGFFDGPVDHLF--ALPLLADYVGAKVDRSKLTVVSPDAGRVRVADRWCDRLGAPLAIVHKRRDKDVANQVTVHEVVGDVKGRICVLVDDMIDTGGTICAAADALFAHGAEDVIVTATHGVLSGPAADRLK-------NSKVSEFVFTNTLPSASELELDK--ITVLSIAPTIARAVR 309          
BLAST of CN192052 vs. ExPASy Swiss-Prot
Match: KPRS_AGRT5 (Ribose-phosphate pyrophosphokinase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=prs PE=3 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 5.811e-11
Identity = 56/188 (29.79%), Postives = 89/188 (47.34%), Query Frame = -2
Query:  222 LVTFDIHAXQERFYFGDTILPCFESAIPLLLNRLQQLPDSDNISIAFPDDGAWKR---FHKQLQHFPMIVCNKVRD--GNQRIVRIKEGDPRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPNASWERFKQDTGGKPESGLTYFWISDSCPVTVKEVMSKPPFEVLSLAGSIASAL 770
            ++T D+HA Q + +F       F  A P+L   ++   D++N+ +  PD G   R     K+L     IV +K RD  G   ++ +  GD  G+  +++DD++ SGGTL    + L   GA  ++AY+THG+    +  R          S L    I+DS   T   V S     V+S AG +  A+
Sbjct:  121 VLTLDLHAGQIQGFFDIPTDNLF--AAPILARDVKDHYDTNNVMVVSPDVGGVVRARALSKRLDCLLAIV-DKRRDRPGESEVMNVI-GDVSGKDCILIDDIIDSGGTLCNAAEALLKKGATSVTAYITHGVLSGGAVARV-------ASSKLRELVITDSIQPTT-GVQSAHNIRVVSTAGLLGEAI 296          
BLAST of CN192052 vs. ExPASy Swiss-Prot
Match: KPRS_SYNPX (Ribose-phosphate pyrophosphokinase OS=Synechococcus sp. (strain WH8102) GN=prs PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.911e-11
Identity = 52/188 (27.66%), Postives = 95/188 (50.53%), Query Frame = -2
Query:  222 LVTFDIHAXQERFYFGDTILPCFES-AIPLLLNRLQQLPDSDNISIAFPDDGAWKR---FHKQLQHFPMIVCNKVRDGNQRIVRIKE-GDPRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPNASWERFKQDTGGKPESGLTYFWISDSCPVTVKEVMSKPPFEVLSLAGSIASAL 770
            ++  D+H+ Q + YF    +PC      P+L++ L    + D+I +  PD G   R   F KQ+   P+ + +K R G+     +   GD  GR  +++DD++ +GGT+    ++L   GA ++ A  TH +F   + ER   D  G  E  +    +++S P  +++  + P  +VLS+A  +  A+
Sbjct:  142 VLAMDLHSAQIQGYFD---IPCDHIYGSPVLVDYLST-QNLDDIVVVSPDVGGVARARAFAKQMNDAPLAIIDKRRTGHNLAESLTVIGDVSGRTAILIDDMIDTGGTICAGARLLRQQGAKRVIACATHAVFSPPASERLSAD--GLFEQVV----VTNSIP--IQQERTFPQLQVLSVANMLGEAI 317          
BLAST of CN192052 vs. ExPASy Swiss-Prot
Match: KPRS_GLOVI (Ribose-phosphate pyrophosphokinase OS=Gloeobacter violaceus GN=prs PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.911e-11
Identity = 53/187 (28.34%), Postives = 89/187 (47.59%), Query Frame = -2
Query:  222 LVTFDIHAXQERFYFGDTILPCFESAIPLLLNRLQQLPDSDNISIAFPDDGAWKR---FHKQLQHFPMIVCNKVRDG-NQRIVRIKEGDPRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPNASWERFKQDTGGKPESGLTYFWISDSCPVTVKEVMSKPPFEVLSLAGSIASAL 770
            ++  D+H+ Q + YF   +   + S + L   + +QL D   + I  PD G   R   F K+L   P+ + +K R   N+  V    GD +G+  ++VDD++ + GT+ E  KVL   GA ++ A  TH +F + + +R    T        T   ++++ PV        P   VLS+A  I  A+
Sbjct:  144 VLAMDLHSAQIQAYFDIPLDHVYGSPVLLQYIKEKQLGD---MVIVSPDVGGVSRARAFAKKLDDAPLAIVDKRRQAPNEVEVMNVIGDVKGKTAILVDDMIDTAGTISEAAKVLLRQGAKEVYACATHAVFSSRAIDRLSDGT-------FTEVLVTNTIPVPPDRRF--PQLRVLSVADLIGEAI 318          
The following BLAST results are available for this feature:
BLAST of CN192052 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
KPRS_SALTI1.171e-1130.85Ribose-phosphate pyrophosphokinase OS=Salmonella t... [more]
KPRS_THETN1.529e-1128.49Ribose-phosphate pyrophosphokinase OS=Thermoanaero... [more]
KPRS_ECOLI1.529e-1130.85Ribose-phosphate pyrophosphokinase OS=Escherichia ... [more]
KPRS_ECOL61.529e-1130.85Ribose-phosphate pyrophosphokinase OS=Escherichia ... [more]
KPRS_ECO571.529e-1130.85Ribose-phosphate pyrophosphokinase OS=Escherichia ... [more]
KPRS_PASMU2.608e-1128.19Ribose-phosphate pyrophosphokinase OS=Pasteurella ... [more]
KPRS_STRCO3.406e-1127.51Ribose-phosphate pyrophosphokinase OS=Streptomyces... [more]
KPRS_AGRT55.811e-1129.79Ribose-phosphate pyrophosphokinase OS=Agrobacteriu... [more]
KPRS_SYNPX9.911e-1127.66Ribose-phosphate pyrophosphokinase OS=Synechococcu... [more]
KPRS_GLOVI9.911e-1128.34Ribose-phosphate pyrophosphokinase OS=Gloeobacter ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0006E09_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192052 ID=CN192052; Name=CN192052; organism=Citrus sinensis; type=EST; length=774bp
GAGGAAAAAACACATAATAGTTTGATTTTATTCAATCAGATTCAGATCAA
AACACCAGTAAATGTTTGAATAAACAAAAGCAAACGAGTATCCAAAAATA
ATATATCCCTGCCGCTTTCTTTTGTTTTTCTTTATTCATTGGTAAGATTG
CTCCTTCAAAATCAGCTCGGAACTCCTCTATATATGATATGACTAGATAT
TTCAAAACAAATTTATATCTGTAGAGCAGATGCAATGGAACCCGCAAGAC
TGAGAACTTCAAATGGTGGTTTGCTCATAACCTCTTTTACAGTCACTGGG
CAGGAGTCACTAATCCAGAAGTAGGTCAAGCCAGACTCAGGTTTTCCTCC
AGTATCTTGTTTAAATCGTTCCCACGACGCGTTAGGAAAAATCCCATGTG
TCACATAAGCGCTTATTTTTGCTGCTCCATGGGCTGCTAGCACTTTCTGA
CATTCAATTAGAGTGCCACCTGATTGAACCAGATCATCAACAATCACAAT
GTGGCGTCCTCGAGGGTCTCCCTCCTTAATGCGTACAATCCTTTGGTTAC
CATCCCGAACTTTATTACAAACAATCATTGGAAAGTGCTGCAGCTGCTTA
TGAAATCGTTTCCACGCACCATCATCAGGAAAAGCAATGGAAATATTGTC
AGAATCAGGGAGCTGTTGGAGCCTATTTAACAGCAAAGGTATTGCACTTT
CAAAGCATGGTAAAATAGTATCACCAAAGTAGAACCTCTCCTGNCATGCA
TGTATATCAAATGTCACTAAGCTA
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