CN191769

Overview
NameCN191769
Unique NameCN191769
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length643
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN191769 vs. ExPASy Swiss-Prot
Match: E13L3_ARATH (Glucan endo-1,3-beta-glucosidase-like protein 3 OS=Arabidopsis thaliana GN=At5g08000 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.485e-16
Identity = 36/88 (40.91%), Postives = 53/88 (60.23%), Query Frame = -3
Query:  243 TWCVANANAGEKKLQAAIDYACGEGGADCRPIQEGATCYDPNTLEAHASYAFNSYYQKQVRKAGSCDFGGAAYVVTQAPKYGKCQFPT 506
            +WCV      +  LQ  +DYACG G ADC P     +C++P+ + AH +YA NS++QK+ + + SC+F G A + T  P Y  C FP+
Sbjct:   20 SWCVCKTGLSDSVLQKTLDYACGNG-ADCNPTHPKGSCFNPDNVRAHCNYAVNSFFQKKGQASESCNFTGTATLTTTDPSYTGCAFPS 106          
BLAST of CN191769 vs. ExPASy Swiss-Prot
Match: E13L4_ARATH (Glucan endo-1,3-beta-glucosidase-like protein At1g69295 OS=Arabidopsis thaliana GN=At1g69295 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.177e-13
Identity = 37/69 (53.62%), Postives = 42/69 (60.87%), Query Frame = -3
Query:  270 EKKLQAAIDYACGEGGADCRPIQEGATCYDPNTLEAHASYAFNSYYQKQVRKAGSCDFGGAAYVVTQAP 476
            E+ LQ AIDYACG G ADC  IQ    CY PNT++ H   A NSYYQK+     +CDF GAA   T  P
Sbjct:   29 EQVLQKAIDYACGNG-ADCTQIQPTGACYQPNTVKNHCDVAVNSYYQKKASSGATCDFNGAASPSTTPP 96          
BLAST of CN191769 vs. ExPASy Swiss-Prot
Match: EA6_ARATH (Probable glucan endo-1,3-beta-glucosidase A6 OS=Arabidopsis thaliana GN=A6 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.433e-12
Identity = 31/89 (34.83%), Postives = 47/89 (52.81%), Query Frame = -3
Query:  243 QTWCVANANAGEKKLQAAIDYACGEGGADCRPIQEGATCYDPNTLEAHASYAFNSYYQKQVRKAGSCDFGGAAYVVTQAPKYGKCQFPT 509
            Q WCV    A E +L+  +  AC +    C  +  G  CY+P ++  HASYA NSY+ +   ++  C F G A+  T  P   +C+FP+
Sbjct:  387 QVWCVPVEGANETELEETLRMACAQSNTTCAALAPGRECYEPVSIYWHASYALNSYWAQFRNQSIQCFFNGLAHETTTNPGNDRCKFPS 475          
The following BLAST results are available for this feature:
BLAST of CN191769 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
E13L3_ARATH1.485e-1640.91Glucan endo-1,3-beta-glucosidase-like protein 3 OS... [more]
E13L4_ARATH1.177e-1353.62Glucan endo-1,3-beta-glucosidase-like protein At1g... [more]
EA6_ARATH8.433e-1234.83Probable glucan endo-1,3-beta-glucosidase A6 OS=Ar... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0005M17_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0005M17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN191769 ID=CN191769; Name=CN191769; organism=Citrus sinensis; type=EST; length=643bp
ATCATTTAGAATAAATACAANTAAGGATTTGATCATATTGACACTAGAGT
CAAACCAACTGATAACAACCGCACCCACTCAGCGTACTAGTATATAAAAT
TTAAATACAAGGGAGAAAAATTAATGTTCCAATCGTCTAAATCTATCAGA
AAAAATCATCACCAATCGTAAGCCGCGAGAAAGCTCCAAATCTGCAGACC
ACAAATCAGCTAATGCTCCCTATTTTTTCCCACTCAATAGCCAGTTGGGA
ACTGGCATTTTCCATATTTAGGAGCCTGCGTGACCACGTAGGCCGCACCA
CCAAAATCACAAGATCCAGCCTTACGCACTTGCTTCTGATAATAACTATT
GAAGGCATACGATGCATGGGCTTCTAACGTGTTAGGATCGTAACACGTGG
CGCCCTCTTGAATCGGACGGCAATCAGCGCCTCCCTCGCCGCAGGCATAA
TCAATTGCGGCTTGCAACTTTTTCTCACCAGCATTCGCGTTAGCCACGCA
CCAAGTCTGTCCCGCCGCCGAGGGCGACACGTCACCACCGCCTCCTCCGC
TCACCGGAACTTGAGTCTTGCTCTTATTGGCTGCCGGCGTTGAGCTTGAG
TTCCCACTAGTTGACACAAACGGCGAGTCGTACACCGTCTCCT
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