CX301777
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX301777 vs. ExPASy Swiss-Prot
Match: IF4A_DROME (Eukaryotic initiation factor 4A OS=Drosophila melanogaster GN=eIF-4a PE=2 SV=3) HSP 1 Score: 137.502 bits (345), Expect = 5.891e-35 Identity = 79/212 (37.26%), Postives = 126/212 (59.43%), Query Frame = 2
Query: 23 GGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLN---DLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTL 649
GG N++ +L++ C +VVGTPGR+ + K L + ++ F+LDE D+ML S + +Q++FKM P D QV++ SAT+ ++ V + FM+DP+ I V E +LTL G+ Q Y+ + + +N KL DL D L Q VIF + + +L + + NF +H M Q +R K F+ G+ R+L+ TDL+ RGID+++V+L
Sbjct: 134 GGTNVREDARILESGC-HVVVGTPGRVYDMINRKVLRTQYIKLFVLDEADEML-SRGFKDQIQDVFKMLPPDVQVILLSATMPPDVLEVSRCFMRDPVSILVKKE-ELTLEGIKQFYVNVKQ--ENWKLGTLCDLYDTLSITQSVIFCNTRRKVDQLTQEMSIHNFTVSAMHGDMEQRDREVIMKQFRSGSSRVLITTDLLARGIDVQQVSL 340 HSP 2 Score: 29.6462 bits (65), Expect = 5.891e-35 Identity = 9/18 (50.00%), Postives = 15/18 (83.33%), Query Frame = 1
Query: 646 IVINYDMPDSADTYLHRV 699
+VINYD+P + + Y+HR+
Sbjct: 340 LVINYDLPSNRENYIHRI 357
BLAST of CX301777 vs. ExPASy Swiss-Prot
Match: IF4A1_PONAB (Eukaryotic initiation factor 4A-I OS=Pongo abelii GN=EIF4A1 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.673e-35 Identity = 78/210 (37.14%), Postives = 123/210 (58.57%), Query Frame = 2
Query: 23 GGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTL 649
GG N++ L+ E P I+VGTPGR+ + + LS K ++ F+LDE D+ML S + + +IF+ + QV++ SAT+ ++ V KKFM+DP+ I V E +LTL G+ Q YI + E K L DL + L Q VIF+ + + L + + +F +H M Q+ER + F+ G+ R+L+ TDL+ RGID+++V+L
Sbjct: 136 GGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEML-SRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKE-ELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSL 343 HSP 2 Score: 29.261 bits (64), Expect = 7.673e-35 Identity = 9/18 (50.00%), Postives = 15/18 (83.33%), Query Frame = 1
Query: 646 IVINYDMPDSADTYLHRV 699
+VINYD+P + + Y+HR+
Sbjct: 343 LVINYDLPTNRENYIHRI 360
BLAST of CX301777 vs. ExPASy Swiss-Prot
Match: IF4A1_PANTR (Eukaryotic initiation factor 4A-I OS=Pan troglodytes GN=EIF4A1 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.673e-35 Identity = 78/210 (37.14%), Postives = 123/210 (58.57%), Query Frame = 2
Query: 23 GGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTL 649
GG N++ L+ E P I+VGTPGR+ + + LS K ++ F+LDE D+ML S + + +IF+ + QV++ SAT+ ++ V KKFM+DP+ I V E +LTL G+ Q YI + E K L DL + L Q VIF+ + + L + + +F +H M Q+ER + F+ G+ R+L+ TDL+ RGID+++V+L
Sbjct: 136 GGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEML-SRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKE-ELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSL 343 HSP 2 Score: 29.261 bits (64), Expect = 7.673e-35 Identity = 9/18 (50.00%), Postives = 15/18 (83.33%), Query Frame = 1
Query: 646 IVINYDMPDSADTYLHRV 699
+VINYD+P + + Y+HR+
Sbjct: 343 LVINYDLPTNRENYIHRI 360
BLAST of CX301777 vs. ExPASy Swiss-Prot
Match: IF4A1_MOUSE (Eukaryotic initiation factor 4A-I OS=Mus musculus GN=Eif4a1 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.673e-35 Identity = 78/210 (37.14%), Postives = 123/210 (58.57%), Query Frame = 2
Query: 23 GGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTL 649
GG N++ L+ E P I+VGTPGR+ + + LS K ++ F+LDE D+ML S + + +IF+ + QV++ SAT+ ++ V KKFM+DP+ I V E +LTL G+ Q YI + E K L DL + L Q VIF+ + + L + + +F +H M Q+ER + F+ G+ R+L+ TDL+ RGID+++V+L
Sbjct: 136 GGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEML-SRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKE-ELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSL 343 HSP 2 Score: 29.261 bits (64), Expect = 7.673e-35 Identity = 9/18 (50.00%), Postives = 15/18 (83.33%), Query Frame = 1
Query: 646 IVINYDMPDSADTYLHRV 699
+VINYD+P + + Y+HR+
Sbjct: 343 LVINYDLPTNRENYIHRI 360
BLAST of CX301777 vs. ExPASy Swiss-Prot
Match: IF4A1_HUMAN (Eukaryotic initiation factor 4A-I OS=Homo sapiens GN=EIF4A1 PE=1 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.673e-35 Identity = 78/210 (37.14%), Postives = 123/210 (58.57%), Query Frame = 2
Query: 23 GGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTL 649
GG N++ L+ E P I+VGTPGR+ + + LS K ++ F+LDE D+ML S + + +IF+ + QV++ SAT+ ++ V KKFM+DP+ I V E +LTL G+ Q YI + E K L DL + L Q VIF+ + + L + + +F +H M Q+ER + F+ G+ R+L+ TDL+ RGID+++V+L
Sbjct: 136 GGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEML-SRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKE-ELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSL 343 HSP 2 Score: 29.261 bits (64), Expect = 7.673e-35 Identity = 9/18 (50.00%), Postives = 15/18 (83.33%), Query Frame = 1
Query: 646 IVINYDMPDSADTYLHRV 699
+VINYD+P + + Y+HR+
Sbjct: 343 LVINYDLPTNRENYIHRI 360
BLAST of CX301777 vs. ExPASy Swiss-Prot
Match: IF4A1_BOVIN (Eukaryotic initiation factor 4A-I OS=Bos taurus GN=EIF4A1 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.673e-35 Identity = 78/210 (37.14%), Postives = 123/210 (58.57%), Query Frame = 2
Query: 23 GGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTL 649
GG N++ L+ E P I+VGTPGR+ + + LS K ++ F+LDE D+ML S + + +IF+ + QV++ SAT+ ++ V KKFM+DP+ I V E +LTL G+ Q YI + E K L DL + L Q VIF+ + + L + + +F +H M Q+ER + F+ G+ R+L+ TDL+ RGID+++V+L
Sbjct: 136 GGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEML-SRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKE-ELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSL 343 HSP 2 Score: 29.261 bits (64), Expect = 7.673e-35 Identity = 9/18 (50.00%), Postives = 15/18 (83.33%), Query Frame = 1
Query: 646 IVINYDMPDSADTYLHRV 699
+VINYD+P + + Y+HR+
Sbjct: 343 LVINYDLPTNRENYIHRI 360
BLAST of CX301777 vs. ExPASy Swiss-Prot
Match: IF4A_CRYNE (ATP-dependent RNA helicase eIF4A OS=Cryptococcus neoformans GN=TIF1 PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 7.674e-35 Identity = 80/205 (39.02%), Postives = 121/205 (59.02%), Query Frame = 2
Query: 41 IHKDLLK-NECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTL 649
+ +D+ + NE P IVVGTPGR+ + L + V F LDE D+ML S + + EIF++ P + QV++ SAT++ E+ V KKFM+DP+ I V + +LTL G+ Q YI + + E K L DL + + Q VIF + + L + L + F +H M QEER K F+ G+ R+L+ TDL+ RGID+++V+L
Sbjct: 136 VREDIARLNEGPHIVVGTPGRVFDMINRGALKTEAVMMFCLDEADEML-STGFKESIYEIFQLLPGETQVVLLSATMAPEVLDVTKKFMRDPIRILVKKD-ELTLEGIRQFYINVEKEEWKLETLCDLYETVTITQAVIFCSTRRKVDWLTQQLHDRQFTVSAMHGDMKQEEREVIMKEFRSGSSRVLITTDLLARGIDVQQVSL 338 HSP 2 Score: 30.8018 bits (68), Expect = 7.674e-35 Identity = 10/18 (55.56%), Postives = 15/18 (83.33%), Query Frame = 1
Query: 646 IVINYDMPDSADTYLHRV 699
+VINYD+P S + Y+HR+
Sbjct: 338 LVINYDLPSSKENYIHRI 355
BLAST of CX301777 vs. ExPASy Swiss-Prot
Match: IF4A1_RABIT (Eukaryotic initiation factor 4A-I (Fragment) OS=Oryctolagus cuniculus GN=EIF4A1 PE=1 SV=2) HSP 1 Score: 137.502 bits (345), Expect = 7.675e-35 Identity = 78/210 (37.14%), Postives = 123/210 (58.57%), Query Frame = 2
Query: 23 GGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTL 649
GG N++ L+ E P I+VGTPGR+ + + LS K ++ F+LDE D+ML S + + +IF+ + QV++ SAT+ ++ V KKFM+DP+ I V E +LTL G+ Q YI + E K L DL + L Q VIF+ + + L + + +F +H M Q+ER + F+ G+ R+L+ TDL+ RGID+++V+L
Sbjct: 128 GGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEML-SRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKE-ELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSL 335 HSP 2 Score: 29.261 bits (64), Expect = 7.675e-35 Identity = 9/18 (50.00%), Postives = 15/18 (83.33%), Query Frame = 1
Query: 646 IVINYDMPDSADTYLHRV 699
+VINYD+P + + Y+HR+
Sbjct: 335 LVINYDLPTNRENYIHRI 352
BLAST of CX301777 vs. ExPASy Swiss-Prot
Match: IF4A_VANPO (ATP-dependent RNA helicase eIF4A OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=TIF1 PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.302e-34 Identity = 80/193 (41.45%), Postives = 117/193 (60.62%), Query Frame = 2
Query: 74 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTL 649
QIVVGTPGR+ + N++ FILDE D+ML S R + +IF M P QV++ SATL ++ V KFM++P+ I V + +LTL G+ Q YI + E + K L+DL D++ Q VIF + + EL + L E NF I+S + Q+ER K F+ G+ RIL++TDL+ RGID+++V+L
Sbjct: 142 QIVVGTPGRVSDNIQRHRFKTDNIKMFILDEADEMLSS-GFREQIYQIFTMLPPTTQVVLLSATLPGDVLEVTTKFMRNPIRILVKKD-ELTLEGIKQFYINVEEEQYKFDCLSDLYDSISVTQAVIFCNTRRKVEELTQKLTESNFTVSSIYSDLPQQERDVIMKEFRSGSSRILISTDLLARGIDVQQVSL 332 HSP 2 Score: 29.261 bits (64), Expect = 1.302e-34 Identity = 9/18 (50.00%), Postives = 15/18 (83.33%), Query Frame = 1
Query: 646 IVINYDMPDSADTYLHRV 699
+VINYD+P + + Y+HR+
Sbjct: 332 LVINYDLPTNKENYIHRI 349
BLAST of CX301777 vs. ExPASy Swiss-Prot
Match: FAL1_VANPO (ATP-dependent RNA helicase FAL1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=FAL1 PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.696e-34 Identity = 78/199 (39.20%), Postives = 125/199 (62.81%), Query Frame = 2
Query: 59 KNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML-ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTL 649
KN C Q+V GTPGR+L + + L+ +NV+ ILDE D++L ESL ++ + +IF P QV++ SAT+SK+I V KKFM DP++I V + +++L G+ Q+Y+ + + + K L DL D+L Q VIF + + L+ L + NF + +H M QE+R F+ G+ R+L++TD+ RGID+++V+L
Sbjct: 140 KNGC-QVVSGTPGRVLDMFKRHLLNTRNVQMLILDEADELLGESLGFKQQIYDIFTKLPAACQVVVVSATMSKDILEVTKKFMSDPVKILVKRD-EISLEGIKQYYVNVEKEDWKFDTLCDLYDSLTITQCVIFCNTKKKVDWLSAKLTQSNFAVVSMHGDMKQEDRNKVMSDFRSGHSRVLISTDVWARGIDVQQVSL 336 HSP 2 Score: 28.8758 bits (63), Expect = 1.696e-34 Identity = 9/18 (50.00%), Postives = 15/18 (83.33%), Query Frame = 1
Query: 646 IVINYDMPDSADTYLHRV 699
+VINYD+P+ + Y+HR+
Sbjct: 336 LVINYDIPEIMENYIHRI 353 The following BLAST results are available for this feature:
BLAST of CX301777 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX301777 ID=CX301777; Name=CX301777; organism=Citrus sinensis; type=EST; length=699bpback to top |