CX301777
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX301777 vs. ExPASy Swiss-Prot
Match: SUB2_ASPCL (ATP-dependent RNA helicase sub2 OS=Aspergillus clavatus GN=sub2 PE=3 SV=1) HSP 1 Score: 304.679 bits (779), Expect = 9.396e-86 Identity = 151/212 (71.23%), Postives = 181/212 (85.38%), Query Frame = 2 Query: 23 GGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTLS 652 GG I+ ++L N+ P IVVGTPGR+ AL RDK LSL+NV+ F+LDECDKML+ +DMRRDVQEIF+ TP DKQVMMFSATLS+EIRP+CKKFM++P+E+YVDD+ KLTLHGL Q+YIKLSE EKNRKLN+LLD+L+FNQV+IFVKS RA EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE NKRI VATD+ GRGIDIER+ L+ Sbjct: 163 GGTPIQKDVEVLSNKESYPNIVVGTPGRLNALVRDKKLSLRNVKAFVLDECDKMLDQIDMRRDVQEIFRATPADKQVMMFSATLSQEIRPICKKFMRNPLEVYVDDDTKLTLHGLQQYYIKLSESEKNRKLNELLDSLEFNQVIIFVKSTLRANELDKLLRECNFPSIAVHSGVSQEERIKRYKEFKEFNKRICVATDVFGRGIDIERINLA 374 HSP 2 Score: 32.3426 bits (72), Expect = 9.396e-86 Identity = 12/19 (63.16%), Postives = 16/19 (84.21%), Query Frame = 1 Query: 643 HIVINYDMPDSADTYLHRV 699 ++ INYD+P AD+YLHRV Sbjct: 372 NLAINYDLPADADSYLHRV 390
BLAST of CX301777 vs. ExPASy Swiss-Prot
Match: SUB2_LODEL (ATP-dependent RNA helicase SUB2 OS=Lodderomyces elongisporus GN=SUB2 PE=3 SV=1) HSP 1 Score: 304.294 bits (778), Expect = 9.397e-86 Identity = 149/212 (70.28%), Postives = 178/212 (83.96%), Query Frame = 2 Query: 23 GGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTLS 652 GG +K + LKN+ CP IVV TPGR+ AL ++K + L NV+ F++DECDK+LESLDMRRDVQ+IF+ TPH KQVMMFSATLS++IRPVCKKFMQ+P+EIYVDDEAKLTLHGL Q+YIKL E EKNRKL+DLLD+L+FNQV+IFVKS RA ELNKLL CNFPSI +HSG+ QEER+ RYK FKE NKRI V+TD+ GRGIDIER+ L+ Sbjct: 154 GGTPVKRDIEKLKNKDTCPHIVVATPGRLHALVQEKAIRLNNVKSFVIDECDKVLESLDMRRDVQDIFRATPHQKQVMMFSATLSQDIRPVCKKFMQNPLEIYVDDEAKLTLHGLQQYYIKLEEKEKNRKLSDLLDSLEFNQVIIFVKSTQRANELNKLLCACNFPSIAVHSGLPQEERIERYKSFKEFNKRICVSTDVFGRGIDIERINLA 365 HSP 2 Score: 32.7278 bits (73), Expect = 9.397e-86 Identity = 12/19 (63.16%), Postives = 16/19 (84.21%), Query Frame = 1 Query: 643 HIVINYDMPDSADTYLHRV 699 ++ INYD+P+ AD YLHRV Sbjct: 363 NLAINYDLPNEADQYLHRV 381
BLAST of CX301777 vs. ExPASy Swiss-Prot
Match: UAP56_DROME (ATP-dependent RNA helicase WM6 OS=Drosophila melanogaster GN=Hel25E PE=1 SV=1) HSP 1 Score: 300.827 bits (769), Expect = 9.398e-86 Identity = 150/209 (71.77%), Postives = 176/209 (84.21%), Query Frame = 2 Query: 23 GGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTL 649 GG+ I+ ++ LK+ P IVVGTPGRILAL R+K L+LK ++HF+LDECDKMLE LDMRRDVQEIF+ TPH KQVMMFSATLSK+IRPVCKKFMQDPME+YVDDEAKLTLHGL QHY+ L E EKN+KL +LLD L+FNQVVIFVKSV R L++LL E NFP+I IH GM+QEERL RY+ FK+ KRILVAT+L GRG+DIERV + Sbjct: 147 GGMAIQKDEETLKSGTPHIVVGTPGRILALIRNKKLNLKLLKHFVLDECDKMLEQLDMRRDVQEIFRSTPHGKQVMMFSATLSKDIRPVCKKFMQDPMEVYVDDEAKLTLHGLQQHYVNLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCVALSQLLTEQNFPAIGIHRGMTQEERLNRYQQFKDFQKRILVATNLFGRGMDIERVNI 355 HSP 2 Score: 36.1946 bits (82), Expect = 9.398e-86 Identity = 14/19 (73.68%), Postives = 17/19 (89.47%), Query Frame = 1 Query: 643 HIVINYDMPDSADTYLHRV 699 +IV NYDMP+ +DTYLHRV Sbjct: 354 NIVFNYDMPEDSDTYLHRV 372
BLAST of CX301777 vs. ExPASy Swiss-Prot
Match: SUB2_AJECN (ATP-dependent RNA helicase SUB2 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=SUB2 PE=3 SV=2) HSP 1 Score: 304.294 bits (778), Expect = 1.226e-85 Identity = 148/212 (69.81%), Postives = 182/212 (85.85%), Query Frame = 2 Query: 23 GGVNIKIHKDLL--KNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTLS 652 GG ++ +LL K+ P IVVGTPGR+ AL RDK LSL+N++ F+LDECDKML+ +DMRRDVQEIF+ TP DKQVMMFSATLS+E+RP+CKKFM++P+E+YVDD+ KLTLHGL+Q+YIKL E EKNRKLN+LLD+L+FNQV+IFVKS RA+EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE NKRI VATD+ GRGIDIER+ L+ Sbjct: 164 GGTPMQKDIELLSSKDTYPSIVVGTPGRLNALVRDKKLSLRNIKAFVLDECDKMLDQIDMRRDVQEIFRATPADKQVMMFSATLSQEVRPICKKFMRNPLEVYVDDDTKLTLHGLLQYYIKLGESEKNRKLNELLDSLEFNQVIIFVKSTQRASELDKLLRECNFPSIAVHSGVSQEERIKRYKEFKEFNKRICVATDVFGRGIDIERINLA 375 HSP 2 Score: 32.3426 bits (72), Expect = 1.226e-85 Identity = 12/19 (63.16%), Postives = 16/19 (84.21%), Query Frame = 1 Query: 643 HIVINYDMPDSADTYLHRV 699 ++ INYD+P AD+YLHRV Sbjct: 373 NLAINYDLPADADSYLHRV 391
BLAST of CX301777 vs. ExPASy Swiss-Prot
Match: SUB2_ASPTN (ATP-dependent RNA helicase sub2 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=sub2 PE=3 SV=1) HSP 1 Score: 303.908 bits (777), Expect = 1.599e-85 Identity = 151/212 (71.23%), Postives = 180/212 (84.91%), Query Frame = 2 Query: 23 GGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTLS 652 GG I+ ++L N+ P IVVGTPGR+ AL R+K LSL+NV+ F+LDECDKML+ +DMRRDVQEIF+ TP DKQVMMFSATLS+EIRP+CKKFM++P+E+YVDD+ KLTLHGL Q+YIKLSE EKNRKLNDLLD L+FNQV+IFVKS RA EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE NKRI VATD+ GRGIDIER+ L+ Sbjct: 160 GGTPIQKDIEVLSNKESYPNIVVGTPGRLNALVREKKLSLRNVKAFVLDECDKMLDQIDMRRDVQEIFRATPADKQVMMFSATLSQEIRPICKKFMRNPLEVYVDDDTKLTLHGLQQYYIKLSESEKNRKLNDLLDNLEFNQVIIFVKSTQRANELDKLLRECNFPSIAVHSGVSQEERIKRYKEFKEFNKRICVATDVFGRGIDIERINLA 371 HSP 2 Score: 32.3426 bits (72), Expect = 1.599e-85 Identity = 12/19 (63.16%), Postives = 16/19 (84.21%), Query Frame = 1 Query: 643 HIVINYDMPDSADTYLHRV 699 ++ INYD+P AD+YLHRV Sbjct: 369 NLAINYDLPADADSYLHRV 387
BLAST of CX301777 vs. ExPASy Swiss-Prot
Match: SUB2_PICST (ATP-dependent RNA helicase SUB2 OS=Pichia stipitis GN=SUB2 PE=3 SV=1) HSP 1 Score: 302.753 bits (774), Expect = 2.721e-85 Identity = 149/212 (70.28%), Postives = 176/212 (83.02%), Query Frame = 2 Query: 23 GGVNIK--IHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTLS 652 GG IK I K K+ CP IVV TPGR+ AL +K + L NV+ F++DECDK+LES+DMRRDVQ+IF+ TPH KQVMMFSATLS+EIRPVCKKFMQ+P+EIYVDDEAKLTLHGL Q+YIKL E EKNRKL+DLLD+L+FNQV+IFVKS RA ELNKLL CNFPSI +HSG+ QEER+ RY+ FKE NKRI V+TD+ GRGIDIER+ L+ Sbjct: 154 GGTPIKRDIEKLKSKDTCPHIVVATPGRLHALVNEKAIRLSNVKSFVIDECDKVLESIDMRRDVQDIFRATPHQKQVMMFSATLSQEIRPVCKKFMQNPLEIYVDDEAKLTLHGLQQYYIKLEEKEKNRKLSDLLDSLEFNQVIIFVKSTQRANELNKLLCSCNFPSIAVHSGLPQEERIERYRSFKEFNKRICVSTDVFGRGIDIERINLA 365 HSP 2 Score: 32.7278 bits (73), Expect = 2.721e-85 Identity = 12/19 (63.16%), Postives = 16/19 (84.21%), Query Frame = 1 Query: 643 HIVINYDMPDSADTYLHRV 699 ++ INYD+P+ AD YLHRV Sbjct: 363 NLAINYDLPNEADQYLHRV 381
BLAST of CX301777 vs. ExPASy Swiss-Prot
Match: SUB2_NEOFI (ATP-dependent RNA helicase sub2 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=sub2 PE=3 SV=1) HSP 1 Score: 302.753 bits (774), Expect = 3.549e-85 Identity = 150/212 (70.75%), Postives = 181/212 (85.38%), Query Frame = 2 Query: 23 GGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTLS 652 GG I+ ++L N+ P IVVGTPGR+ AL R+K LSL+NV+ F+LDECDKML+ +DMRRDVQEIF+ TP DKQVMMFSATLS+EIRP+CKKFM++P+E+YVDD+ KLTLHGL Q+YIKLSE EKNRKLN+LLD+L+FNQV+IFVKS RA EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE NKRI VATD+ GRGIDIER+ L+ Sbjct: 163 GGTPIQKDIEVLSNKESYPNIVVGTPGRLNALVREKKLSLRNVKAFVLDECDKMLDQIDMRRDVQEIFRATPADKQVMMFSATLSQEIRPICKKFMRNPLEVYVDDDTKLTLHGLQQYYIKLSESEKNRKLNELLDSLEFNQVIIFVKSTLRANELDKLLRECNFPSIAVHSGVSQEERIKRYKEFKEFNKRICVATDVFGRGIDIERINLA 374 HSP 2 Score: 32.3426 bits (72), Expect = 3.549e-85 Identity = 12/19 (63.16%), Postives = 16/19 (84.21%), Query Frame = 1 Query: 643 HIVINYDMPDSADTYLHRV 699 ++ INYD+P AD+YLHRV Sbjct: 372 NLAINYDLPADADSYLHRV 390
BLAST of CX301777 vs. ExPASy Swiss-Prot
Match: SUB2_CRYNE (ATP-dependent RNA helicase SUB2 OS=Cryptococcus neoformans GN=SUB2 PE=3 SV=1) HSP 1 Score: 300.442 bits (768), Expect = 6.038e-85 Identity = 148/211 (70.14%), Postives = 171/211 (81.04%), Query Frame = 2 Query: 23 GGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTL 649 GG I +++L N+ CP IVVGTPGR +AL RDK L+ V+HF+LDECDKMLE LDMRRDVQEIF+ TPH KQVMMFSATLSK+IR CKKFMQ P+EIYVDDE KLTLHGL Q Y+KL E EKNRKLNDLLD L+FNQV IFVKSV RA +L+ LL ECNFPSICIHSG+ Q ER++R++ FK KRILVATD+ GRGID+ERV + Sbjct: 164 GGTPISADQEILANKEKCPHIVVGTPGRTMALVRDKKLNASKVKHFVLDECDKMLEQLDMRRDVQEIFRATPHHKQVMMFSATLSKDIRATCKKFMQSPLEIYVDDETKLTLHGLQQFYLKLEEREKNRKLNDLLDNLEFNQVCIFVKSVQRATQLDALLQECNFPSICIHSGLQQAERISRFQQFKAFEKRILVATDIFGRGIDVERVNV 374 HSP 2 Score: 33.8834 bits (76), Expect = 6.038e-85 Identity = 13/19 (68.42%), Postives = 16/19 (84.21%), Query Frame = 1 Query: 643 HIVINYDMPDSADTYLHRV 699 ++VINYD P AD+YLHRV Sbjct: 373 NVVINYDAPSDADSYLHRV 391
BLAST of CX301777 vs. ExPASy Swiss-Prot
Match: SUB2_COCIM (ATP-dependent RNA helicase SUB2 OS=Coccidioides immitis GN=SUB2 PE=3 SV=1) HSP 1 Score: 300.056 bits (767), Expect = 1.027e-84 Identity = 145/198 (73.23%), Postives = 173/198 (87.37%), Query Frame = 2 Query: 59 KNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTLS 652 K+ P IVVGTPGR+ AL R+K LSL+N++ F+LDECDKML+ +DMRRDVQEIF+ TP DKQVMMFSATLS+EIRP+CKKFM++P+E+YVDD+ KLTLHGL Q+YIKLSE EKNRKLN+LLD L+FNQV+IFVKS RA EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE NKRI VATD+ GRGIDIER+ L+ Sbjct: 179 KDTYPNIVVGTPGRLNALVREKKLSLRNIKAFVLDECDKMLDQIDMRRDVQEIFRSTPADKQVMMFSATLSQEIRPICKKFMRNPLEVYVDDDTKLTLHGLQQYYIKLSEAEKNRKLNELLDNLEFNQVIIFVKSTLRANELDKLLRECNFPSIAVHSGVSQEERIKRYKEFKEFNKRICVATDVFGRGIDIERINLA 376 HSP 2 Score: 33.4982 bits (75), Expect = 1.027e-84 Identity = 13/19 (68.42%), Postives = 16/19 (84.21%), Query Frame = 1 Query: 643 HIVINYDMPDSADTYLHRV 699 ++ INYDMP AD+YLHRV Sbjct: 374 NLAINYDMPADADSYLHRV 392
BLAST of CX301777 vs. ExPASy Swiss-Prot
Match: SUB2_PICGU (ATP-dependent RNA helicase SUB2 OS=Pichia guilliermondii GN=SUB2 PE=3 SV=3) HSP 1 Score: 298.901 bits (764), Expect = 3.880e-84 Identity = 148/212 (69.81%), Postives = 176/212 (83.02%), Query Frame = 2 Query: 23 GGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTLS 652 GG+ I + LKN+ CP IVV TPGR+ AL +K + L NV+ F++DECDK+LE++DMRRDVQ+IF+ TPH KQVMMFSATLS+EIRPVCKKFMQ+P+EIYVDDEAKLTLHGL Q+Y+KL E EKNRKL DLLD+L+FNQV+IFVKS SRA ELNKLLV NFPSI +HS M QEER+ RYK FKE NKRI V+TD+ GRGIDIER+ L+ Sbjct: 153 GGIPIAKDIEKLKNKDTCPHIVVATPGRLHALVEEKAIRLNNVKSFVIDECDKVLEAIDMRRDVQDIFRNTPHQKQVMMFSATLSQEIRPVCKKFMQNPLEIYVDDEAKLTLHGLQQYYLKLDEKEKNRKLADLLDSLEFNQVIIFVKSTSRANELNKLLVASNFPSIAVHSAMPQEERIARYKSFKEFNKRICVSTDVFGRGIDIERINLA 364 HSP 2 Score: 32.7278 bits (73), Expect = 3.880e-84 Identity = 12/19 (63.16%), Postives = 16/19 (84.21%), Query Frame = 1 Query: 643 HIVINYDMPDSADTYLHRV 699 ++ INYD+P+ AD YLHRV Sbjct: 362 NLAINYDLPNEADQYLHRV 380 The following BLAST results are available for this feature:
BLAST of CX301777 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX301777 ID=CX301777; Name=CX301777; organism=Citrus sinensis; type=EST; length=699bpback to top |