CX301777
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX301777 vs. ExPASy Swiss-Prot
Match: IF4A2_RAT (Eukaryotic initiation factor 4A-II OS=Rattus norvegicus GN=Eif4a2 PE=1 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.208e-34 Identity = 80/210 (38.10%), Postives = 122/210 (58.10%), Query Frame = 2
Query: 23 GGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTL 649
GG N++ L+ E P IVVGTPGR+ + + LS K ++ F+LDE D+ML S + + EIF+ QV++ SAT+ ++ V KKFM+DP+ I V E +LTL G+ Q YI + E K L DL + L Q VIF+ + + L + + +F +H M Q+ER + F+ G+ R+L+ TDL+ RGID+++V+L
Sbjct: 137 GGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEML-SRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKE-ELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSL 344 HSP 2 Score: 29.261 bits (64), Expect = 2.208e-34 Identity = 9/18 (50.00%), Postives = 15/18 (83.33%), Query Frame = 1
Query: 646 IVINYDMPDSADTYLHRV 699
+VINYD+P + + Y+HR+
Sbjct: 344 LVINYDLPTNRENYIHRI 361
BLAST of CX301777 vs. ExPASy Swiss-Prot
Match: IF4A2_PONAB (Eukaryotic initiation factor 4A-II OS=Pongo abelii GN=EIF4A2 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.208e-34 Identity = 80/210 (38.10%), Postives = 122/210 (58.10%), Query Frame = 2
Query: 23 GGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTL 649
GG N++ L+ E P IVVGTPGR+ + + LS K ++ F+LDE D+ML S + + EIF+ QV++ SAT+ ++ V KKFM+DP+ I V E +LTL G+ Q YI + E K L DL + L Q VIF+ + + L + + +F +H M Q+ER + F+ G+ R+L+ TDL+ RGID+++V+L
Sbjct: 137 GGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEML-SRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKE-ELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSL 344 HSP 2 Score: 29.261 bits (64), Expect = 2.208e-34 Identity = 9/18 (50.00%), Postives = 15/18 (83.33%), Query Frame = 1
Query: 646 IVINYDMPDSADTYLHRV 699
+VINYD+P + + Y+HR+
Sbjct: 344 LVINYDLPTNRENYIHRI 361
BLAST of CX301777 vs. ExPASy Swiss-Prot
Match: IF4A2_MOUSE (Eukaryotic initiation factor 4A-II OS=Mus musculus GN=Eif4a2 PE=2 SV=2) HSP 1 Score: 135.961 bits (341), Expect = 2.208e-34 Identity = 80/210 (38.10%), Postives = 122/210 (58.10%), Query Frame = 2
Query: 23 GGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTL 649
GG N++ L+ E P IVVGTPGR+ + + LS K ++ F+LDE D+ML S + + EIF+ QV++ SAT+ ++ V KKFM+DP+ I V E +LTL G+ Q YI + E K L DL + L Q VIF+ + + L + + +F +H M Q+ER + F+ G+ R+L+ TDL+ RGID+++V+L
Sbjct: 137 GGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEML-SRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKE-ELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSL 344 HSP 2 Score: 29.261 bits (64), Expect = 2.208e-34 Identity = 9/18 (50.00%), Postives = 15/18 (83.33%), Query Frame = 1
Query: 646 IVINYDMPDSADTYLHRV 699
+VINYD+P + + Y+HR+
Sbjct: 344 LVINYDLPTNRENYIHRI 361
BLAST of CX301777 vs. ExPASy Swiss-Prot
Match: IF4A2_HUMAN (Eukaryotic initiation factor 4A-II OS=Homo sapiens GN=EIF4A2 PE=1 SV=2) HSP 1 Score: 135.961 bits (341), Expect = 2.208e-34 Identity = 80/210 (38.10%), Postives = 122/210 (58.10%), Query Frame = 2
Query: 23 GGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTL 649
GG N++ L+ E P IVVGTPGR+ + + LS K ++ F+LDE D+ML S + + EIF+ QV++ SAT+ ++ V KKFM+DP+ I V E +LTL G+ Q YI + E K L DL + L Q VIF+ + + L + + +F +H M Q+ER + F+ G+ R+L+ TDL+ RGID+++V+L
Sbjct: 137 GGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEML-SRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKE-ELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSL 344 HSP 2 Score: 29.261 bits (64), Expect = 2.208e-34 Identity = 9/18 (50.00%), Postives = 15/18 (83.33%), Query Frame = 1
Query: 646 IVINYDMPDSADTYLHRV 699
+VINYD+P + + Y+HR+
Sbjct: 344 LVINYDLPTNRENYIHRI 361
BLAST of CX301777 vs. ExPASy Swiss-Prot
Match: IF4A2_BOVIN (Eukaryotic initiation factor 4A-II OS=Bos taurus GN=EIF4A2 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.208e-34 Identity = 80/210 (38.10%), Postives = 122/210 (58.10%), Query Frame = 2
Query: 23 GGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTL 649
GG N++ L+ E P IVVGTPGR+ + + LS K ++ F+LDE D+ML S + + EIF+ QV++ SAT+ ++ V KKFM+DP+ I V E +LTL G+ Q YI + E K L DL + L Q VIF+ + + L + + +F +H M Q+ER + F+ G+ R+L+ TDL+ RGID+++V+L
Sbjct: 137 GGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEML-SRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKE-ELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSL 344 HSP 2 Score: 29.261 bits (64), Expect = 2.208e-34 Identity = 9/18 (50.00%), Postives = 15/18 (83.33%), Query Frame = 1
Query: 646 IVINYDMPDSADTYLHRV 699
+VINYD+P + + Y+HR+
Sbjct: 344 LVINYDLPTNRENYIHRI 361
BLAST of CX301777 vs. ExPASy Swiss-Prot
Match: IF4A2_CHICK (Eukaryotic initiation factor 4A-II OS=Gallus gallus GN=EIF4A2 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.746e-34 Identity = 79/210 (37.62%), Postives = 123/210 (58.57%), Query Frame = 2
Query: 23 GGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTL 649
GG N++ L+ E P IVVGTPGR+ + + LS K ++ F+LDE D+ML S + + EIF+ + QV++ SAT+ ++ V KKFM++P+ I V E +LTL G+ Q YI + E K L DL + L Q VIF+ + + L + + +F +H M Q+ER + F+ G+ R+L+ TDL+ RGID+++V+L
Sbjct: 137 GGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEML-SRGFKDQIYEIFQKLSTNIQVVLLSATMPMDVLEVTKKFMREPIRILVKKE-ELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSL 344 HSP 2 Score: 29.261 bits (64), Expect = 3.746e-34 Identity = 9/18 (50.00%), Postives = 15/18 (83.33%), Query Frame = 1
Query: 646 IVINYDMPDSADTYLHRV 699
+VINYD+P + + Y+HR+
Sbjct: 344 LVINYDLPTNRENYIHRI 361
BLAST of CX301777 vs. ExPASy Swiss-Prot
Match: IF4A2_MACFA (Eukaryotic initiation factor 4A-II OS=Macaca fascicularis GN=EIF4A2 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.879e-34 Identity = 80/210 (38.10%), Postives = 121/210 (57.62%), Query Frame = 2
Query: 23 GGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTL 649
GG N++ L+ E P IVVGTPGR+ + + LS K ++ F+LDE D ML S + + EIF+ QV++ SAT+ ++ V KKFM+DP+ I V E +LTL G+ Q YI + E K L DL + L Q VIF+ + + L + + +F +H M Q+ER + F+ G+ R+L+ TDL+ RGID+++V+L
Sbjct: 138 GGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADGML-SRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKE-ELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSL 345 HSP 2 Score: 29.261 bits (64), Expect = 4.879e-34 Identity = 9/18 (50.00%), Postives = 15/18 (83.33%), Query Frame = 1
Query: 646 IVINYDMPDSADTYLHRV 699
+VINYD+P + + Y+HR+
Sbjct: 345 LVINYDLPTNRENYIHRI 362
BLAST of CX301777 vs. ExPASy Swiss-Prot
Match: IF4A_ASPFU (ATP-dependent RNA helicase eIF4A OS=Aspergillus fumigatus GN=tif1 PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 6.355e-34 Identity = 79/210 (37.62%), Postives = 124/210 (59.05%), Query Frame = 2
Query: 23 GGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTL 649
GG N++ L+ E PQ+VVGTPGR+ + + + L N++ FILDE D+ML S + +IF++ P QV++ SAT+ +++ V KFM+DP+ I V + +LTL G+ Q YI + + E K L+DL + + Q VIF + + L L +F +H M Q +R K F+ G+ R+L+ATDL+ RGID+++V+L
Sbjct: 129 GGTNVREDMKALQ-EGPQVVVGTPGRVQDMIQRRVLRTDNLKMFILDEADEML-SRGFTEQIYDIFQLLPQSTQVVLLSATMPQDVLEVTTKFMRDPVRILVKKQ-ELTLEGIKQFYIAVEKEEWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMEQAQRDVIMKEFRSGSSRVLIATDLLARGIDVQQVSL 335 HSP 2 Score: 28.8758 bits (63), Expect = 6.355e-34 Identity = 9/18 (50.00%), Postives = 15/18 (83.33%), Query Frame = 1
Query: 646 IVINYDMPDSADTYLHRV 699
+VINYD+P + + Y+HR+
Sbjct: 335 LVINYDLPANRENYIHRI 352
BLAST of CX301777 vs. ExPASy Swiss-Prot
Match: IF4A_NEOFI (ATP-dependent RNA helicase eIF4A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=tif1 PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 6.357e-34 Identity = 79/210 (37.62%), Postives = 124/210 (59.05%), Query Frame = 2
Query: 23 GGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTL 649
GG N++ L+ E PQ+VVGTPGR+ + + + L N++ FILDE D+ML S + +IF++ P QV++ SAT+ +++ V KFM+DP+ I V + +LTL G+ Q YI + + E K L+DL + + Q VIF + + L L +F +H M Q +R K F+ G+ R+L+ATDL+ RGID+++V+L
Sbjct: 129 GGTNVREDMKALQ-EGPQVVVGTPGRVQDMIQRRVLRTDNLKMFILDEADEML-SRGFTEQIYDIFQLLPQSTQVVLLSATMPQDVLEVTTKFMRDPVRILVKKQ-ELTLEGIKQFYIAVEKEEWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMEQAQRDVIMKEFRSGSSRVLIATDLLARGIDVQQVSL 335 HSP 2 Score: 28.8758 bits (63), Expect = 6.357e-34 Identity = 9/18 (50.00%), Postives = 15/18 (83.33%), Query Frame = 1
Query: 646 IVINYDMPDSADTYLHRV 699
+VINYD+P + + Y+HR+
Sbjct: 335 LVINYDLPANRENYIHRI 352
BLAST of CX301777 vs. ExPASy Swiss-Prot
Match: FAL1_YEAST (ATP-dependent RNA helicase FAL1 OS=Saccharomyces cerevisiae GN=FAL1 PE=1 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 8.280e-34 Identity = 77/212 (36.32%), Postives = 132/212 (62.26%), Query Frame = 2
Query: 23 GGVNIKIH-KDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML-ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTL 649
GG +K K + K+ C Q V GTPGR+L + + + L +NV+ +LDE D++L E+L ++ + +IF P + QV++ SAT++K+I V +KFM DP++I V + +++L G+ Q+ + + + E K L D+ D+L Q VIF + + L++ L++ NF + +H M QEER F+ G+ R+L++TD+ RGID+++V+L
Sbjct: 127 GGKTLKDDLKKMQKHGC-QAVSGTPGRVLDMIKKQMLQTRNVQMLVLDEADELLSETLGFKQQIYDIFAKLPKNCQVVVVSATMNKDILEVTRKFMNDPVKILVKRD-EISLEGIKQYVVNVDKEEWKFDTLCDIYDSLTITQCVIFCNTKKKVDWLSQRLIQSNFAVVSMHGDMKQEERDKVMNDFRTGHSRVLISTDVWARGIDVQQVSL 336 HSP 2 Score: 29.261 bits (64), Expect = 8.280e-34 Identity = 9/18 (50.00%), Postives = 15/18 (83.33%), Query Frame = 1
Query: 646 IVINYDMPDSADTYLHRV 699
+VINYD+P+ + Y+HR+
Sbjct: 336 LVINYDLPEIIENYIHRI 353 The following BLAST results are available for this feature:
BLAST of CX301777 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX301777 ID=CX301777; Name=CX301777; organism=Citrus sinensis; type=EST; length=699bpback to top |