CN191766

Overview
NameCN191766
Unique NameCN191766
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length640
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN191766 vs. ExPASy Swiss-Prot
Match: FTSH_MYCLE (Cell division protease ftsH homolog OS=Mycobacterium leprae GN=ftsH PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.777e-15
Identity = 42/91 (46.15%), Postives = 57/91 (62.64%), Query Frame = -1
Query:  365 MVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLF 637
            MV  FG S K+G V  G   G+PFLG+ M +Q DYS   A  +D EVR+L+E A+T A +I+T + D+L  LA  L+EKET+   E   +F
Sbjct:  512 MVTEFGMSSKLGAVRYGSEHGDPFLGRTMGTQADYSHEVARDIDDEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPELEGIF 602          
BLAST of CN191766 vs. ExPASy Swiss-Prot
Match: FSTH_PORYE (Cell division protease ftsH homolog OS=Porphyra yezoensis GN=ftsH PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.064e-14
Identity = 41/91 (45.05%), Postives = 58/91 (63.74%), Query Frame = -1
Query:  368 QMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 640
            QMV RFG SK IG +++   GG+PFLG+ M    +YS   A  +D +VRE+V   Y +AK II  +  ++ +L  LLIEKET++G EF  +
Sbjct:  522 QMVTRFGMSK-IGPLSLESQGGDPFLGRGMGGGSEYSDEVATNIDKQVREIVSECYAQAKHIIIDNRVVIDRLVDLLIEKETIEGNEFRDI 611          
BLAST of CN191766 vs. ExPASy Swiss-Prot
Match: FTSH_PORPU (Cell division protease ftsH homolog OS=Porphyra purpurea GN=ftsH PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.177e-13
Identity = 39/88 (44.32%), Postives = 56/88 (63.64%), Query Frame = -1
Query:  377 QMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEF 640
            QMV RFG SK IG +++   G +PFLG+ M    +YS   A  +D +VRE+V   Y  AK+I+  +  ++ +L  LLIEKET++G EF
Sbjct:  522 QMVTRFGMSK-IGPLSLESQGSDPFLGRGMGGGSEYSDEVATNIDKQVREIVSECYKEAKKIVKDNRVVMDRLVDLLIEKETIEGNEF 608          
BLAST of CN191766 vs. ExPASy Swiss-Prot
Match: FTSH1_SYNY3 (Cell division protease ftsH homolog 1 OS=Synechocystis sp. (strain PCC 6803) GN=slr0228 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.007e-13
Identity = 37/91 (40.66%), Postives = 58/91 (63.74%), Query Frame = -1
Query:  368 QMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 640
            QMV RFG S  +G +++   GG  FLG  + ++ +YS   A  +DA+VR+L E  +  A++I+    +++ +L  LLIEKET+DGEEF  +
Sbjct:  521 QMVTRFGMSN-LGPISLESSGGEVFLGGGLMNRSEYSEEVATRIDAQVRQLAEQGHQMARKIVQEQREVVDRLVDLLIEKETIDGEEFRQI 610          
BLAST of CN191766 vs. ExPASy Swiss-Prot
Match: FTSH_GUITH (Cell division protease ftsH homolog OS=Guillardia theta GN=ftsH PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.840e-13
Identity = 39/94 (41.49%), Postives = 56/94 (59.57%), Query Frame = -1
Query:  359 QMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFID 640
            QMV RFG S  IG +++     +PFLG+ M S   YS   A  +D +VR +++  +T   QII  +  ++ KL  LLIEKET+DG+EF  +  D
Sbjct:  522 QMVTRFGMSN-IGPLSLESQNSDPFLGRTMGSSSQYSEDIASRIDMQVRAIIQHCHTETVQIIKDNRVVIDKLVDLLIEKETIDGDEFRQIVGD 614          
BLAST of CN191766 vs. ExPASy Swiss-Prot
Match: FTSH_BACPF (Cell division protease ftsH homolog OS=Bacillus pseudofirmus GN=ftsH PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.840e-13
Identity = 37/97 (38.14%), Postives = 62/97 (63.92%), Query Frame = -1
Query:  353 QMVERFGFSKKIGQVA-IGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGK 640
            +MV  +G S+K+G +  I G GG  FLG+ + ++++YS A A  +D EV+ +++  Y R KQI+  + D L  +A+ L++ ET+D E+  SL  +GK
Sbjct:  514 KMVTEYGMSEKLGPMQFISGSGGQVFLGRDIQNEQNYSDAIAHEIDLEVQRIIKECYARCKQILLENKDSLDLVAKTLLDMETLDAEQIKSLVHEGK 610          
BLAST of CN191766 vs. ExPASy Swiss-Prot
Match: FTSH_LACLA (Cell division protease ftsH homolog OS=Lactococcus lactis subsp. lactis GN=ftsH PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.301e-12
Identity = 40/95 (42.11%), Postives = 58/95 (61.05%), Query Frame = -1
Query:  353 MVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGK 637
            MV  +G SKK+G V+  G     F+G+     K YS ATA ++D EVR ++  AY RAK+ I TH +    +A+ L++ ET+D ++ MSLF  GK
Sbjct:  543 MVTEYGMSKKLGMVSYEGDH-QVFIGRDYGQTKTYSEATAVMIDDEVRRILGEAYDRAKEAIETHREQHKAIAEALLKYETLDAKQIMSLFKTGK 636          
BLAST of CN191766 vs. ExPASy Swiss-Prot
Match: FTSH_SALTY (Cell division protease ftsH OS=Salmonella typhimurium GN=ftsH PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.219e-12
Identity = 35/90 (38.89%), Postives = 56/90 (62.22%), Query Frame = -1
Query:  368 MVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 637
            MV ++GFS+K+G +      G  FLG+ ++  K  S  TA ++D EV+ L+E  Y RA+QI+T ++DILH +   L++ ET+D  +   L
Sbjct:  503 MVTQWGFSEKLGPLLYAEEEGEVFLGRSVAKAKHMSDETARIIDQEVKALIERNYNRARQILTDNMDILHAMKDALMKYETIDAPQIDDL 592          
BLAST of CN191766 vs. ExPASy Swiss-Prot
Match: FTSH_SALTI (Cell division protease ftsH OS=Salmonella typhi GN=ftsH PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.219e-12
Identity = 35/90 (38.89%), Postives = 56/90 (62.22%), Query Frame = -1
Query:  368 MVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 637
            MV ++GFS+K+G +      G  FLG+ ++  K  S  TA ++D EV+ L+E  Y RA+QI+T ++DILH +   L++ ET+D  +   L
Sbjct:  503 MVTQWGFSEKLGPLLYAEEEGEVFLGRSVAKAKHMSDETARIIDQEVKALIERNYNRARQILTDNMDILHAMKDALMKYETIDAPQIDDL 592          
BLAST of CN191766 vs. ExPASy Swiss-Prot
Match: FTSH_SHIFL (Cell division protease ftsH OS=Shigella flexneri GN=ftsH PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.785e-12
Identity = 34/90 (37.78%), Postives = 56/90 (62.22%), Query Frame = -1
Query:  368 MVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 637
            MV ++GFS+K+G +      G  FLG+ ++  K  S  TA ++D EV+ L+E  Y RA+Q++T ++DILH +   L++ ET+D  +   L
Sbjct:  503 MVTQWGFSEKLGPLLYAEEEGEVFLGRSVAKAKHMSDETARIIDQEVKALIERNYNRARQLLTDNMDILHAMKDALMKYETIDAPQIDDL 592          
The following BLAST results are available for this feature:
BLAST of CN191766 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
FTSH_MYCLE4.777e-1546.15Cell division protease ftsH homolog OS=Mycobacteri... [more]
FSTH_PORYE1.064e-1445.05Cell division protease ftsH homolog OS=Porphyra ye... [more]
FTSH_PORPU1.177e-1344.32Cell division protease ftsH homolog OS=Porphyra pu... [more]
FTSH1_SYNY32.007e-1340.66Cell division protease ftsH homolog 1 OS=Synechocy... [more]
FTSH_GUITH5.840e-1341.49Cell division protease ftsH homolog OS=Guillardia ... [more]
FTSH_BACPF5.840e-1338.14Cell division protease ftsH homolog OS=Bacillus ps... [more]
FTSH_LACLA1.301e-1242.11Cell division protease ftsH homolog OS=Lactococcus... [more]
FTSH_SALTY2.219e-1238.89Cell division protease ftsH OS=Salmonella typhimur... [more]
FTSH_SALTI2.219e-1238.89Cell division protease ftsH OS=Salmonella typhi GN... [more]
FTSH_SHIFL3.785e-1237.78Cell division protease ftsH OS=Shigella flexneri G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0005M15_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0005M15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN191766 ID=CN191766; Name=CN191766; organism=Citrus sinensis; type=EST; length=640bp
GAGGAGGACTTGCACATTTGAAACGTCAAAATCAGAAAGAATGTGCTAGT
AATCGATCTTCCTAACGTATGATCTAAAACAATCACGAGTGTGAGGAACT
ATTAAGTTTGAAGTTTCATTTACAGGAATGCAGATACAAATCTTGGTGGT
TTTGATTAAAAAGGCTGATCTTGGCTTGGCTTGGCTTCCTCATTAGGCGT
AGCCAAGTAGATAAAGCTGTAACACAAATCCTCCTAAAAACCTCCCCATA
TTTCTAAAATGATAATTTAATTACTTGATTTTACATGGGCATATACAACA
CGAATCTGAATTCTGATTCTTTCATGTACAATCAGGCAACAAATAGCTCA
GCTTTTCCATCAATGAAAAGGCTCATAAATTCTTCTCCATCAACGGTTTC
TTTCTCTATGAGGAGTTGAGCAAGCTTGTGAAGGATGTCAATGTGGGTTG
TGATGATCTGCTTGGCCCTTGTATATGCTGTTTCAACCAATTCTCTGACC
TCTGCATCCACCACATCGGCAGTTGCCATGGAGTAGTCTTTCTGAGAAGA
CATTTGTTGACCCAAGAATGGATTTCCACCAGGTCCTCCAATGGCAACTT
GTCCAATTTTCTTGCTAAACCCAAATCTTTCAACCATCTG
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