CN191757

Overview
NameCN191757
Unique NameCN191757
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length593
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5402 contig Csv1_Contig5402:385..977. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN191757 vs. ExPASy Swiss-Prot
Match: GSTF2_ORYSJ (Probable glutathione S-transferase GSTF2 OS=Oryza sativa subsp. japonica GN=GSTF2 PE=1 SV=3)

HSP 1 Score: 86.6557 bits (213), Expect = 9.722e-17
Identity = 47/107 (43.93%), Postives = 63/107 (58.88%), Query Frame = -2
Query:  272 FRPPHHPKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVLALLK 592
            + P  +P L   L+   MFG   D   VEEN  KL K+L+VYEARL++ KYLA D  ++ DL H+     L  TP   + DA PHV AW  D+ +RP+  KV +L+K
Sbjct:  106 YTPALNPILFQCLIRPMMFGAPPDEKVVEENLEKLKKVLEVYEARLTKCKYLAGDYISVADLSHVAGTVCLGATPHASVLDAYPHVKAWWTDLMARPSSQKVASLMK 212          
BLAST of CN191757 vs. ExPASy Swiss-Prot
Match: GSTF3_ARATH (Glutathione S-transferase ERD13 OS=Arabidopsis thaliana GN=ERD13 PE=1 SV=3)

HSP 1 Score: 84.7297 bits (208), Expect = 3.695e-16
Identity = 48/105 (45.71%), Postives = 66/105 (62.86%), Query Frame = -2
Query:  281 HHPKL---NWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKK--LFDARPHVSAWAADITSRPAWAKVLA 580
            +HP L      +V+ P+ G   D   ++E+E KLA++LDVYEA+LS+++YLA D  +L DL HLP    L+G P+ K  L   R HVSAW   I+SR AW +V A
Sbjct:  106 YHPPLLALTLNIVFAPLMGFPADEKVIKESEEKLAEVLDVYEAQLSKNEYLAGDFVSLADLAHLPFTEYLVG-PIGKAHLIKDRKHVSAWWDKISSRAAWKEVSA 209          
BLAST of CN191757 vs. ExPASy Swiss-Prot
Match: GSTF1_ORYSJ (Probable glutathione S-transferase GSTF1 OS=Oryza sativa subsp. japonica GN=GSTF1 PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 4.825e-16
Identity = 43/97 (44.33%), Postives = 61/97 (62.89%), Query Frame = -2
Query:  275 WELVYKP-MFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVLALL 562
            +E +  P M G+ T+   V+E+  KL K+L+VYEARLSQS YLA D  +  DL+H P     +GTP   LFD+ PHV AW   + +RP+  K+ A++
Sbjct:  118 YECIINPAMRGIPTNQKVVDESAEKLKKVLEVYEARLSQSTYLAGDFVSFADLNHFPYTFYFMGTPYASLFDSYPHVKAWWERLMARPSVKKLAAVM 214          
BLAST of CN191757 vs. ExPASy Swiss-Prot
Match: GSTF3_MAIZE (Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE=1 SV=4)

HSP 1 Score: 80.4925 bits (197), Expect = 6.968e-15
Identity = 47/113 (41.59%), Postives = 66/113 (58.41%), Query Frame = -2
Query:  248 PHHPKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKK-LFDARPHVSAWAADITSRPAWAKVLALLKH*TLCPLP 583
            P+   L ++L+ +P+ G   D A VE++  +LAK+LDVYEA L+++KYLA D FTL D +H     L    P +     ARPHV AW   I +RPA+ K +A +      PLP
Sbjct:  109 PNASPLVFQLLVRPLLGGAPDAAVVEKHAEQLAKVLDVYEAHLARNKYLAGDEFTLADANHALLPALTSARPPRPGCVAARPHVKAWWEAIAARPAFQKTVAAI------PLP 215          
BLAST of CN191757 vs. ExPASy Swiss-Prot
Match: GSTF7_ARATH (Glutathione S-transferase OS=Arabidopsis thaliana GN=At3g03190 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 9.100e-15
Identity = 39/94 (41.49%), Postives = 60/94 (63.83%), Query Frame = -2
Query:  278 LVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLG-TPVKKLFDARPHVSAWAADITSRPAWAKVLAL 556
            +V+KP  G   D A VEE + K  K+LDVYE RL+ ++YL  D FTL DL H+P +  ++  T +  L  +R +++ W  +I++RPAW K++ L
Sbjct:  118 VVFKPKSGKPCDVALVEELKVKFDKVLDVYENRLATNRYLGGDEFTLADLSHMPGMRYIMNETSLSGLVTSRENLNRWWNEISARPAWKKLMEL 211          
BLAST of CN191757 vs. ExPASy Swiss-Prot
Match: GSTF4_MAIZE (Glutathione S-transferase 4 OS=Zea mays GN=GST4 PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 8.517e-13
Identity = 40/91 (43.96%), Postives = 52/91 (57.14%), Query Frame = -2
Query:  287 ELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKV 559
            E V+ P  G   + A V+EN  KL K+L+VYEARL+   YLA D  +L DL     ++ L+ T    L  A PHVSAW   + +RPA  KV
Sbjct:  118 ECVFAPFLGRERNQAVVDENVEKLKKVLEVYEARLATCTYLAGDFLSLADLSPFTIMHCLMATEYAALVHALPHVSAWWQGLAARPAANKV 208          
BLAST of CN191757 vs. ExPASy Swiss-Prot
Match: GSTF1_WHEAT (Glutathione S-transferase 1 OS=Triticum aestivum GN=GSTA1 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.740e-11
Identity = 35/86 (40.70%), Postives = 50/86 (58.14%), Query Frame = -2
Query:  287 PMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKV 544
            P  G   +   V+E+  +L  +L +YEARL +S+YLA DS T  DL+H+P     + TP  K+FD  P V AW   + +RPA  +V
Sbjct:  130 PGGGAAPNQTVVDESLERLRGVLGIYEARLEKSRYLAGDSITFADLNHIPFTFYFMTTPYAKVFDDYPKVKAWWEMLMARPAVQRV 215          
BLAST of CN191757 vs. ExPASy Swiss-Prot
Match: GSTF2_WHEAT (Glutathione S-transferase 2 OS=Triticum aestivum GN=GSTA2 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.104e-11
Identity = 34/86 (39.53%), Postives = 50/86 (58.14%), Query Frame = -2
Query:  287 PMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKV 544
            P  G   +   V+E+  +L  +L +YEARL +S+YLA DS +  DL+H+P     + TP  K+FD  P V AW   + +RPA  +V
Sbjct:  130 PGGGAAPNQTVVDESLERLRGVLGIYEARLEKSRYLAGDSISFADLNHIPFTFYFMTTPYAKVFDEYPKVKAWWEMLMARPAVQRV 215          
The following BLAST results are available for this feature:
BLAST of CN191757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
GSTF2_ORYSJ9.722e-1743.93Probable glutathione S-transferase GSTF2 OS=Oryza ... [more]
GSTF3_ARATH3.695e-1645.71Glutathione S-transferase ERD13 OS=Arabidopsis tha... [more]
GSTF1_ORYSJ4.825e-1644.33Probable glutathione S-transferase GSTF1 OS=Oryza ... [more]
GSTF3_MAIZE6.968e-1541.59Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE... [more]
GSTF7_ARATH9.100e-1541.49Glutathione S-transferase OS=Arabidopsis thaliana ... [more]
GSTF4_MAIZE8.517e-1343.96Glutathione S-transferase 4 OS=Zea mays GN=GST4 PE... [more]
GSTF1_WHEAT2.740e-1140.70Glutathione S-transferase 1 OS=Triticum aestivum G... [more]
GSTF2_WHEAT6.104e-1139.53Glutathione S-transferase 2 OS=Triticum aestivum G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0005M08_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0005M08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN191757 ID=CN191757; Name=CN191757; organism=Citrus sinensis; type=EST; length=593bp
GAGGCAGAATATCTCCAGCTTCGTTTTATTAGGGTACATAGATAAAATAA
AAACCTCAAGCCATCAACATCAAAGTTGAATATGAGGCAGTGCTGTTGAA
ATACAAAAGCGGTAGTACAAACTACAAAGCATCAATATTCTGCAGAATAT
TGATGACAAACGCCAAACAAGAGAATACGAACTCGAAAACCAGCCTAATA
GGTATTACAAAAGATAAGTGACCACCGAGGAGCGACTAACGTCTAGTAGG
TAGCGGGCAGAGTGTTCAGTGTTTGAGCAAGGCAAGGACCTTAGCCCAAG
CCGGTCTGGAAGTGATATCAGCTGCCCATGCGCTAACATGGGGGCGTGCA
TCAAACAGCTTCTTGACAGGCGTCCCCAACAACAAATTAATATTGGGGAG
ATGATGCAAATCGACCAAGGTGAAGCTGTCGCACGCCAAGTATTTGGACT
GAGACAAACGGGCCTCGTAAACATCTAAAATTTTGGCAAGCTTAGCTTCA
TTTTCTTCAACCGCAGCTGGATCAGTGGTCATTCCAAACATTGGCTTGTA
CACGAGCTCCCAGTTGAGCTTCGGATGATGGGGGGGTCGAAAC
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