CN191805

Overview
NameCN191805
Unique NameCN191805
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length727
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN191805 vs. ExPASy Swiss-Prot
Match: PEBP1_RAT (Phosphatidylethanolamine-binding protein 1 OS=Rattus norvegicus GN=Pebp1 PE=1 SV=3)

HSP 1 Score: 80.4925 bits (197), Expect = 1.024e-14
Identity = 55/161 (34.16%), Postives = 82/161 (50.93%), Query Frame = 2
Query:  110 PATEMTVHYGTKQVAN-GCEIKPSASADKPSVQIHAPPPASSNLYTLVMVDPDAPSPSEPRYREWLHWIVVDIPEGSDATKGKELVAYMGPQPP--TGIHRYVFALFNQKGKVMAGCRPP-------DARSNFSTRRFAADNGLQPPVAAVYFNSQKEVAV 562
            P   + V YG   V   G  + P+   ++PS  I         LYTLV+ DPDAPS  +P++REW H++VV++ +G+D + G  L  Y+G  PP  TG+HRYV+ ++ Q+  +   C  P       D R  F    F     L  PVA   F ++ + +V
Sbjct:   21 PQHALRVDYGGVTVDELGKVLTPTQVMNRPS-SISWDGLDPGKLYTLVLTDPDAPSRKDPKFREWHHFLVVNM-KGNDISSGTVLSEYVGSGPPKDTGLHRYVWLVYEQEQPL--NCDEPILSNKSGDNRGKFKVESFRKKYHLGAPVAGTCFQAEWDDSV 177          
BLAST of CN191805 vs. ExPASy Swiss-Prot
Match: PEBP1_PONAB (Phosphatidylethanolamine-binding protein 1 OS=Pongo abelii GN=PEBP1 PE=2 SV=3)

HSP 1 Score: 80.4925 bits (197), Expect = 1.024e-14
Identity = 44/114 (38.60%), Postives = 65/114 (57.02%), Query Frame = 2
Query:  227 SSNLYTLVMVDPDAPSPSEPRYREWLHWIVVDIPEGSDATKGKELVAYMGPQPP--TGIHRYVFALFNQK-----GKVMAGCRPPDARSNFSTRRFAADNGLQPPVAAVYFNSQ 547
            S  LYTLV+ DPDAPS  +P+YREW H++VV++ +G+D + G  L  Y+G  PP  TG+HRYV+ ++ Q       + +   R  D R  F    F     L+ PVA   + ++
Sbjct:   60 SGKLYTLVLTDPDAPSRKDPKYREWHHFLVVNM-KGNDISSGTVLSDYVGSGPPKGTGLHRYVWLVYEQDRPLKCDEPILSNRSGDHRGKFKVASFRKKYELRAPVAGTCYQAE 172          
BLAST of CN191805 vs. ExPASy Swiss-Prot
Match: PEBP1_HUMAN (Phosphatidylethanolamine-binding protein 1 OS=Homo sapiens GN=PEBP1 PE=1 SV=3)

HSP 1 Score: 80.4925 bits (197), Expect = 1.024e-14
Identity = 44/114 (38.60%), Postives = 65/114 (57.02%), Query Frame = 2
Query:  227 SSNLYTLVMVDPDAPSPSEPRYREWLHWIVVDIPEGSDATKGKELVAYMGPQPP--TGIHRYVFALFNQK-----GKVMAGCRPPDARSNFSTRRFAADNGLQPPVAAVYFNSQ 547
            S  LYTLV+ DPDAPS  +P+YREW H++VV++ +G+D + G  L  Y+G  PP  TG+HRYV+ ++ Q       + +   R  D R  F    F     L+ PVA   + ++
Sbjct:   60 SGKLYTLVLTDPDAPSRKDPKYREWHHFLVVNM-KGNDISSGTVLSDYVGSGPPKGTGLHRYVWLVYEQDRPLKCDEPILSNRSGDHRGKFKVASFRKKYELRAPVAGTCYQAE 172          
BLAST of CN191805 vs. ExPASy Swiss-Prot
Match: PEBP1_MACFA (Phosphatidylethanolamine-binding protein 1 OS=Macaca fascicularis GN=PEBP1 PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.282e-14
Identity = 44/114 (38.60%), Postives = 64/114 (56.14%), Query Frame = 2
Query:  227 SSNLYTLVMVDPDAPSPSEPRYREWLHWIVVDIPEGSDATKGKELVAYMGPQPP--TGIHRYVFALFNQK-----GKVMAGCRPPDARSNFSTRRFAADNGLQPPVAAVYFNSQ 547
            S  LYTLV+ DPDAPS  +P+YREW H++VV++ +G+D + G  L  Y+G  PP  TG+HRYV+ ++ Q       + +   R  D R  F    F     L  PVA   + ++
Sbjct:   60 SGKLYTLVLTDPDAPSRKDPKYREWHHFLVVNM-KGNDISSGTVLSDYVGSGPPKGTGLHRYVWLVYEQARPLKCDEPILSNRSGDHRGKFKVASFRKKYELGAPVAGACYQAE 172          
BLAST of CN191805 vs. ExPASy Swiss-Prot
Match: PEBP1_RABIT (Phosphatidylethanolamine-binding protein 1 OS=Oryctolagus cuniculus GN=PEBP1 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.083e-14
Identity = 43/111 (38.74%), Postives = 63/111 (56.76%), Query Frame = 2
Query:  236 LYTLVMVDPDAPSPSEPRYREWLHWIVVDIPEGSDATKGKELVAYMGPQPP--TGIHRYVFALFNQKGKV-----MAGCRPPDARSNFSTRRFAADNGLQPPVAAVYFNSQ 547
            LYTLV+ DPDAPS  +P+YREW H++VV++ +G + + G  L  Y+G  PP  TG+HRYV+ ++ Q G +     +   R  D R  F    F     L  PVA   + ++
Sbjct:   63 LYTLVLTDPDAPSRKDPKYREWHHFLVVNM-KGGNISSGTVLSDYVGSGPPKGTGLHRYVWLVYEQDGPLKCDEPVLSNRSGDHRGKFKVANFRKKYHLGTPVAGSCYQAE 172          
BLAST of CN191805 vs. ExPASy Swiss-Prot
Match: PEBP1_MOUSE (Phosphatidylethanolamine-binding protein 1 OS=Mus musculus GN=Pebp1 PE=1 SV=3)

HSP 1 Score: 77.7962 bits (190), Expect = 6.638e-14
Identity = 43/113 (38.05%), Postives = 64/113 (56.64%), Query Frame = 2
Query:  236 LYTLVMVDPDAPSPSEPRYREWLHWIVVDIPEGSDATKGKELVAYMGPQPP--TGIHRYVFALFNQKGKVMAGCRPP-------DARSNFSTRRFAADNGLQPPVAAVYFNSQ 547
            LYTLV+ DPDAPS  +P++REW H++VV++ +G+D + G  L  Y+G  PP  TG+HRYV+ ++ Q+  +   C  P       D R  F    F     L  PVA   + ++
Sbjct:   63 LYTLVLTDPDAPSRKDPKFREWHHFLVVNM-KGNDISSGTVLSDYVGSGPPSGTGLHRYVWLVYEQEQPL--SCDEPILSNKSGDNRGKFKVETFRKKYNLGAPVAGTCYQAE 172          
BLAST of CN191805 vs. ExPASy Swiss-Prot
Match: PEBP2_MOUSE (Phosphatidylethanolamine-binding protein 2 OS=Mus musculus GN=Pbp2 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.479e-13
Identity = 43/111 (38.74%), Postives = 63/111 (56.76%), Query Frame = 2
Query:  236 LYTLVMVDPDAPSPSEPRYREWLHWIVVDIPEGSDATKGKELVAYMGPQPP--TGIHRYVFALFNQK-----GKVMAGCRPPDARSNFSTRRFAADNGLQPPVAAVYFNSQ 547
            LYTL++ DPDAPS  +P YREW H++VV++ +G+D + G  L  Y+G  PP  TG+HRYV+ ++ Q       + +   R  D R  F T  F     L  PVA   + ++
Sbjct:   63 LYTLILTDPDAPSRKKPVYREWHHFLVVNM-KGNDISSGNVLSDYVGSGPPKGTGLHRYVWLVYQQDKPLRCDEPILTNRSGDHRGKFKTAAFRKKYHLGAPVAGTCYQAE 172          
BLAST of CN191805 vs. ExPASy Swiss-Prot
Match: TES26_TOXCA (26 kDa secreted antigen OS=Toxocara canis GN=TES-26 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.757e-12
Identity = 49/154 (31.82%), Postives = 76/154 (49.35%), Query Frame = 2
Query:  110 PATEMTVHYGTK-QVANGCEIKPSASADKPSVQIHAPPPASSNLYTLVMVDPDAPSPSEPRYREWLHWIVVDIPEGSDATKGKELVAYMGPQPP--TGIHRYVFALFNQKGKVMAGCR-----PPDARSNFSTRRFAADNGLQPPVAAVYFNSQ 547
            P+  ++V +    QV  G  +  +  A++P+V   A P   ++ YTL+MVDPD PS +  +  + LHW V++IP G++   G  L A+    P   TG+HRYVF ++ Q   + +            R  F T  FA    L  P A  ++ SQ
Sbjct:  112 PSRRVSVTFANNVQVNCGNTLTTAQVANQPTVTWEAQP---NDRYTLIMVDPDFPSAANGQQGQRLHWWVINIP-GNNIAGGTTLAAFQPSTPAANTGVHRYVFLVYRQPAAINSPLLNNLVVQDSERPGFGTTAFATQFNLGSPYAGNFYRSQ 261          
The following BLAST results are available for this feature:
BLAST of CN191805 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
PEBP1_RAT1.024e-1434.16Phosphatidylethanolamine-binding protein 1 OS=Ratt... [more]
PEBP1_PONAB1.024e-1438.60Phosphatidylethanolamine-binding protein 1 OS=Pong... [more]
PEBP1_HUMAN1.024e-1438.60Phosphatidylethanolamine-binding protein 1 OS=Homo... [more]
PEBP1_MACFA2.282e-1438.60Phosphatidylethanolamine-binding protein 1 OS=Maca... [more]
PEBP1_RABIT5.083e-1438.74Phosphatidylethanolamine-binding protein 1 OS=Oryc... [more]
PEBP1_MOUSE6.638e-1438.05Phosphatidylethanolamine-binding protein 1 OS=Mus ... [more]
PEBP2_MOUSE1.479e-1338.74Phosphatidylethanolamine-binding protein 2 OS=Mus ... [more]
TES26_TOXCA4.757e-1231.8226 kDa secreted antigen OS=Toxocara canis GN=TES-2... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0005N22_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0005N22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN191805 ID=CN191805; Name=CN191805; organism=Citrus sinensis; type=EST; length=727bp
AGAGAAAAGAAAATTACAAGTCACAAGAAAGAAGCACGTCGACATGGCGC
GGTCTATGGAGCCACTGGTTGTTGGGAGAGTGATTGGAGATGTAGTTGAC
ATGTTCACTCCAGCCACTGAAATGACGGTCCATTATGGGACTAAACAGGT
TGCTAACGGCTGTGAGATCAAGCCCTCTGCTTCTGCTGACAAGCCCAGCG
TCCAAATTCATGCTCCTCCTCCTGCCTCTTCCAATCTCTACACACTTGTT
ATGGTGGATCCCGATGCTCCAAGTCCGAGCGAACCCAGATACAGAGAGTG
GCTCCATTGGATTGTTGTAGATATTCCAGAAGGATCAGATGCCACCAAAG
GAAAAGAGTTGGTGGCATACATGGGACCCCAGCCACCCACCGGAATCCAC
CGCTATGTGTTTGCGCTCTTCAATCAGAAGGGTAAAGTGATGGCCGGTTG
TCGACCTCCCGACGCTCGCAGCAATTTCAGCACCCGCCGATTTGCTGCTG
ACAATGGCCTTCAGCCTCCAGTTGCTGCTGTCTATTTTAATTCACAGAAA
GAAGTTGCTGTCAGAAAGCGTTGACGAATGTTGTTATTGAGTAGCCTGAT
GAAATGTTGTCAATGATTTTTTCTGTAATTATTAGCAAAACATATTTGGG
TTTATTTCTGCGTGTTTTTTTTTTGCCCTTTTGGTAATTTCTTTCGGTCG
CGCTTCTTGAAAATTTTATTAGTTTTT
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