CX301777
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX301777 vs. ExPASy Swiss-Prot
Match: FAL1_YEAS7 (ATP-dependent RNA helicase FAL1 OS=Saccharomyces cerevisiae (strain YJM789) GN=FAL1 PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 8.280e-34 Identity = 77/212 (36.32%), Postives = 132/212 (62.26%), Query Frame = 2 Query: 23 GGVNIKIH-KDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML-ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTL 649 GG +K K + K+ C Q V GTPGR+L + + + L +NV+ +LDE D++L E+L ++ + +IF P + QV++ SAT++K+I V +KFM DP++I V + +++L G+ Q+ + + + E K L D+ D+L Q VIF + + L++ L++ NF + +H M QEER F+ G+ R+L++TD+ RGID+++V+L Sbjct: 127 GGKTLKDDLKKMQKHGC-QAVSGTPGRVLDMIKKQMLQTRNVQMLVLDEADELLSETLGFKQQIYDIFAKLPKNCQVVVVSATMNKDILEVTRKFMNDPVKILVKRD-EISLEGIKQYVVNVDKEEWKFDTLCDIYDSLTITQCVIFCNTKKKVDWLSQRLIQSNFAVVSMHGDMKQEERDKVMNDFRTGHSRVLISTDVWARGIDVQQVSL 336 HSP 2 Score: 29.261 bits (64), Expect = 8.280e-34 Identity = 9/18 (50.00%), Postives = 15/18 (83.33%), Query Frame = 1 Query: 646 IVINYDMPDSADTYLHRV 699 +VINYD+P+ + Y+HR+ Sbjct: 336 LVINYDLPEIIENYIHRI 353
BLAST of CX301777 vs. ExPASy Swiss-Prot
Match: DHH1_VANPO (ATP-dependent RNA helicase DHH1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=DHH1 PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.076e-33 Identity = 81/217 (37.33%), Postives = 118/217 (54.38%), Query Frame = 2 Query: 2 SCRIRHEGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTL 649 SC + GG N++ D+L+ NE I+VGTPGR+L LA K L FI+DE DKML S D + +++I P + Q ++FSAT ++ + P EI + DE LTL G+ Q+Y + E +K LN L L NQ +IF S +R L K + + + H+ M Q+ER + F++G R LV +DL+ RGIDI+ V + Sbjct: 132 SCMVT-TGGTNLR--DDILRLNETVHILVGTPGRVLDLASRKVADLSECNLFIMDEADKML-SRDFKSIIEQILVFLPKNHQSLLFSATFPLSVKEFMVNHLHKPYEINLMDE--LTLKGITQYYAFVEEKQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQQERNRVFHEFRQGKVRTLVCSDLLTRGIDIQAVNV 342 HSP 2 Score: 33.4982 bits (75), Expect = 1.076e-33 Identity = 12/21 (57.14%), Postives = 18/21 (85.71%), Query Frame = 1 Query: 637 ACHIVINYDMPDSADTYLHRV 699 A ++VIN+D P +A+TYLHR+ Sbjct: 339 AVNVVINFDFPKTAETYLHRI 359
BLAST of CX301777 vs. ExPASy Swiss-Prot
Match: DHH1_ASHGO (ATP-dependent RNA helicase DHH1 OS=Ashbya gossypii GN=DHH1 PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.076e-33 Identity = 80/217 (36.87%), Postives = 119/217 (54.84%), Query Frame = 2 Query: 2 SCRIRHEGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTL 649 SC + GG N++ D+++ NE ++VGTPGR+L LA K L F++DE DKML S D + V++I P + Q ++FSAT ++ K + P EI + DE LTL G+ Q+Y + E +K LN L L NQ +IF S +R L K + + + H+ M Q+ER + F++G R LV +DL+ RGIDI+ V + Sbjct: 127 SCMVT-TGGTNLR--DDIMRLNEPVHVLVGTPGRVLDLASRKVADLSECSLFVMDEADKML-SRDFKSLVEQILSFLPQNHQSLLFSATFPLTVKEFMVKHLNKPYEINLMDE--LTLKGITQYYAFVEERQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQQERNKVFHEFRQGKVRTLVCSDLLTRGIDIQAVNV 337 HSP 2 Score: 33.4982 bits (75), Expect = 1.076e-33 Identity = 12/21 (57.14%), Postives = 18/21 (85.71%), Query Frame = 1 Query: 637 ACHIVINYDMPDSADTYLHRV 699 A ++VIN+D P +A+TYLHR+ Sbjct: 334 AVNVVINFDFPKTAETYLHRI 354
BLAST of CX301777 vs. ExPASy Swiss-Prot
Match: IF4A_COCIM (ATP-dependent RNA helicase eIF4A OS=Coccidioides immitis GN=TIF1 PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 1.078e-33 Identity = 78/210 (37.14%), Postives = 124/210 (59.05%), Query Frame = 2 Query: 23 GGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTL 649 GG N++ L N+ PQ+VVGTPGR+ + + + L ++ F+LDE D+ML S + +IF+ P QV++ SAT+ +++ V KFM+DP+ I V +A+LTL G+ Q YI + + E K L+DL + + Q VIF + + L L+ +F +H M Q +R K F+ G+ R+L+ATDL+ RGID+++V+L Sbjct: 129 GGTNVREDIKAL-NDGPQVVVGTPGRVHDMIQRRVLKTDQMKMFVLDEADEML-SRGFTEQIYDIFQFLPQSTQVVLLSATMPQDVLDVTTKFMRDPVRILVK-KAELTLEGIKQFYIAVEKEEWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLIARDFTVSAMHGEMEQNQRDVIMKEFRSGSSRVLIATDLLARGIDVQQVSL 335 HSP 2 Score: 28.8758 bits (63), Expect = 1.078e-33 Identity = 9/18 (50.00%), Postives = 15/18 (83.33%), Query Frame = 1 Query: 646 IVINYDMPDSADTYLHRV 699 +VINYD+P + + Y+HR+ Sbjct: 335 LVINYDLPANRENYIHRI 352
BLAST of CX301777 vs. ExPASy Swiss-Prot
Match: DHH1_YEAST (ATP-dependent RNA helicase DHH1 OS=Saccharomyces cerevisiae GN=DHH1 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.400e-33 Identity = 81/217 (37.33%), Postives = 119/217 (54.84%), Query Frame = 2 Query: 2 SCRIRHEGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTL 649 SC + GG N++ D+L+ NE I+VGTPGR+L LA K L + FI+DE DKML S D + +++I P Q ++FSAT ++ K + P EI + +E LTL G+ Q+Y + E +K LN L L NQ +IF S +R L K + + + H+ M Q+ER + F++G R LV +DL+ RGIDI+ V + Sbjct: 144 SCMVT-TGGTNLR--DDILRLNETVHILVGTPGRVLDLASRKVADLSDCSLFIMDEADKML-SRDFKTIIEQILSFLPPTHQSLLFSATFPLTVKEFMVKHLHKPYEINLMEE--LTLKGITQYYAFVEERQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQQERNKVFHEFRQGKVRTLVCSDLLTRGIDIQAVNV 354 HSP 2 Score: 33.4982 bits (75), Expect = 1.400e-33 Identity = 12/21 (57.14%), Postives = 18/21 (85.71%), Query Frame = 1 Query: 637 ACHIVINYDMPDSADTYLHRV 699 A ++VIN+D P +A+TYLHR+ Sbjct: 351 AVNVVINFDFPKTAETYLHRI 371
BLAST of CX301777 vs. ExPASy Swiss-Prot
Match: DHH1_YEAS7 (ATP-dependent RNA helicase DHH1 OS=Saccharomyces cerevisiae (strain YJM789) GN=DHH1 PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.400e-33 Identity = 81/217 (37.33%), Postives = 119/217 (54.84%), Query Frame = 2 Query: 2 SCRIRHEGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTL 649 SC + GG N++ D+L+ NE I+VGTPGR+L LA K L + FI+DE DKML S D + +++I P Q ++FSAT ++ K + P EI + +E LTL G+ Q+Y + E +K LN L L NQ +IF S +R L K + + + H+ M Q+ER + F++G R LV +DL+ RGIDI+ V + Sbjct: 144 SCMVT-TGGTNLR--DDILRLNETVHILVGTPGRVLDLASRKVADLSDCSLFIMDEADKML-SRDFKTIIEQILSFLPPTHQSLLFSATFPLTVKEFMVKHLHKPYEINLMEE--LTLKGITQYYAFVEERQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQQERNKVFHEFRQGKVRTLVCSDLLTRGIDIQAVNV 354 HSP 2 Score: 33.4982 bits (75), Expect = 1.400e-33 Identity = 12/21 (57.14%), Postives = 18/21 (85.71%), Query Frame = 1 Query: 637 ACHIVINYDMPDSADTYLHRV 699 A ++VIN+D P +A+TYLHR+ Sbjct: 351 AVNVVINFDFPKTAETYLHRI 371
BLAST of CX301777 vs. ExPASy Swiss-Prot
Match: DHH1_KLULA (ATP-dependent RNA helicase DHH1 OS=Kluyveromyces lactis GN=DHH1 PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 3.092e-33 Identity = 82/217 (37.79%), Postives = 119/217 (54.84%), Query Frame = 2 Query: 2 SCRIRHEGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTL 649 SC + GG N++ D+++ NE I+VGTPGR+L LA + L FI+DE DKML S D + ++I P +Q+++FSAT ++ K +++P EI + DE LTL G+ Q Y + E +K LN L L NQ +IF S +R L K + E F H+ M Q ER + F++G R LV +DL+ RGIDI+ V + Sbjct: 134 SCMVT-TGGTNLR--DDIMRLNEPVHILVGTPGRVLDLASRRVTDLSECHLFIMDEADKML-SRDFKVLAEQILGFLPERRQLLLFSATFPVTVKEFMVKHLKNPHEINLMDE--LTLKGISQFYAFVEEKQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITELGFSCYYSHARMKQSERNKVFHEFRQGKVRTLVCSDLLTRGIDIQAVNV 344 HSP 2 Score: 33.4982 bits (75), Expect = 3.092e-33 Identity = 12/21 (57.14%), Postives = 18/21 (85.71%), Query Frame = 1 Query: 637 ACHIVINYDMPDSADTYLHRV 699 A ++VIN+D P +A+TYLHR+ Sbjct: 341 AVNVVINFDFPKTAETYLHRI 361
BLAST of CX301777 vs. ExPASy Swiss-Prot
Match: IF4A_CRYPV (Eukaryotic initiation factor 4A OS=Cryptosporidium parvum GN=EIF4-A PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 3.102e-33 Identity = 78/210 (37.14%), Postives = 123/210 (58.57%), Query Frame = 2 Query: 23 GGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTL 649 GG +++ + LK+ +VVGTPGR+ + L + N++ FILDE D+ML S + + +IFK P D QV +FSAT+ EI + +FM+DP I V E +LTL G+ Q Y+ + + E K L DL + L Q +I+ + R +L K + E +F +H M Q++R + F+ G+ R+L+ TDL+ RGID+++V+L Sbjct: 135 GGTSVRDDMNKLKSGV-HMVVGTPGRVFDMLDKGYLRVDNLKLFILDEADEML-SRGFKVQIHDIFKKLPQDVQVALFSATMPNEILHLTTQFMRDPKRILVKQE-ELTLEGIRQFYVGVEKDEWKMDTLIDLYETLTIVQAIIYCNTRRRVDQLTKQMRERDFTCSSMHGDMDQKDREVIMRQFRSGSSRVLITTDLLARGIDVQQVSL 341 HSP 2 Score: 31.5722 bits (70), Expect = 3.102e-33 Identity = 11/18 (61.11%), Postives = 16/18 (88.89%), Query Frame = 1 Query: 646 IVINYDMPDSADTYLHRV 699 +VINYD+P S +TY+HR+ Sbjct: 341 LVINYDLPVSPETYIHRI 358
BLAST of CX301777 vs. ExPASy Swiss-Prot
Match: IF4A_CANAL (ATP-dependent RNA helicase eIF4A OS=Candida albicans GN=TIF1 PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 4.041e-33 Identity = 79/194 (40.72%), Postives = 117/194 (60.31%), Query Frame = 2 Query: 74 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE--KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTL 649 QIVVGTPGR+L + + V+ FILDE D+ML S + + IF++ P Q+++ SAT+ +++ V KFM +P+ I V + +LTL G+ Q YI + ELE K L DL D++ Q VIF + S+ L L E +F IH+ + Q ER T K F+ G+ RIL++TDL+ RGID+++V+L Sbjct: 143 QIVVGTPGRVLDMIERRYFKTDKVKMFILDEADEMLSS-GFKEQIYNIFRLLPETTQIVLLSATMPQDVLEVTTKFMNNPVRILVKKD-ELTLEGIKQFYINV-ELEDYKFDCLCDLYDSISVTQAVIFCNTRSKVEFLTNKLREQHFTVSAIHADLPQAERDTIMKEFRSGSSRILISTDLLARGIDVQQVSL 333 HSP 2 Score: 28.8758 bits (63), Expect = 4.041e-33 Identity = 9/18 (50.00%), Postives = 15/18 (83.33%), Query Frame = 1 Query: 646 IVINYDMPDSADTYLHRV 699 +VINYD+P + + Y+HR+ Sbjct: 333 LVINYDLPANKENYIHRI 350
BLAST of CX301777 vs. ExPASy Swiss-Prot
Match: FAL1_CANGA (ATP-dependent RNA helicase FAL1 OS=Candida glabrata GN=FAL1 PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 4.041e-33 Identity = 74/203 (36.45%), Postives = 123/203 (60.59%), Query Frame = 2 Query: 47 KDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML-ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTL 649 K + K+ C Q++ GTPGR+L + + + + ++V+ +LDE D++L ++L + + +IF P QV++ SAT+S EI + KKFM DP++I V + ++TL G+ Q+Y+ + + E K L D+ D+L Q VIF S + L L + NF I +H M Q+ER F+ G R+L++TD+ RGID+++V+L Sbjct: 136 KKIQKHGC-QVISGTPGRVLDMIKRRLIETRHVQILVLDEADELLSDTLGFKHQIYDIFTKLPRTSQVVVVSATMSPEILEITKKFMNDPVKILVKRD-EITLEGIKQYYVNVEKEEWKFDTLCDIYDSLTITQCVIFCNSKKKVDWLAHKLKQSNFAVISMHGDMKQDERDRVMNEFRTGQSRVLISTDVWARGIDVQQVSL 336 HSP 2 Score: 29.261 bits (64), Expect = 4.041e-33 Identity = 9/18 (50.00%), Postives = 15/18 (83.33%), Query Frame = 1 Query: 646 IVINYDMPDSADTYLHRV 699 +VINYD+P+ + Y+HR+ Sbjct: 336 LVINYDLPEITENYVHRI 353 The following BLAST results are available for this feature:
BLAST of CX301777 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX301777 ID=CX301777; Name=CX301777; organism=Citrus sinensis; type=EST; length=699bpback to top |