CN191952

Overview
NameCN191952
Unique NameCN191952
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length620
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN191952 vs. ExPASy Swiss-Prot
Match: PLCA_SHEEP (1-acyl-sn-glycerol-3-phosphate acyltransferase alpha OS=Ovis aries GN=AGPAT1 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 8.385e-14
Identity = 42/117 (35.90%), Postives = 62/117 (52.99%), Query Frame = 3
Query:  219 IIWYPLFGQLYVLAKHIRIDRSNPSAAIQSLKEAAHAIVKDNLSLIIFPEGTRSQNGRLLPFKKGFVHMALQSRLPIVPIVLSGTHRAWRKGSLHIRPVPITVKYLPPXSTSDWTAD 569
            ++W    G    LA  I IDR     AI  + E A  ++  ++ + +FPEGTR+ NG +LPFK+G  H+A+Q+++PIVPIV+S     + K           V+ LPP  T     D
Sbjct:  129 LLWAGSAGLACWLAGVIFIDRKRTGDAISVMSEVAQTLLTQDVRVWVFPEGTRNHNGSMLPFKRGAFHLAVQAQVPIVPIVMSSYQDFYCKKERRFTSGRCQVRVLPPVPTEGLKPD 245          
BLAST of CN191952 vs. ExPASy Swiss-Prot
Match: PLCA_BOVIN (1-acyl-sn-glycerol-3-phosphate acyltransferase alpha OS=Bos taurus GN=AGPAT1 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 8.385e-14
Identity = 42/117 (35.90%), Postives = 62/117 (52.99%), Query Frame = 3
Query:  219 IIWYPLFGQLYVLAKHIRIDRSNPSAAIQSLKEAAHAIVKDNLSLIIFPEGTRSQNGRLLPFKKGFVHMALQSRLPIVPIVLSGTHRAWRKGSLHIRPVPITVKYLPPXSTSDWTAD 569
            ++W    G    LA  I IDR     AI  + E A  ++  ++ + +FPEGTR+ NG +LPFK+G  H+A+Q+++PIVPIV+S     + K           V+ LPP  T     D
Sbjct:  129 LLWAGSAGLACWLAGVIFIDRKRTGDAISVMSEVAQTLLTQDVRVWVFPEGTRNHNGSMLPFKRGAFHLAVQAQVPIVPIVMSSYQDFYCKKERRFTSGRCQVRVLPPVPTEGLKPD 245          
BLAST of CN191952 vs. ExPASy Swiss-Prot
Match: YLD2_SCHPO (Uncharacterized acyltransferase C1851.02 OS=Schizosaccharomyces pombe GN=SPAC1851.02 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.186e-13
Identity = 43/131 (32.82%), Postives = 73/131 (55.73%), Query Frame = 3
Query:  201 VLEINTIIWYPLFGQLYVLAKHIRIDRSNPSAAIQSLKEAAHAIVKDNLSLIIFPEGTRSQNGR--LLPFKKGFVHMALQSRLPIVPIVLSGTHRAWRKGSLHIRPVPITVKYLPPXSTSDWTADKLDDYI 587
            V+   ++ + P+ G   +L+  + IDRS  S AIQ   +AA  + K+N+S+ +F EGTRS + +  LLP KKG  H+A+Q+++PI+PI +      +   +         +K L P  T   TA+ ++D +
Sbjct:  126 VIAKKSLRYVPILGWFMILSDVVFIDRSRRSDAIQLFAKAARRMRKENISIWVFAEGTRSYSLKPCLLPLKKGAFHLAVQAQVPIIPIAIQTYGHLFHPPTKVFNKGEALIKVLDPIPTEGKTAEDVNDLL 256          
BLAST of CN191952 vs. ExPASy Swiss-Prot
Match: PLCB_HUMAN (1-acyl-sn-glycerol-3-phosphate acyltransferase beta OS=Homo sapiens GN=AGPAT2 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.697e-12
Identity = 38/109 (34.86%), Postives = 60/109 (55.05%), Query Frame = 3
Query:  273 IDRSNPSAAIQSLKEAAHAIVKDNLSLIIFPEGTRSQNGRLLPFKKGFVHMALQSRLPIVPIVLSGTHRAWRKGSLHIRPVPITVKYLPPXSTSDWTADKLDDYIKMVH 599
            I+R   S A+  + +    +V++NL + I+PEGTR+ NG LLPFKKG  ++A+Q+++PIVP+V S     +           +TV+ L    TS  TA  +   +   H
Sbjct:  141 INRQRSSTAMTVMADLGERMVRENLKVWIYPEGTRNDNGDLLPFKKGAFYLAVQAQVPIVPVVYSSFSSFYNTKKKFFTSGTVTVQVLEAIPTSGLTAADVPALVDTCH 249          
BLAST of CN191952 vs. ExPASy Swiss-Prot
Match: PLC2_CAEEL (Putative 1-acyl-sn-glycerol-3-phosphate acyltransferase acl-2 OS=Caenorhabditis elegans GN=acl-2 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 7.848e-12
Identity = 46/162 (28.40%), Postives = 79/162 (48.77%), Query Frame = 3
Query:  132 AFSLCDF*TPLD*LTSLMHLW---VYVLEINTIIWYPLFGQLYVLAKHIRIDRSNPSAAIQSLKEAAHAIVKDNLSLIIFPEGTRSQNGRLLPFKKGFVHMALQSRLPIVPIVLSGTHRAWRK-GSLHIRPVPITVKYLPPXSTSDWTADKLDDYIKMVHDM 605
            A  +C+  + LD + S+  +W     V+    + + P F      +  I IDR N   A+ S+   A  +   NL L +FPEGTR++ G  +PFKKG  ++A+++++PI+P+V S     + K G        + ++ L    T   T D + +   M  D+
Sbjct:   92 AVVICNHQSSLD-ILSMASIWPKNCVVMMKRILAYVPFFNLGAYFSNTIFIDRYNRERAMASVDYCASEMKNRNLKLWVFPEGTRNREGGFIPFKKGAFNIAVRAQIPIIPVVFSDYRDFYSKPGRYFKNDGEVVIRVLDAIPTKGLTLDDVSELSDMCRDV 252          
The following BLAST results are available for this feature:
BLAST of CN191952 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
PLCA_SHEEP8.385e-1435.901-acyl-sn-glycerol-3-phosphate acyltransferase alp... [more]
PLCA_BOVIN8.385e-1435.901-acyl-sn-glycerol-3-phosphate acyltransferase alp... [more]
YLD2_SCHPO3.186e-1332.82Uncharacterized acyltransferase C1851.02 OS=Schizo... [more]
PLCB_HUMAN2.697e-1234.861-acyl-sn-glycerol-3-phosphate acyltransferase bet... [more]
PLC2_CAEEL7.848e-1228.40Putative 1-acyl-sn-glycerol-3-phosphate acyltransf... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0006B22_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006B22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN191952 ID=CN191952; Name=CN191952; organism=Citrus sinensis; type=EST; length=620bp
GAGGATAAGCAATCATGCGTCTCCTATCGACATCTTTCTCCTAATGTGGT
TGACTCCAACGGGCACTGTTGGCATTGCAAAGAAAGAGGTATGAGTTAAT
CCTTTAAGAATTAACCTTGAATCTAATTTTGGCTTTCAGTTTGTGTGATT
TCTGAACGCCTCTGGACTGATTGACTTCATTGATGCATTTGTGGGTTTAT
GTTCTTGAAATCAACACGATCATATGGTATCCTCTATTTGGGCAACTTTA
TGTTTTGGCCAAACATATCCGCATAGATCGCTCCAACCCGAGTGCAGCCA
TCCAGTCTTTGAAAGAGGCGGCTCATGCTATTGTGAAAGACAATCTGTCT
TTGATCATATTTCCTGAGGGCACCAGGTCCCAAAATGGAAGACTGCTTCC
CTTCAAAAAGGGTTTTGTTCATATGGCGTTGCAATCCCGCCTCCCAATAG
TTCCAATTGTCCTATCCGGTACCCATCGAGCATGGAGGAAGGGCAGCTTA
CATATTCGGCCAGTACCTATAACTGTAAAGTACCTTCCTCCGANTAGTAC
CAGTGACTGGACAGCTGACAAGCTTGATGATTACATAAAAATGGTGCACG
ACATGTATGTCAAAAACCTC
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