CN191755

Overview
NameCN191755
Unique NameCN191755
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length334
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2287 contig Csv1_Contig2287:159..492. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN191755 vs. ExPASy Swiss-Prot
Match: AATC_DICDI (Aspartate aminotransferase, cytoplasmic OS=Dictyostelium discoideum GN=aatB PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.027e-13
Identity = 31/62 (50.00%), Postives = 44/62 (70.97%), Query Frame = -3
Query:  147 GDWSPIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKSVPHLTDAIHAAVT 332
            G+W  I+ QIGMFT+TGL   QV  +  +YHIY+   GR+S+AGL++K++ +  DAI  AVT
Sbjct:  374 GNWEHIVNQIGMFTYTGLTKPQVDILVNKYHIYLLGSGRVSLAGLNNKNIDYFADAILDAVT 435          
BLAST of CN191755 vs. ExPASy Swiss-Prot
Match: AATC_BOVIN (Aspartate aminotransferase, cytoplasmic OS=Bos taurus GN=GOT1 PE=1 SV=3)

HSP 1 Score: 72.4034 bits (176), Expect = 8.027e-13
Identity = 31/64 (48.44%), Postives = 48/64 (75.00%), Query Frame = -3
Query:  141 GDWSPIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKSVPHLTDAIHAAVTRM 332
            G W+ I +QIGMF+FTGLN +QV ++  E HIY+   GRI+M GL++K++ ++  +IH AVT++
Sbjct:  349 GTWNHITEQIGMFSFTGLNPKQVEYLINEKHIYLLPSGRINMCGLTTKNLEYVATSIHEAVTKI 412          
BLAST of CN191755 vs. ExPASy Swiss-Prot
Match: AATM_BOVIN (Aspartate aminotransferase, mitochondrial OS=Bos taurus GN=GOT2 PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 1.369e-12
Identity = 34/57 (59.65%), Postives = 43/57 (75.44%), Query Frame = -3
Query:  159 DWSPIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKSVPHLTDAIH 329
            +W  II QIGMF +TGL  EQV  +TKE+ IYMT DGRIS+AG++S +V +L  AIH
Sbjct:  370 NWQHIIDQIGMFCYTGLKPEQVERLTKEFSIYMTKDGRISVAGVTSGNVAYLAHAIH 426          
BLAST of CN191755 vs. ExPASy Swiss-Prot
Match: AATC_PIG (Aspartate aminotransferase, cytoplasmic OS=Sus scrofa GN=GOT1 PE=1 SV=3)

HSP 1 Score: 71.633 bits (174), Expect = 1.369e-12
Identity = 31/64 (48.44%), Postives = 47/64 (73.44%), Query Frame = -3
Query:  141 GDWSPIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKSVPHLTDAIHAAVTRM 332
            G W+ I  QIGMF+FTGLN +QV ++  E HIY+   GRI+M GL++K++ ++  +IH AVT++
Sbjct:  349 GTWNHITDQIGMFSFTGLNPKQVEYLINEKHIYLLPSGRINMCGLTTKNLDYVATSIHEAVTKI 412          
BLAST of CN191755 vs. ExPASy Swiss-Prot
Match: AATM_PIG (Aspartate aminotransferase, mitochondrial OS=Sus scrofa GN=GOT2 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 1.788e-12
Identity = 33/57 (57.89%), Postives = 43/57 (75.44%), Query Frame = -3
Query:  159 DWSPIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKSVPHLTDAIH 329
            +W  I+ QIGMF FTG+  EQV  +TKE+ IYMT DGRIS+AG++S +V +L  AIH
Sbjct:  370 NWQHIVDQIGMFCFTGIKPEQVERLTKEFSIYMTKDGRISVAGVTSGNVGYLAHAIH 426          
BLAST of CN191755 vs. ExPASy Swiss-Prot
Match: AATM_CHICK (Aspartate aminotransferase, mitochondrial OS=Gallus gallus GN=GOT2 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 1.788e-12
Identity = 34/57 (59.65%), Postives = 42/57 (73.68%), Query Frame = -3
Query:  159 DWSPIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKSVPHLTDAIH 329
            +W  I  QIGMF FTGL  EQV  +TKE+ IYMT DGRIS+AG++S +V +L  AIH
Sbjct:  363 NWQHITDQIGMFCFTGLKPEQVERLTKEFSIYMTKDGRISVAGVASSNVGYLAHAIH 419          
BLAST of CN191755 vs. ExPASy Swiss-Prot
Match: AATC_HORSE (Aspartate aminotransferase, cytoplasmic OS=Equus caballus GN=GOT1 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 1.788e-12
Identity = 30/63 (47.62%), Postives = 47/63 (74.60%), Query Frame = -3
Query:  144 GDWSPIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKSVPHLTDAIHAAVTR 332
            G W+ I +QIGMF+FTGLN +QV ++  + HIY+   GRI+M GL++K++ ++  +IH AVT+
Sbjct:  349 GTWNHITEQIGMFSFTGLNPKQVEYLVNQKHIYLLPSGRINMCGLTTKNLDYVATSIHEAVTK 411          
BLAST of CN191755 vs. ExPASy Swiss-Prot
Match: AATM_DICDI (Aspartate aminotransferase, mitochondrial OS=Dictyostelium discoideum GN=aatA PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.336e-12
Identity = 36/62 (58.06%), Postives = 46/62 (74.19%), Query Frame = -3
Query:  144 DWSPIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKSVPHLTDAIHAAVTR 329
            DWS I  QIGMF FTGL  EQV  +  EYHIY+T +GRIS+AG++S +V +L  A+ AAVT+
Sbjct:  364 DWSHITTQIGMFCFTGLTPEQVDRLANEYHIYLTRNGRISIAGINSTNVEYLAKAM-AAVTK 424          
BLAST of CN191755 vs. ExPASy Swiss-Prot
Match: AATC_RAT (Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus GN=Got1 PE=1 SV=3)

HSP 1 Score: 70.8626 bits (172), Expect = 2.336e-12
Identity = 31/63 (49.21%), Postives = 47/63 (74.60%), Query Frame = -3
Query:  144 GDWSPIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKSVPHLTDAIHAAVTR 332
            G WS I +QIGMF+FTGLN +QV ++  E HIY+   GRI+M GL++K++ ++  +I+ AVT+
Sbjct:  349 GTWSHITEQIGMFSFTGLNPKQVEYLVNEKHIYLMPSGRINMCGLTTKNLDYVATSINEAVTK 411          
BLAST of CN191755 vs. ExPASy Swiss-Prot
Match: AATC_PANTR (Aspartate aminotransferase, cytoplasmic OS=Pan troglodytes GN=GOT1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.336e-12
Identity = 30/64 (46.88%), Postives = 48/64 (75.00%), Query Frame = -3
Query:  141 GDWSPIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKSVPHLTDAIHAAVTRM 332
            G W+ I  QIGMF+FTGLN +QV ++  E HIY+   GRI+++GL++K++ ++  +IH AVT++
Sbjct:  349 GTWNHITDQIGMFSFTGLNPKQVEYLVNEKHIYLLPSGRINVSGLTTKNLDYVATSIHEAVTKI 412          
The following BLAST results are available for this feature:
BLAST of CN191755 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
AATC_DICDI8.027e-1350.00Aspartate aminotransferase, cytoplasmic OS=Dictyos... [more]
AATC_BOVIN8.027e-1348.44Aspartate aminotransferase, cytoplasmic OS=Bos tau... [more]
AATM_BOVIN1.369e-1259.65Aspartate aminotransferase, mitochondrial OS=Bos t... [more]
AATC_PIG1.369e-1248.44Aspartate aminotransferase, cytoplasmic OS=Sus scr... [more]
AATM_PIG1.788e-1257.89Aspartate aminotransferase, mitochondrial OS=Sus s... [more]
AATM_CHICK1.788e-1259.65Aspartate aminotransferase, mitochondrial OS=Gallu... [more]
AATC_HORSE1.788e-1247.62Aspartate aminotransferase, cytoplasmic OS=Equus c... [more]
AATM_DICDI2.336e-1258.06Aspartate aminotransferase, mitochondrial OS=Dicty... [more]
AATC_RAT2.336e-1249.21Aspartate aminotransferase, cytoplasmic OS=Rattus ... [more]
AATC_PANTR2.336e-1246.88Aspartate aminotransferase, cytoplasmic OS=Pan tro... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0005M07_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0005M07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN191755 ID=CN191755; Name=CN191755; organism=Citrus sinensis; type=EST; length=334bp
ACCGAAACAACAAAATTTTCTTAATGTAAAACCTTTATTTATGCATTTTC
TAGTTCTACAGACTTATTTTTGCATTGCTGAGGGTGACTGAAAACCAAAC
AATTCTTACGGCATGAATTCTTGTCTGATTAATCATAGCCCATTCGGGTT
ACAGCAGCATGTATAGCATCGGTAAGATGAGGAACTGACTTTGAACTAAG
ACCTGCCATGCTAATCCTCCCATCAGATGTCATATAAATGTGATACTCCT
TGGTCATGAAGGCAACTTGCTCACTGTTCAGCCCTGTGAATGTAAACATT
CCTATTTGCTTGATAATGGGACTCCAGTCTCCTG
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