CX301595

Overview
NameCX301595
Unique NameCX301595
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length706
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL152_ARATH (60S ribosomal protein L15-2 OS=Arabidopsis thaliana GN=RPL15B PE=2 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 2.683e-81
Identity = 145/205 (70.73%), Postives = 166/205 (80.98%), Query Frame = 3 
Query:   39 MGAYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKGHRANNTIGGSHRAAWKRRNTKVFLRYR 653
            MGAYKY+ ELWRKKQSDV+RFL RVR W+YRQ   I R+ +PTRPDKA +LGYKAKQG+VVYR+ VRRGGRKRP  KGIVYGKP NQG+ QLKF R+ RSVAEERAGR    LRV+NSYW+N+D+TYKY+E+ILVDP H A+RNDPRINWI NPVHKHRE RGLTS GKK+RGLR KGH  N+    S RA WK+ N+    RYR
Sbjct:    1 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQQPSIVRLVRPTRPDKARRLGYKAKQGFVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYWLNEDSTYKYYEIILVDPAHNAVRNDPRINWICNPVHKHRELRGLTSEGKKNRGLRGKGHN-NHKNRPSRRATWKKNNSISLRRYR 204
[Close]
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15_NEUCR (60S ribosomal protein L15 OS=Neurospora crassa GN=rpl-15 PE=3 SV=1)

HSP 1 Score: 300.827 bits (769), Expect = 4.577e-81
Identity = 148/205 (72.20%), Postives = 163/205 (79.51%), Query Frame = 3 
Query:   39 MGAYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKGHRANNTIGGSHRAAWKRRNTKVFLRYR 653
            MGA KYLEEL +KKQSDV+RFLLRVR W+ RQ N I R ++P+RPDKA +LGYKAKQGYV+YR  VRRGGRK+P  KG  YGKP NQG+NQLK+ R+L+S AEER GR  ANLRVLNSYWINQD+TYKYFEVILVDP H AIR DPRINWIVNPVHKHRE RGLTS GK+ RGL  KGHR N T  G  R  WKR NT    RYR
Sbjct:    1 MGALKYLEELQKKKQSDVVRFLLRVRCWELRQLNVIHRASRPSRPDKARRLGYKAKQGYVIYRARVRRGGRKKPVPKGATYGKPTNQGVNQLKYQRSLKSTAEERVGRRCANLRVLNSYWINQDSTYKYFEVILVDPQHKAIRRDPRINWIVNPVHKHRESRGLTSTGKRSRGLN-KGHRYNKTRAG-RRKTWKRHNTLSLWRYR 203
[Close]
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15B_YEAST (60S ribosomal protein L15-B OS=Saccharomyces cerevisiae GN=RPL15B PE=1 SV=2)

HSP 1 Score: 299.671 bits (766), Expect = 1.020e-80
Identity = 146/205 (71.22%), Postives = 163/205 (79.51%), Query Frame = 3 
Query:   39 MGAYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKGHRANNTIGGSHRAAWKRRNTKVFLRYR 653
            MGAYKYLEEL RKKQSDVLRFL RVR W+YRQ N I R  +PTRPDKA +LGYKAKQG+V+YR+ VRRG RKRP  KG  YGKP NQG+N+LK+ R+LR+ AEER GR AANLRVLNSYW+NQD+TYKYFEVILVDP H AIR D R NWI NPVHKHRE RGLT+ GKK RG+  KGH+ NNT  G  R  WKR+NT    RYR
Sbjct:    1 MGAYKYLEELERKKQSDVLRFLQRVRVWEYRQKNVIHRAARPTRPDKARRLGYKAKQGFVIYRVRVRRGNRKRPVPKGATYGKPTNQGVNELKYQRSLRATAEERVGRRAANLRVLNSYWVNQDSTYKYFEVILVDPQHKAIRRDARYNWICNPVHKHREARGLTATGKKSRGIN-KGHKFNNTKAG-RRKTWKRQNTLSLWRYR 203
[Close]
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15_MONAL (60S ribosomal protein L15 OS=Monopterus albus GN=rpl15 PE=2 SV=3)

HSP 1 Score: 298.901 bits (764), Expect = 1.739e-80
Identity = 142/205 (69.27%), Postives = 165/205 (80.49%), Query Frame = 3 
Query:   39 MGAYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKGHRANNTIGGSHRAAWKRRNTKVFLRYR 653
            MGAY+Y++ELWRKKQSDV+RFLLRVR WQYRQ + + R  +PTRPDKA +LGYKAKQGYV+YR+ VRRGGRKRP  KG  YGKP + G+NQ+KF R+L+SVAEERAGR    LRVLNSYW+ +D+TYK+FEVIL+DP H AIR +P   WI   VHKHRE RGLTSAGKK RGL  KGH+ + TIGGS RAAWKRRNT    RYR
Sbjct:    1 MGAYRYMQELWRKKQSDVMRFLLRVRCWQYRQLSNLHRAPRPTRPDKARRLGYKAKQGYVIYRVRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKAVHKHREMRGLTSAGKKSRGLG-KGHKFHLTIGGSRRAAWKRRNTLQLHRYR 204
[Close]
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15_ANGJA (60S ribosomal protein L15 OS=Anguilla japonica GN=rpl15 PE=2 SV=3)

HSP 1 Score: 298.516 bits (763), Expect = 2.271e-80
Identity = 142/205 (69.27%), Postives = 164/205 (80.00%), Query Frame = 3 
Query:   39 MGAYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKGHRANNTIGGSHRAAWKRRNTKVFLRYR 653
            MGAYKY++ELWRKKQSDV+RFLLRVR WQYRQ + + R  +PTRPDKA +LGYKAKQGYV+YRI VRRGGRKRP  KG  YGKP + G+NQ+KF R+L+S AEERAGR    LRVLNSYW+ +D+TYK+FEVIL+DP H A+R DP   WI   VHKHRE RGLTSAGKK RGL  KGH+ + TIGGS RAAW+RRNT    RYR
Sbjct:    1 MGAYKYMQELWRKKQSDVMRFLLRVRCWQYRQLSGLHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSTAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAVRRDPDAQWITKAVHKHREMRGLTSAGKKSRGLG-KGHKFHLTIGGSRRAAWRRRNTLQLHRYR 204
[Close]
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15_CTEID (60S ribosomal protein L15 OS=Ctenopharyngodon idella GN=rpl15 PE=2 SV=3)

HSP 1 Score: 298.13 bits (762), Expect = 2.967e-80
Identity = 143/205 (69.76%), Postives = 164/205 (80.00%), Query Frame = 3 
Query:   39 MGAYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKGHRANNTIGGSHRAAWKRRNTKVFLRYR 653
            MGAYKY++ELWRKKQSDV+RFLLRVR WQYRQ + + R  +PTRPDKA +LGYKAKQGYV+YRI VRRGGRKRP  KG  YGKP + G+NQ+KF R+L+SVAEERAGR    LRVLNSYW+ +D+TYK+FEVIL+D  H AIR +P   WI   VHKHRE RGLTSAGKK RGL  KGH+ + TIGGS RAAWKRRNT    RYR
Sbjct:    1 MGAYKYMQELWRKKQSDVMRFLLRVRCWQYRQLSSLHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSVAEERAGRHCGGLRVLNSYWVGEDSTYKFFEVILIDTFHKAIRRNPDTQWITKAVHKHREMRGLTSAGKKSRGLG-KGHKFHLTIGGSRRAAWKRRNTLQLHRYR 204
[Close]
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15A_YEAST (60S ribosomal protein L15-A OS=Saccharomyces cerevisiae GN=RPL15A PE=1 SV=3)

HSP 1 Score: 298.13 bits (762), Expect = 2.967e-80
Identity = 145/205 (70.73%), Postives = 163/205 (79.51%), Query Frame = 3 
Query:   39 MGAYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKGHRANNTIGGSHRAAWKRRNTKVFLRYR 653
            MGAYKYLEEL RKKQSDVLRFL RVR W+YRQ N I R  +PTRPDKA +LGYKAKQG+V+YR+ VRRG RKRP  KG  YGKP NQG+N+LK+ R+LR+ AEER GR AANLRVLNSYW+NQD+TYKYFEVILVDP H AIR D R NWI +PVHKHRE RGLT+ GKK RG+  KGH+ NNT  G  R  WKR+NT    RYR
Sbjct:    1 MGAYKYLEELQRKKQSDVLRFLQRVRVWEYRQKNVIHRAARPTRPDKARRLGYKAKQGFVIYRVRVRRGNRKRPVPKGATYGKPTNQGVNELKYQRSLRATAEERVGRRAANLRVLNSYWVNQDSTYKYFEVILVDPQHKAIRRDARYNWICDPVHKHREARGLTATGKKSRGIN-KGHKFNNTKAG-RRKTWKRQNTLSLWRYR 203
[Close]
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15_SINKN (60S ribosomal protein L15 OS=Siniperca kneri GN=rpl15 PE=2 SV=3)

HSP 1 Score: 297.745 bits (761), Expect = 3.874e-80
Identity = 141/205 (68.78%), Postives = 164/205 (80.00%), Query Frame = 3 
Query:   39 MGAYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKGHRANNTIGGSHRAAWKRRNTKVFLRYR 653
            MGAY+Y++ELWRKKQSDV+RFLLRVR WQYRQ + + R  +PTRPDKA +LGYKAKQGYVVYR+ VRRGGRKRP  KG  YGKP + G+NQ+KF R+L+S AEERAGR    LRVLNSYW+ +D+TYK+FEVIL+DP H A+R +P   WI   VHKHRE RGLTSAGKK RGL  KGH+ + TIGGS RAAWKRRNT    RYR
Sbjct:    1 MGAYRYMQELWRKKQSDVMRFLLRVRCWQYRQLSNLHRAPRPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSTAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAVRRNPDTQWITKAVHKHREMRGLTSAGKKSRGLG-KGHKFHLTIGGSRRAAWKRRNTLQLRRYR 204
[Close]
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15_CYPCA (60S ribosomal protein L15 OS=Cyprinus carpio GN=rpl15 PE=2 SV=3)

HSP 1 Score: 297.36 bits (760), Expect = 5.060e-80
Identity = 142/205 (69.27%), Postives = 164/205 (80.00%), Query Frame = 3 
Query:   39 MGAYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKGHRANNTIGGSHRAAWKRRNTKVFLRYR 653
            MGAYKY++ELWRKKQSDV+RFLLRVR WQYRQ + + R  +PTRPDKA +LGYKAKQGYV+YRI VRRGGRKRP  KG  YGKP + G+NQ+KF R+L+SVAEERAGR    LRVL+SYW+ +D+TYK+FEV+L+D  H AIR DP   WI   VHKHRE RGLTSAGKK RGL  KGH+ + TIGGS RAAWKRRNT    RYR
Sbjct:    1 MGAYKYMQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSVAEERAGRHCGGLRVLSSYWVGEDSTYKFFEVVLIDTFHKAIRRDPDTQWITKAVHKHREMRGLTSAGKKSRGLG-KGHKFHLTIGGSRRAAWKRRNTLQLHRYR 204
[Close]
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15_ASPNG (60S ribosomal protein L15 OS=Aspergillus niger GN=rpl15 PE=2 SV=1)

HSP 1 Score: 296.59 bits (758), Expect = 8.631e-80
Identity = 146/205 (71.22%), Postives = 163/205 (79.51%), Query Frame = 3 
Query:   39 MGAYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKGHRANNTIGGSHRAAWKRRNTKVFLRYR 653
            MGA KY+EE+ +KKQSDV+RFLLRVR W+ RQ N I R ++P+RPDKA +LGYKAKQGYVVYRI VRRGGRKRP  KG  YGKP N GINQLK+ R LR+ AEER GR  ANLRVLNSYWINQD+TYKYFEVILVDP H AIR D RINWI N VHKHRE RGLT+ GKK RG+  KGHR NNT  G  R  WKR+NT+ + RYR
Sbjct:    1 MGALKYVEEIQKKKQSDVIRFLLRVRCWELRQLNAIHRASRPSRPDKARRLGYKAKQGYVVYRIRVRRGGRKRPAPKGATYGKPTNMGINQLKYQRALRATAEERVGRRCANLRVLNSYWINQDSTYKYFEVILVDPQHKAIRRDARINWICNAVHKHREARGLTATGKKSRGIN-KGHRYNNTRSG-RRHTWKRQNTQSYWRYR 203
The following BLAST results are available for this feature:
BLAST of CX301595 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
RL152_ARATH2.683e-8170.7360S ribosomal protein L15-2 OS=Arabidopsis thalian... [more]
RL15_NEUCR4.577e-8172.2060S ribosomal protein L15 OS=Neurospora crassa GN=... [more]
RL15B_YEAST1.020e-8071.2260S ribosomal protein L15-B OS=Saccharomyces cerev... [more]
RL15_MONAL1.739e-8069.2760S ribosomal protein L15 OS=Monopterus albus GN=r... [more]
RL15_ANGJA2.271e-8069.2760S ribosomal protein L15 OS=Anguilla japonica GN=... [more]
RL15_CTEID2.967e-8069.7660S ribosomal protein L15 OS=Ctenopharyngodon idel... [more]
RL15A_YEAST2.967e-8070.7360S ribosomal protein L15-A OS=Saccharomyces cerev... [more]
RL15_SINKN3.874e-8068.7860S ribosomal protein L15 OS=Siniperca kneri GN=rp... [more]
RL15_CYPCA5.060e-8069.2760S ribosomal protein L15 OS=Cyprinus carpio GN=rp... [more]
RL15_ASPNG8.631e-8071.2260S ribosomal protein L15 OS=Aspergillus niger GN=... [more]

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Properties
Property NameValue
Genbank descriptionC08011E01SK PhyRootSw1 Citrus sinensis cDNA clone C08011E01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX301595 ID=CX301595; Name=CX301595; organism=Citrus sinensis; type=EST; length=706bp
AATTCGGCACGAGGTTAATATCGATTAATTAAACAAAAATGGGAGCATAC
AAGTACCTCGAAGAGCTCTGGAGAAAGAAGCAATCTGATGTGCTTCGTTT
CTTGTTACGTGTTCGTGCTTGGCAATATCGTCAAACCAACAAGATCCAAC
GTGTCAACAAGCCAACTCGCCCAGACAAGGCTCACAAGTTAGGATACAAG
GCCAAGCAAGGATATGTTGTCTACCGTATCGCTGTCCGTCGTGGTGGCCG
CAAGAGACCAAACCACAAGGGTATTGTCTACGGTAAACCAAAGAACCAAG
GTATCAACCAGTTAAAGTTCGTCCGCAACTTACGCAGTGTTGCCGAGGAA
CGTGCTGGTCGTGTTGCTGCCAACTTACGTGTGTTGAACTCTTACTGGAT
CAACCAAGATGCCACCTACAAGTACTTCGAGGTCATCTTAGTCGATCCTA
ACCACGTTGCCATCAGAAACGATCCTCGCATCAACTGGATCGTTAACCCT
GTTCACAAGCACCGCGAACGCCGTGGACTTACCTCCGCTGGCAAGAAGCA
CCGCGGTCTCAGAGTCAAGGGTCACAGAGCCAACAACACCATCGGTGGTT
CCCACAGAGCTGCCTGGAAGCGCCGCAACACCAAGGTCTTCCTCAGATAC
CGTTAATCAACTTCTTCACCTCCTCCATAATGCACTTAGCGTTGTTATTC
CTCGCT
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