CX301596
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX301596 vs. ExPASy Swiss-Prot
Match: THIO_PORPU (Thioredoxin OS=Porphyra purpurea GN=trxA PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.641e-18 Identity = 41/102 (40.20%), Postives = 67/102 (65.69%), Query Frame = 2 Query: 275 ITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQE-------VPESRREGAITK 559 ++++T++ F V+ ++ PVLV+F A WCGPCR+V+P V+ +A+EY + VVKI+ D NP + EY + +PTL++FK+G+ VP+S E + K Sbjct: 3 VSQVTDASFKQEVINNDLPVLVDFWAPWCGPCRMVSPVVDAIAEEYESSIKVVKINTDDNPTIAAEYGIRSIPTLMIFKSGERVDTVIGAVPKSTLESTLNK 104
BLAST of CX301596 vs. ExPASy Swiss-Prot
Match: THIO_SYNY3 (Thioredoxin OS=Synechocystis sp. (strain PCC 6803) GN=trxA PE=1 SV=3) HSP 1 Score: 91.6633 bits (226), Expect = 4.755e-18 Identity = 44/108 (40.74%), Postives = 67/108 (62.04%), Query Frame = 2 Query: 269 SGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTLL 592 S +++++ F VL SE PVLV+F A WCGPCR+VAP V+ ++Q+Y ++ VVK++ D NP +Y + +PTL++FK GQ V GA+ K L ++ L Sbjct: 2 SATPQVSDASFKEDVLDSELPVLVDFWAPWCGPCRMVAPVVDEISQQYEGKVKVVKLNTDENPNTASQYGIRSIPTLMIFKGGQRV--DMVVGAVPKTTLASTLEKYL 107
BLAST of CX301596 vs. ExPASy Swiss-Prot
Match: THIO_PSEAE (Thioredoxin OS=Pseudomonas aeruginosa GN=trxA PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.210e-18 Identity = 42/106 (39.62%), Postives = 71/106 (66.98%), Query Frame = 2 Query: 266 SSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYID 583 S I +T++ F VLK++ PVLV++ A WCGPC+++AP ++ +A++Y +L V K++ D N +Y V G+PTL+LFK+G E+ + GA++K +L ++D Sbjct: 2 SEHIVNVTDASFEQDVLKADGPVLVDYWAEWCGPCKMIAPVLDEVARDYQGKLKVCKLNIDENQDTPPKYGVRGIPTLMLFKDGN--VEATKVGALSKSQLAAFLD 105
BLAST of CX301596 vs. ExPASy Swiss-Prot
Match: TRXM_ORYSJ (Thioredoxin M-type, chloroplastic OS=Oryza sativa subsp. japonica GN=TRXM PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.110e-18 Identity = 51/139 (36.69%), Postives = 80/139 (57.55%), Query Frame = 2 Query: 191 SRTNLSLKSYNNSLPKLAIRVRCGASSGITEIT---ESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTLLDS 598 S+ LS+ S + P A R C S+ + E+ E + + VL SE PVLVEF A WCGPCR++AP ++ LA+EY ++ K++ D +P + Y + +PT+++FKNG++ + GA+ K L ID + S Sbjct: 38 SKPRLSVASPSPLRP--ASRFACQCSNVVDEVVVADEKNWDSMVLGSEAPVLVEFWAPWCGPCRMIAPVIDELAKEYVGKIKCCKVNTDDSPNIATNYGIRSIPTVLMFKNGEK--KESVIGAVPKTTLATIIDKYVSS 172
BLAST of CX301596 vs. ExPASy Swiss-Prot
Match: THIO_STRAU (Thioredoxin (Fragment) OS=Streptomyces aureofaciens GN=trxA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.059e-17 Identity = 41/104 (39.42%), Postives = 66/104 (63.46%), Query Frame = 2 Query: 281 EITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTLL 592 ++T + F + VL+S++PVLV F WCGPC++VAP ++ +A EY ++ V K++ D NPQL +Y V +PT ++FK G+ + GA K +L ++D L Sbjct: 5 KVTNATFKSDVLESDKPVLVHFEGPWCGPCKMVAPVLDEIANEYEGKVKVAKVNTDENPQLASQYGVRSIPTRLMFKGGEVA--ANMVGAAPKTRLAAFLDASL 106
BLAST of CX301596 vs. ExPASy Swiss-Prot
Match: THIO_CYACA (Thioredoxin OS=Cyanidium caldarium GN=trxA PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.383e-17 Identity = 38/82 (46.34%), Postives = 60/82 (73.17%), Query Frame = 2 Query: 281 EITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEV 526 ++T+ F V+ SE+ VLV+F A WCGPCR+++P ++ LAQEY +++ +VKI+ D NP + EY + +PTL+LFK+G+ V Sbjct: 6 QVTDFSFEKEVVNSEKLVLVDFWAPWCGPCRMISPVIDELAQEYVEQVKIVKINTDENPSISAEYGIRSIPTLMLFKDGKRV 87
BLAST of CX301596 vs. ExPASy Swiss-Prot
Match: TRXM_CHLRE (Thioredoxin M-type, chloroplastic OS=Chlamydomonas reinhardtii GN=TRXM PE=1 SV=3) HSP 1 Score: 89.7373 bits (221), Expect = 1.807e-17 Identity = 44/127 (34.65%), Postives = 77/127 (60.63%), Query Frame = 2 Query: 215 SYNNSLPKLAIRVRCGASSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTLLD 595 ++ + P+ ++ VR A + + + F N VL+S PVLV+F A WCGPCR++AP V+ +A EY D+L VK++ D +P + EY + +PT+++FK G++ GA+ K + + ++ L+ Sbjct: 20 AFARAAPRRSVVVRAEAGA----VNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPNVASEYGIRSIPTIMVFKGGKKC--ETIIGAVPKATIVQTVEKYLN 140
BLAST of CX301596 vs. ExPASy Swiss-Prot
Match: THIO_GRIPA (Thioredoxin OS=Griffithsia pacifica GN=trxA PE=3 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 1.807e-17 Identity = 42/108 (38.89%), Postives = 69/108 (63.89%), Query Frame = 2 Query: 275 ITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTLLDS 598 I+++ ++ F V+ S +PVLV+F A WCGPCR++A ++ +A +Y D+L VVK++ D NP + EY + +PT+++F NG++V GA+ KL L + L S Sbjct: 3 ISQVIDTSFHEEVINSRQPVLVDFWAPWCGPCRMIASTIDEIAHDYKDKLKVVKVNTDQNPTIATEYGIRSIPTVMIFINGKKV--DTVVGAVPKLTLLNTLQKHLKS 108
BLAST of CX301596 vs. ExPASy Swiss-Prot
Match: TRXM_SPIOL (Thioredoxin M-type, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 3.082e-17 Identity = 46/120 (38.33%), Postives = 73/120 (60.83%), Query Frame = 2 Query: 251 VRCGASSGITEI---TESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRRE---GAITKLKLKEYIDTLL 592 V C AS + E+ +S + VL+SE PV+V+F A WCGPC+L+AP ++ LA+EY ++ V K++ D P + +Y + +PT++ FKNG+ R+E GA+ K L + I+ L Sbjct: 65 VVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGE-----RKESIIGAVPKSTLTDSIEKYL 179
BLAST of CX301596 vs. ExPASy Swiss-Prot
Match: THIO_RHOSH (Thioredoxin OS=Rhodobacter sphaeroides GN=trxA PE=1 SV=3) HSP 1 Score: 88.9669 bits (219), Expect = 3.082e-17 Identity = 45/103 (43.69%), Postives = 65/103 (63.11%), Query Frame = 2 Query: 284 ITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTLL 592 +T++ F V KS+ PV+V+F A WCGPCR + PA+E L++EY ++ +VK++ D NP+ V G+P L LFKNGQ V S + GA K L +I + L Sbjct: 6 VTDATFDTEVRKSDVPVVVDFWAEWCGPCRQIGPALEELSKEYAGKVKIVKVNVDENPESPAMLGVRGIPALFLFKNGQVV--SNKVGAAPKAALATWIASAL 106 The following BLAST results are available for this feature:
BLAST of CX301596 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 100
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Sequences
The
following sequences are available for this feature:
EST sequence >CX301596 ID=CX301596; Name=CX301596; organism=Citrus sinensis; type=EST; length=754bpback to top |