CX301596
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX301596 vs. ExPASy Swiss-Prot
Match: THIO_PORYE (Thioredoxin OS=Porphyra yezoensis GN=trxA PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.082e-17 Identity = 37/84 (44.05%), Postives = 59/84 (70.24%), Query Frame = 2 Query: 275 ITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEV 526 ++++T++ F V+ + PVLV+F A WCGPCR+V+P V+ +A+EY + VVKI+ D NP + EY + +PTL++FK G+ V Sbjct: 3 VSQVTDASFKQEVINNNLPVLVDFWAPWCGPCRMVSPVVDEIAEEYESSIKVVKINTDDNPTIAAEYGIRSIPTLMIFKAGERV 86
BLAST of CX301596 vs. ExPASy Swiss-Prot
Match: THIO_CHRVI (Thioredoxin OS=Chromatium vinosum GN=trxA PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.025e-17 Identity = 41/107 (38.32%), Postives = 64/107 (59.81%), Query Frame = 2 Query: 266 SSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDT 586 S I +T+ F V KS PVLV++ A+WCGPC++ AP + +A EY R+ K + D NP Y G+PTL+LF+ G+ E+ + GA++K +L ++D+ Sbjct: 1 SDSIVHVTDDSFEEEVXKSPDPVLVDYWADWCGPCKMXAPVXDEIADEYAGRVKXAKXNXDENPNTPPRYGXRGIPTLMLFRGGE--VEATKVGAVSKSQLTAFLDS 105
BLAST of CX301596 vs. ExPASy Swiss-Prot
Match: THIO_RICPR (Thioredoxin OS=Rickettsia prowazekii GN=trxA PE=3 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 5.257e-17 Identity = 34/83 (40.96%), Postives = 61/83 (73.49%), Query Frame = 2 Query: 275 ITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQE 523 + +T+S F N VL+S+ PV+V+F A WCGPC+++ P ++ +++E D++ V+K++ D NP+ EY + +PT++LFKNG++ Sbjct: 2 VNNVTDSSFKNEVLESDLPVMVDFWAEWCGPCKMLIPIIDEISKELQDKVKVLKMNIDENPKTPSEYGIRSIPTIMLFKNGEQ 84
BLAST of CX301596 vs. ExPASy Swiss-Prot
Match: THIO_STRCO (Thioredoxin OS=Streptomyces coelicolor GN=trxA PE=1 SV=4) HSP 1 Score: 87.8113 bits (216), Expect = 6.866e-17 Identity = 36/82 (43.90%), Postives = 58/82 (70.73%), Query Frame = 2 Query: 275 ITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQ 520 + +T+ F VLK+++PVLV+F A WCGPCR +AP++E +A EYGD++ +VK++ D NP +Y V +PTL +++ G+ Sbjct: 5 LKHVTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPGTAAKYGVMSIPTLNVYQGGE 86
BLAST of CX301596 vs. ExPASy Swiss-Prot
Match: THIO_BUCAP (Thioredoxin OS=Buchnera aphidicola subsp. Schizaphis graminum GN=trxA PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.171e-16 Identity = 43/103 (41.75%), Postives = 71/103 (68.93%), Query Frame = 2 Query: 275 ITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYID 583 I E+T+ F VL+ + VLV+F A WC PC+++AP +E +AQEY +++ V K++ + NP Y + G+P L+LF +G+EV + + GAI+KL+LK+++D Sbjct: 4 IIELTDQNFEKEVLEHKSFVLVDFWAEWCNPCKILAPILEEIAQEYFNKIKVGKLNIEKNPNTAPIYSIRGIPALLLF-HGREV-LATKVGAISKLQLKDFLD 104
BLAST of CX301596 vs. ExPASy Swiss-Prot
Match: THIO_BUCAI (Thioredoxin OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=trxA PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.171e-16 Identity = 39/103 (37.86%), Postives = 68/103 (66.02%), Query Frame = 2 Query: 275 ITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYID 583 I E+T+ F VL S+ LV+F A WC PC+++AP +E +++EY +++ V K++ + NP Y + +PTL+LF N + + + + GA++KL+LKE++D Sbjct: 4 IIELTDQNFEEQVLNSKSFFLVDFWAQWCNPCKILAPILEEISKEYSNKVIVGKLNIEENPNTAPVYSIRSIPTLLLFNNSEVL--ATKVGAVSKLELKEFLD 104
BLAST of CX301596 vs. ExPASy Swiss-Prot
Match: THIO_RICTY (Thioredoxin OS=Rickettsia typhi GN=trxA PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.530e-16 Identity = 38/103 (36.89%), Postives = 69/103 (66.99%), Query Frame = 2 Query: 275 ITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYID 583 + +T+ F N VL+S+ PV+V+F A WCGPC+++ P ++ +++E D++ V+K++ D NP+ EY V +PT++LFKNG++ + + G K L ++I+ Sbjct: 2 VNNVTDISFKNEVLESDLPVIVDFWAEWCGPCKMLIPIIDEISKELQDKVKVLKMNIDENPKTPSEYGVRSIPTIMLFKNGEQ--KDTKIGLQQKKSLLDWIN 102
BLAST of CX301596 vs. ExPASy Swiss-Prot
Match: TRXM_MAIZE (Thioredoxin M-type, chloroplastic OS=Zea mays GN=TRM1 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.407e-16 Identity = 51/153 (33.33%), Postives = 81/153 (52.94%), Query Frame = 2 Query: 170 KNQLLFGSRTNLSLKSYNNSLPKLAIRVR-------CGASSGITEIT---ESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTLLDS 598 K++LL G NL L S P RV C + + + E+ E + V+ E PVLVEF A WCGPCR++AP ++ LA++Y ++T K++ D +P + Y + +PT+++FK G++ + GA+ K L ID + S Sbjct: 19 KDRLLVG---NLVLPSKRALAPLSVGRVATRRPRHVCQSKNAVDEVVVADEKNWDGLVMACETPVLVEFWAPWCGPCRMIAPVIDELAKDYAGKITCCKVNTDDSPNVASTYGIRSIPTVLIFKGGEK--KESVIGAVPKSTLTTLIDKYIGS 166
BLAST of CX301596 vs. ExPASy Swiss-Prot
Match: TRXM3_ARATH (Thioredoxin M-type 3, chloroplastic OS=Arabidopsis thaliana GN=At2g15570 PE=2 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 5.812e-16 Identity = 45/137 (32.85%), Postives = 77/137 (56.20%), Query Frame = 2 Query: 179 LLFGSRTNLSLKSYNNSLPKLAIRVRCGASSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTL 589 L F R +L ++S +L + C S E+T+ + ++VLKSE PVLVEF +WCGPCR+V ++ +A +Y +L ++ D + + EEY++ +P ++LFKNG+ +RE + + + YI + Sbjct: 40 LRFSDRRSL----LSSSASRLRLSPLCVRDSRAAEVTQRSWEDSVLKSETPVLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLNCYLLNADNDLPVAEEYEIKAVPVVLLFKNGE-----KRESIMGTMPKEFYISAI 167
BLAST of CX301596 vs. ExPASy Swiss-Prot
Match: TRXM1_ARATH (Thioredoxin M-type 1, chloroplastic OS=Arabidopsis thaliana GN=At1g03680 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.591e-16 Identity = 49/141 (34.75%), Postives = 82/141 (58.16%), Query Frame = 2 Query: 191 SRTNLSLKSYNNSLPKLAIRVRCGA---SSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTLLDSIS 604 +R +LS S N+ + +L V C A ++GI + +S + + VLK++ PV V+F A WCGPC+++ P V LAQ+Y + K++ D +P +Y V +PT+++F NG++ + GA++K DTL SI+ Sbjct: 45 TRVSLSSLSKNSRVSRLRRGVICEAQDTATGIPVVNDSTWDSLVLKADEPVFVDFWAPWCGPCKMIDPIVNELAQKYAGQFKFYKLNTDESPATPGQYGVRSIPTIMIFVNGEK--KDTIIGAVSK-------DTLATSIN 176 The following BLAST results are available for this feature:
BLAST of CX301596 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 100
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Sequences
The
following sequences are available for this feature:
EST sequence >CX301596 ID=CX301596; Name=CX301596; organism=Citrus sinensis; type=EST; length=754bpback to top |