CN191763

Overview
NameCN191763
Unique NameCN191763
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length507
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN191763 vs. ExPASy Swiss-Prot
Match: DAPL_ANOFW (Putative N-acetyldiaminopimelate deacetylase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=dapL PE=3 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 1.130e-11
Identity = 37/91 (40.66%), Postives = 53/91 (58.24%), Query Frame = 1
Query:  241 IGIRRKIHQNPELGYQEFETSQLIRSELDKM-GIKYKHSVAVTGVVGFI-GTGEPPFVALRADMDSLPLQEMVEWEYKSKIPGKMHACGHD 507
            + IRR +HQ PELG+QEF+T Q I   L  +   + +     TG++  + GT     +  RADMD LP+ E  +  ++S   G+MHACGHD
Sbjct:    3 VNIRRDLHQIPELGFQEFKTQQYILDYLATLPSERLQIKTWRTGILVRVHGTAPTKTIGYRADMDGLPIDEQTDVPFRSTHEGRMHACGHD 93          
BLAST of CN191763 vs. ExPASy Swiss-Prot
Match: DAPL_LEUCK (Putative N-acetyldiaminopimelate deacetylase OS=Leuconostoc citreum (strain KM20) GN=dapL PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.476e-11
Identity = 36/91 (39.56%), Postives = 53/91 (58.24%), Query Frame = 1
Query:  250 RRKIHQNPELGYQEFETSQLIRSEL-----DKMGIKYKHSVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKSKIPGKMHACGHD 507
            RR++HQ PE   +EF+T   + ++L     D M IK   ++    +V F GT     +  R D+D+LP+QE    ++ S+ PGKMHACGHD
Sbjct:   13 RRELHQIPETALEEFKTHDYLLTKLKSWQQDYMTIKTVEALPTAILVYFQGTNPVRTIGYRTDIDALPIQEATGLDFASQHPGKMHACGHD 103          
BLAST of CN191763 vs. ExPASy Swiss-Prot
Match: CAAL4_RHOSR (Carboxylate-amine ligase RHA1_ro04240 OS=Rhodococcus sp. (strain RHA1) GN=RHA1_ro04240 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.476e-11
Identity = 35/96 (36.46%), Postives = 57/96 (59.38%), Query Frame = 1
Query:  220 QELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHSVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKSKIPGKMHACGHD 507
            ++LV W    RR +H +PEL ++E  T+ ++R  L  +G++       TG+   +G      +ALRAD+D+LP+ E     ++S++PG  HACGHD
Sbjct:  419 KKLVEW----RRDLHAHPELSFEERRTTGVVRDHLVGLGLEPVLMPGGTGLWCDVGPETGECIALRADLDALPVAETTGLPFESRVPGVSHACGHD 510          
BLAST of CN191763 vs. ExPASy Swiss-Prot
Match: DAPL_OENOB (Putative N-acetyldiaminopimelate deacetylase OS=Oenococcus oeni (strain BAA-331 / PSU-1) GN=dapL PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.608e-11
Identity = 36/95 (37.89%), Postives = 53/95 (55.79%), Query Frame = 1
Query:  238 MIGIRRKIHQNPELGYQEFETSQLIRSELDK-----MGIKYKHSVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKSKIPGKMHACGHD 507
            +I IRR +H NPE+G QE +T Q +  ++ K     + I+    +    +V   G+     +ALR DMD+LP+QE    ++ SK    MHACGHD
Sbjct:    7 LIKIRRHLHANPEIGMQEVKTHQFLLEQIAKFPQENLTIETISEIPTALLVRIAGSDPKRTIALRTDMDALPIQEETGLDFASKNDHVMHACGHD 101          
BLAST of CN191763 vs. ExPASy Swiss-Prot
Match: DAPL_STRU0 (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=dapL PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 9.566e-11
Identity = 36/95 (37.89%), Postives = 58/95 (61.05%), Query Frame = 1
Query:  238 MIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHSVAV----TGVVGFI-GTGEPPFVALRADMDSLPLQEMVEWEYKSKIPGKMHACGHD 507
            +I IRR++HQ PE+G +E++T   + S ++++  + K  + +    TG++ F+ G      VA R+DMD LP+ E     + SK  G+MHACGHD
Sbjct:    4 LIAIRRQLHQIPEIGLEEYQTQAFLLSVIEQL-CQDKPFIQIKTWKTGILVFLKGYAPEKTVAWRSDMDGLPITEETGLAFASKHQGRMHACGHD 97          
BLAST of CN191763 vs. ExPASy Swiss-Prot
Match: DAPL_LISMO (Putative N-acetyldiaminopimelate deacetylase OS=Listeria monocytogenes GN=dapL PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 9.566e-11
Identity = 35/91 (38.46%), Postives = 51/91 (56.04%), Query Frame = 1
Query:  241 IGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHSVAV-TGVVGFI-GTGEPPFVALRADMDSLPLQEMVEWEYKSKIPGKMHACGHD 507
            I IRR++HQ PE GY+E +T   +   + K+   +       TG++  + GT     +  R D+D+LP+ E  E  + SK PG MHACGHD
Sbjct:    6 IAIRRELHQIPETGYKELKTQAYLLDYISKLPSGHLEVKKWRTGILVLVKGTNPEKTIGYRTDIDALPITEETELPFASKHPGNMHACGHD 96          
The following BLAST results are available for this feature:
BLAST of CN191763 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
DAPL_ANOFW1.130e-1140.66Putative N-acetyldiaminopimelate deacetylase OS=An... [more]
DAPL_LEUCK1.476e-1139.56Putative N-acetyldiaminopimelate deacetylase OS=Le... [more]
CAAL4_RHOSR1.476e-1136.46Carboxylate-amine ligase RHA1_ro04240 OS=Rhodococc... [more]
DAPL_OENOB5.608e-1137.89Putative N-acetyldiaminopimelate deacetylase OS=Oe... [more]
DAPL_STRU09.566e-1137.89Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_LISMO9.566e-1138.46Putative N-acetyldiaminopimelate deacetylase OS=Li... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0005M12_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0005M12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN191763 ID=CN191763; Name=CN191763; organism=Citrus sinensis; type=EST; length=507bp
GATCAACTTCAACGCATAATAGGGTCTGAAGTTGCTTATTCCTCATTTTG
TTCTTGGAAATCGAAACTTATGGGTGGAGCCATGAGTTTCTCGAAGTGGG
TCTTCGTAGTTTTTGTTCTTCATTTGCTCAATCCATGTCCTGTTAGATTC
TCGTATGGCTCTTCAAGCTCAAATGGGTTATCGGATATTCCAAAAAAGTT
GCTTAATTTTGCAAAAAGACAAGAGCTTGTTGGCTGGATGATTGGTATCA
GGAGAAAAATACATCAGAATCCAGAACTGGGCTATCAGGAATTTGAGACT
AGTCAGCTTATTAGATCAGAATTGGATAAAATGGGTATTAAATACAAACA
CTCGGTAGCAGTAACTGGTGTTGTTGGTTTTATTGGGACTGGTGAGCCTC
CTTTTGTTGCATTGAGAGCAGATATGGATTCTCTTCCTCTGCAGGAAATG
GTCGAGTGGGAGTACAAGAGTAAAATTCCTGGGAAAATGCATGCCTGTGG
GCATGAT
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