CN191802

Overview
NameCN191802
Unique NameCN191802
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length745
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN191802 vs. ExPASy Swiss-Prot
Match: TRXB_COXBU (Thioredoxin reductase OS=Coxiella burnetii GN=trxB PE=3 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 2.527e-24
Identity = 62/148 (41.89%), Postives = 83/148 (56.08%), Query Frame = -3
Query:  309 VYIIHRRDSFRVSKIMQNRALTNP---KIDVIWNSVVIEAYGEXXXXXXXXXXXXXXVTGQVSDLKVSGLFFAIGHEPATKFVDGQLDLHSDGYIITKPG----TTHTSVPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAEHYLQEI 731
            V +IHRRD  R  K++  + +      K+ ++W+ V+ E  G+                 Q  DL + GLF AIGH+P TK    QL++   GY+  K G     T T++PGVFAAGDV D  YRQA+TAAG GCMAAL+AE YL  +
Sbjct:  172 VTLIHRRDKLRAEKMLSAQLIKKVEEGKVAIVWSHVIEEVLGDDQGVTGVHLKHVKEEKTQ--DLTIDGLFIAIGHDPNTKIFKEQLEMDEAGYLRAKSGLQGNATATNIPGVFAAGDVTDHVYRQAITAAGMGCMAALDAERYLDSL 317          
BLAST of CN191802 vs. ExPASy Swiss-Prot
Match: TRXB_ECOLI (Thioredoxin reductase OS=Escherichia coli (strain K12) GN=trxB PE=1 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.254e-23
Identity = 66/146 (45.21%), Postives = 85/146 (58.22%), Query Frame = -3
Query:  318 KVYIIHRRDSFRVSKIMQNRALT---NPKIDVIWNSVVIEAYGEXXXXXXXXXXXXXXVTGQVSDLKVSGLFFAIGHEPATKFVDGQLDLHSDGYIITKPG----TTHTSVPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAEHYL 734
            +V++IHRRD FR  KI+  R +    N  I +  N  + E  G+               +  +  L V+GLF AIGH P T   +GQL+L + GYI  + G     T TS+PGVFAAGDV D  YRQA+T+AGTGCMAAL+AE YL
Sbjct:  171 EVHLIHRRDGFRAEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQN-SDNIESLDVAGLFVAIGHSPNTAIFEGQLELEN-GYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAERYL 314          
BLAST of CN191802 vs. ExPASy Swiss-Prot
Match: TRXB_ECO57 (Thioredoxin reductase OS=Escherichia coli O157:H7 GN=trxB PE=3 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.254e-23
Identity = 66/146 (45.21%), Postives = 85/146 (58.22%), Query Frame = -3
Query:  318 KVYIIHRRDSFRVSKIMQNRALT---NPKIDVIWNSVVIEAYGEXXXXXXXXXXXXXXVTGQVSDLKVSGLFFAIGHEPATKFVDGQLDLHSDGYIITKPG----TTHTSVPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAEHYL 734
            +V++IHRRD FR  KI+  R +    N  I +  N  + E  G+               +  +  L V+GLF AIGH P T   +GQL+L + GYI  + G     T TS+PGVFAAGDV D  YRQA+T+AGTGCMAAL+AE YL
Sbjct:  171 EVHLIHRRDGFRAEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQN-SDNIESLDVAGLFVAIGHSPNTAIFEGQLELEN-GYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAERYL 314          
BLAST of CN191802 vs. ExPASy Swiss-Prot
Match: TRXB_VIBCH (Thioredoxin reductase OS=Vibrio cholerae GN=trxB PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.638e-23
Identity = 63/150 (42.00%), Postives = 89/150 (59.33%), Query Frame = -3
Query:  306 KVYIIHRRDSFRVSKIMQNRAL---TNPKIDVIWNSVVIEAYGEXXXXXXXXXXXXXXVTGQVSDLKVSGLFFAIGHEPATKFVDGQLDLHSDGYIITKPG----TTHTSVPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAEHYLQEIG 734
            +V+++HRRDSFR  KI+ +R +    N  I +  +  + E  G+               +    +L V G+F AIGH+P ++  +GQL++  +GYI+ K G     T TS+ GVFAAGDV D  YRQA+T+AGTGCMAAL+AE YL   G
Sbjct:  171 EVHLVHRRDSFRSEKILIDRLMDKVANGNIVLHTHRTLDEVLGDEMGVTGVRLKDTQ--SDMTENLDVMGVFIAIGHQPNSQIFEGQLEM-KNGYIVVKSGLEGNATQTSIEGVFAAGDVMDHNYRQAITSAGTGCMAALDAERYLDSQG 317          
BLAST of CN191802 vs. ExPASy Swiss-Prot
Match: TRXB_BUCAP (Thioredoxin reductase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=trxB PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.460e-21
Identity = 60/150 (40.00%), Postives = 85/150 (56.67%), Query Frame = -3
Query:  309 QKVYIIHRRDSFRVSKIMQNRALT---NPKIDVIWNSVVIEAYGEXXXXXXXXXXXXXXVTGQVSDLKVSGLFFAIGHEPATKFVDGQLDLHSDGYIITKPGT----THTSVPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAEHYLQEI 737
            +K+Y+IHRR++F+  KI+ +R L      K+ +  NS + +  G                  +   + VSGLF AIG+ P T     QL +  DGYI  K GT    T T++PGVFAAGDV D  YRQA+T++ +GCMAAL++E YL  +
Sbjct:  170 KKIYLIHRRNNFKAEKILIDRLLKIVKTKKVILHLNSTIEDILGNNKGVTHLLIKNKNLKEKKKLKIAVSGLFVAIGYIPNTDIFTDQLKM-KDGYIKIKKGTHGNYTQTNIPGVFAAGDVIDHVYRQAITSSASGCMAALDSERYLNSL 318          
BLAST of CN191802 vs. ExPASy Swiss-Prot
Match: TRXB_BACSU (Thioredoxin reductase OS=Bacillus subtilis GN=trxB PE=1 SV=3)

HSP 1 Score: 98.5969 bits (244), Expect = 3.776e-20
Identity = 55/142 (38.73%), Postives = 76/142 (53.52%), Query Frame = -3
Query:  309 KVYIIHRRDSFRVSKIMQNRALTNPKIDVIWNSVVIEAYGEXXXXXXXXXXXXXXVTGQVSDLKVSGLFFAIGHEPATKFVDGQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAEHYLQEI 734
            KV I+HRRD  R   I+Q RA  N K+D +WN  V E + E               TG+ S+ K  G+F  IG  P +K  +     + +GYI T      T V G+FAAGD+++K  RQ VTA G G +AA   +HY++E+
Sbjct:  170 KVTIVHRRDKLRAQSILQARAFDNEKVDFLWNKTVKEIHEENGKVGNVTLVDTV--TGEESEFKTDGVFIYIGMLPLSKPFENLGITNEEGYIETND-RMETKVEGIFAAGDIREKSLRQIVTATGDGSIAAQSVQHYVEEL 308          
BLAST of CN191802 vs. ExPASy Swiss-Prot
Match: TRXB_CLOLI (Thioredoxin reductase OS=Clostridium litorale GN=trxB PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.412e-20
Identity = 55/149 (36.91%), Postives = 85/149 (57.05%), Query Frame = -3
Query:  309 QKVYIIHRRDSFRVSKIMQNRALTNPKIDVIWNSVVIEAYGEXXXXXXXXXXXXXXVTGQVSDLKVS------GLFFAIGHEPATKFVDGQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAEHYLQEI 737
            +KV I+HRR   R +K +Q +A  N K++ +WN+V+ E  G+               TG+V++          G+F  IG++P +  V+G+L+L   GYI T      T+V GVFAAGD++ K  RQ VTA   G +AA++AE Y++E+
Sbjct:  168 RKVTIVHRRAELRAAKSIQEKAFKNEKLNFMWNTVIEEIKGDGIVESAVFKNRE---TGEVTEFVAPEEDGTFGIFVFIGYDPKSALVEGKLELDETGYIPTDDNMK-TNVEGVFAAGDIRVKSLRQVVTATADGAIAAVQAEKYIEEL 312          
BLAST of CN191802 vs. ExPASy Swiss-Prot
Match: TRXB_BUCBP (Thioredoxin reductase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=trxB PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.412e-20
Identity = 57/148 (38.51%), Postives = 85/148 (57.43%), Query Frame = -3
Query:  312 QKVYIIHRRDSFRVSKIMQNRALTNPKIDVIWNS--VVIEAYGEXXXXXXXXXXXXXXVTGQVSDLKVSGLFFAIGHEPATKFVDGQLDLHSDGYIITKPG----TTHTSVPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAEHYLQE 737
            +KVY+IHRR +F   KI+ +R L   K ++I  +  +V +  G                  +   + +SG+F AIGH P TK    QL + +D YI+ K G     T T++PG+FAAGDV D  Y+QA+T++ +GCMAAL+AE Y+ +
Sbjct:  175 RKVYLIHRRKTFSAEKILISRMLNKTKKNIILRTGCIVNKIIGGVNGVRGVQITCNDSKENKCL-INLSGVFIAIGHAPNTKLFKNQLFMKND-YILVKSGIHGNVTQTNIPGIFAAGDVIDHVYKQAITSSASGCMAALDAEKYIDQ 320          
BLAST of CN191802 vs. ExPASy Swiss-Prot
Match: TRXB_BUCAI (Thioredoxin reductase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=trxB PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.197e-19
Identity = 58/150 (38.67%), Postives = 85/150 (56.67%), Query Frame = -3
Query:  309 QKVYIIHRRDSFRVSKIMQNRA---LTNPKIDVIWNSVVIEAYGEXXXXXXXXXXXXXXVTGQVSDLKVSGLFFAIGHEPATKFVDGQLDLHSDGYI-ITKP---GTTHTSVPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAEHYLQEI 737
            +KV++IHR  +FR  KI+ +R    + + KI +  NS+V    G                    S ++VSGLF AIG+ P T     +L +  DGYI +T+      T TS+PG+FAAGDV D  YRQA+T++ +GCMAAL++E Y+  +
Sbjct:  170 KKVHLIHRGINFRAEKILLDRLEKKIKSQKIIIYLNSIVKNILGNSSGVTALLIEQKNSKEKTESKIQVSGLFVAIGYTPNTNIFVNKLKM-KDGYIQVTRQEHGNYTQTSIPGIFAAGDVIDHVYRQAITSSASGCMAALDSERYINSL 318          
BLAST of CN191802 vs. ExPASy Swiss-Prot
Match: TRXB_EUBAC (Thioredoxin reductase OS=Eubacterium acidaminophilum GN=trxB PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.453e-19
Identity = 56/147 (38.10%), Postives = 81/147 (55.10%), Query Frame = -3
Query:  315 QKVYIIHRRDSFRVSKIMQNRALTNPKIDVIWNSVVIEAYGEXXXXXXXXXXXXXXVTGQVSDLKVS------GLFFAIGHEPATKFVDGQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAEHYLQ 737
            +KV I+HRRD  R +K +Q +A  NPK+D +WNS + E  G+              VTG+ ++   +      G+F  IG+ P +    G++ L   GYIIT      T+V GVFAAGD++ K  RQ VTA   G +AA +AE Y++
Sbjct:  168 RKVTIVHRRDELRAAKSIQEKAFKNPKLDFMWNSAIEEIKGD---GIVESAVFKNLVTGETTEYFANEEDGTFGIFVFIGYIPKSDVFKGKITLDDAGYIIT-DDNMKTNVEGVFAAGDIRVKSLRQVVTACADGAIAATQAEKYVE 310          
The following BLAST results are available for this feature:
BLAST of CN191802 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
TRXB_COXBU2.527e-2441.89Thioredoxin reductase OS=Coxiella burnetii GN=trxB... [more]
TRXB_ECOLI1.254e-2345.21Thioredoxin reductase OS=Escherichia coli (strain ... [more]
TRXB_ECO571.254e-2345.21Thioredoxin reductase OS=Escherichia coli O157:H7 ... [more]
TRXB_VIBCH1.638e-2342.00Thioredoxin reductase OS=Vibrio cholerae GN=trxB P... [more]
TRXB_BUCAP4.460e-2140.00Thioredoxin reductase OS=Buchnera aphidicola subsp... [more]
TRXB_BACSU3.776e-2038.73Thioredoxin reductase OS=Bacillus subtilis GN=trxB... [more]
TRXB_CLOLI8.412e-2036.91Thioredoxin reductase OS=Clostridium litorale GN=t... [more]
TRXB_BUCBP8.412e-2038.51Thioredoxin reductase OS=Buchnera aphidicola subsp... [more]
TRXB_BUCAI3.197e-1938.67Thioredoxin reductase OS=Buchnera aphidicola subsp... [more]
TRXB_EUBAC5.453e-1938.10Thioredoxin reductase OS=Eubacterium acidaminophil... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0005N18_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0005N18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN191802 ID=CN191802; Name=CN191802; organism=Citrus sinensis; type=EST; length=745bp
GAGGGACAATAAGGTAAAGAATAATATATTCTTAAAAAATTCCAACCAAC
AATTACATTCTAAAATGCAGCACTAATACCAACTTAAAACAAATTCCTTA
TCCAATTAGTTTTTCCAACCAACTATTGGAAGCCAATAAATAAGTCACCA
AGACAGTACTGATTCATCACTTGAATTGGTCGAGAAAAGGCCTTCTTCAT
TCAGAGGTAGATTTAGATCAAGTTTGCATGTAGACTATTCTGCTTTCATC
ATATCCCAGCCCTGCCATTATCCTACAGTGAAGATTCACTCTTATCCTCG
TGAGATCCTATCTCTTGCAAGTAATGCTCAGCTTCCAAGGCTGCCATGCA
CCCAGTGCCGGCGGCGGTAACAGCCTGCCTGTACTTCTTATCCTGAACAT
CTCCAGCAGCAAAAACTCCAGGGACACTAGTGTGTGTAGTCCCAGGTTTG
GTAATAATATAACCATCAGAATGCAGGTCCAACTGACCATCCACAAACTT
AGTAGCAGGCTCGTGTCCAATGGCAAAGAACAAGCCAGACACCTTCAAAT
CAGAAACCTGTCCAGTCACCAAATTCTTCACCTTCAATCCTCCCAGAACC
TTCTTATCCCCTTCTCCATAAGCCTCTATAACAACCGAATTCCAAATCAC
ATCAATCTTAGGGTTCGTAAGTGCCCTGTTTTGCATAATCTTCGAAACTC
TAAAACTATCCCTCCTATGAATTATATAAACTTTTTGATCCGTAC
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