CN192013
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN192013 vs. ExPASy Swiss-Prot
Match: SYN_ECO24 (Asparaginyl-tRNA synthetase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=asnS PE=3 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 6.574e-52 Identity = 101/183 (55.19%), Postives = 128/183 (69.95%), Query Frame = 3 Query: 6 AEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMISFL 554 AEA +K++ +L+ DDM+F A+ DK ++RL F ++ YT G+ FEN V WG+DL+SEHERYL E F+ PV+V NYPK IKAFYMRLN+D KTVAAMDVL P +GE+IGGSQREER DV+ R+ +MGL E Y WY DLRR+GTV HSGFGLGFER+I+++ Sbjct: 266 AEAMLKYVFKAVLEERADDMKFFAERVDKDAVSRLERFIEADFAQVDYTDAVTILENC---GRKFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDERMLEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYV 445
BLAST of CN192013 vs. ExPASy Swiss-Prot
Match: SYN_SHESW (Asparaginyl-tRNA synthetase OS=Shewanella sp. (strain W3-18-1) GN=asnS PE=3 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 8.586e-52 Identity = 103/187 (55.08%), Postives = 131/187 (70.05%), Query Frame = 3 Query: 6 AEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMISFLPQAS 566 AEA +K+ + +L DD++F A++ DK+ I RL+ S+ F ++ YT K GK FE V WGIDL+SEHERYL E F+ PV+V NYPK IKAFYMRLN+D KTVAAMDVL P +GE+IGGSQREER DV+ R+ +M L E Y WY DLRR+GTV H+GFGLGFER++S++ S Sbjct: 266 AEAMLKYAFNAVLTERMDDLQFFAQHVDKTVIERLQSFVSSDFAQVDYTDAVDILQ---KCGKTFEFPVSWGIDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDMRLAEMDLNKEDYWWYRDLRRYGTVPHAGFGLGFERLVSYVTGVS 449
BLAST of CN192013 vs. ExPASy Swiss-Prot
Match: SYN_SHESM (Asparaginyl-tRNA synthetase OS=Shewanella sp. (strain MR-4) GN=asnS PE=3 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 8.586e-52 Identity = 102/187 (54.55%), Postives = 131/187 (70.05%), Query Frame = 3 Query: 6 AEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMISFLPQAS 566 AE +K+ + +L DD++F A++ DK+ I RL+ S+ F ++ YT K G+ FE V WGIDL+SEHERYL E F+ PV+V NYPK IKAFYMRLN+D KTVAAMDVL P +GE+IGGSQREER DV+ R+E+M L E Y WY DLRR+GTV H+GFGLGFER++S++ S Sbjct: 266 AEGMLKYAFNAVLAERMDDLQFFAQHVDKTVIERLQSFVSSDFAQVDYTDAVEILQ---KCGREFEFPVSWGIDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDMRLEEMDLNKEDYWWYRDLRRYGTVPHAGFGLGFERLVSYVTGVS 449
BLAST of CN192013 vs. ExPASy Swiss-Prot
Match: SYN_SHEPC (Asparaginyl-tRNA synthetase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=asnS PE=3 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 8.586e-52 Identity = 103/187 (55.08%), Postives = 131/187 (70.05%), Query Frame = 3 Query: 6 AEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMISFLPQAS 566 AEA +K+ + +L DD++F A++ DK+ I RL+ S+ F ++ YT K GK FE V WGIDL+SEHERYL E F+ PV+V NYPK IKAFYMRLN+D KTVAAMDVL P +GE+IGGSQREER DV+ R+ +M L E Y WY DLRR+GTV H+GFGLGFER++S++ S Sbjct: 266 AEAMLKYAFNAVLTERMDDLQFFAQHVDKTVIERLQSFVSSDFAQVDYTDAVDILQ---KCGKTFEFPVSWGIDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDMRLAEMDLNKEDYWWYRDLRRYGTVPHAGFGLGFERLVSYVTGVS 449
BLAST of CN192013 vs. ExPASy Swiss-Prot
Match: SYN_ERWCT (Asparaginyl-tRNA synthetase OS=Erwinia carotovora subsp. atroseptica GN=asnS PE=3 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 8.586e-52 Identity = 100/183 (54.64%), Postives = 127/183 (69.40%), Query Frame = 3 Query: 6 AEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMISFL 554 AE +K++ +L+ DDM F A+ DK + RL S+ F ++ YT G+ FEN V WG+DL+SEHERYL E F+ PV+V NYPK IKAFYMR+NDD KTVAAMDVL P +GE+IGGSQREER + SR+E+MGL E Y WY DLRR+GT+ HSGFGLGFER+I+++ Sbjct: 266 AENLLKYVFQAVLNERADDMAFFAERVDKEAVTRLEKFVSSDFAQVDYTDAVEILLNC---GQQFENPVYWGVDLSSEHERYLAEQHFKAPVVVKNYPKDIKAFYMRMNDDGKTVAAMDVLAPGIGEIIGGSQREERLAALDSRLEEMGLNKEDYWWYRDLRRYGTIPHSGFGLGFERLIAYV 445
BLAST of CN192013 vs. ExPASy Swiss-Prot
Match: SYN_SHIDS (Asparaginyl-tRNA synthetase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=asnS PE=3 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.121e-51 Identity = 101/183 (55.19%), Postives = 128/183 (69.95%), Query Frame = 3 Query: 6 AEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMISFL 554 AEA +K++ +L+ DDM+F A+ DK ++RL F ++ YT G+ FEN V WG+DL+SEHERYL E F+ PV+V NYPK IKAFYMRLN+D KTVAAMDVL P +GE+IGGSQREER DV+ R+ +MGL E Y WY DLRR+GTV HSGFGLGFER+I+++ Sbjct: 266 AEAMLKYVFKAVLEERADDMKFFAERVDKDAVSRLERFIEADFAQVDYTDAVTILENC---GRKFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDVRMLEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYV 445
BLAST of CN192013 vs. ExPASy Swiss-Prot
Match: SYN_SHEFN (Asparaginyl-tRNA synthetase OS=Shewanella frigidimarina (strain NCIMB 400) GN=asnS PE=3 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 1.465e-51 Identity = 102/183 (55.74%), Postives = 126/183 (68.85%), Query Frame = 3 Query: 6 AEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMISFL 554 AE +KF +L+ DD+ F + DK+ I RL+ S+ F ++ YT GK FE VEWGIDL SEHERYL E F+ PV+V NYPK IKAFYMRLNDD KTVAAMDVL P +GE+IGG+QREER DV+ +R+ +M L E Y WY DLRR+GTV HSGFGLGFER++S++ Sbjct: 266 AEKMLKFAFSAVLEERMDDLNFFNERVDKTVIERLQAFVSSDFAQVDYTDAVEILKNC---GKKFEFAVEWGIDLQSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNDDGKTVAAMDVLAPGIGEIIGGAQREERLDVLDARLAEMDLSQEDYWWYRDLRRYGTVPHSGFGLGFERLVSYV 445
BLAST of CN192013 vs. ExPASy Swiss-Prot
Match: SYN_HAES2 (Asparaginyl-tRNA synthetase OS=Haemophilus somnus (strain 2336) GN=asnS PE=3 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 2.498e-51 Identity = 103/183 (56.28%), Postives = 129/183 (70.49%), Query Frame = 3 Query: 6 AEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMISFL 554 AE +K++ +L+ DD++F K+ DK+ I RL+ ++ F +I YT K GK FE V WGIDL+SEHERYL E F+ PV+V NYPK IKAFYMRLNDD KTVAAMDVL P +GE+IGGSQREER +V+ RI +MGL E Y WY DLRR+GTV H+GFGLGFER+I ++ Sbjct: 267 AEDMLKYVFRAVLNEREDDLKFFEKHVDKNVITRLKDFINSDFAQIDYTDAIDILL---KSGKAFEFPVSWGIDLSSEHERYLAEEYFKSPVVVKNYPKDIKAFYMRLNDDGKTVAAMDVLAPGIGEIIGGSQREERLEVLDKRIAEMGLKAEDYWWYRDLRRYGTVPHAGFGLGFERLIVYV 446
BLAST of CN192013 vs. ExPASy Swiss-Prot
Match: SYN_HAES1 (Asparaginyl-tRNA synthetase OS=Haemophilus somnus (strain 129Pt) GN=asnS PE=3 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 2.498e-51 Identity = 103/183 (56.28%), Postives = 129/183 (70.49%), Query Frame = 3 Query: 6 AEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMISFL 554 AE +K++ +L+ DD++F K+ DK+ I RL+ ++ F +I YT K GK FE V WGIDL+SEHERYL E F+ PV+V NYPK IKAFYMRLNDD KTVAAMDVL P +GE+IGGSQREER +V+ RI +MGL E Y WY DLRR+GTV H+GFGLGFER+I ++ Sbjct: 267 AEDMLKYVFRAVLNEREDDLKFFEKHVDKNVITRLKDFINSDFAQIDYTDAIDILL---KSGKAFEFPVSWGIDLSSEHERYLAEEYFKSPVVVKNYPKDIKAFYMRLNDDGKTVAAMDVLAPGIGEIIGGSQREERLEVLDKRIAEMGLKAEDYWWYRDLRRYGTVPHAGFGLGFERLIVYV 446
BLAST of CN192013 vs. ExPASy Swiss-Prot
Match: SYN_DESPS (Asparaginyl-tRNA synthetase OS=Desulfotalea psychrophila GN=asnS PE=3 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 2.498e-51 Identity = 98/183 (53.55%), Postives = 128/183 (69.95%), Query Frame = 3 Query: 6 AEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMISFL 554 AE +K++ +L+HC DM K K I RL+ V + F R+TYT G+ F+ V+WGIDL SEHERYLTE +++P+IV +YP IK FYMR+N+D KTVAAMD+LVP +GEL+GGSQREERYD++ R+E GL LE Y WYLDLR++GTV H+GFGLGFER++ F+ Sbjct: 249 AEEMLKYVLADVLEHCVTDMNLFDKFISKGIIERLQSVLAHDFARVTYTEAVDQLLA---SGQKFDFAVKWGIDLQSEHERYLTEQVYKRPLIVTDYPAAIKPFYMRMNEDGKTVAAMDILVPGIGELVGGSQREERYDLLAERMEAAGLDLEEYGWYLDLRKYGTVPHAGFGLGFERLVQFV 428 The following BLAST results are available for this feature:
BLAST of CN192013 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 301
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Sequences
The
following sequences are available for this feature:
EST sequence >CN192013 ID=CN192013; Name=CN192013; organism=Citrus sinensis; type=EST; length=571bpback to top |