CX301595

Overview
NameCX301595
Unique NameCX301595
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length706
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15_MYLPI (60S ribosomal protein L15 OS=Mylopharyngodon piceus GN=rpl15 PE=2 SV=3)

HSP 1 Score: 296.204 bits (757), Expect = 1.127e-79
Identity = 142/205 (69.27%), Postives = 164/205 (80.00%), Query Frame = 3 
Query:   39 MGAYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKGHRANNTIGGSHRAAWKRRNTKVFLRYR 653
            MGAYKY++ELWRKKQSDV+RFLLRVR WQYRQ + + R  +PTRPDKA +LGYKAKQGYV+YRI VRRGGRKRP  KG  YGKP + G+NQ+KF R+L+SVAEERAGR    LRVLNSYW+ +D+TYK+FEVIL+D  H AIR +P   WI   VHKHRE RGLTSAGKK RGL  KGH+ + TIGGS RAAWKRR+T    RYR
Sbjct:    1 MGAYKYMQELWRKKQSDVMRFLLRVRCWQYRQLSSLHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSVAEERAGRHCGGLRVLNSYWVGEDSTYKFFEVILIDTFHKAIRRNPDTQWITKAVHKHREMRGLTSAGKKSRGLG-KGHKFHLTIGGSRRAAWKRRDTLQLHRYR 204
[Close]
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15_HYPNO (60S ribosomal protein L15 OS=Hypophthalmichthys nobilis GN=rpl15 PE=2 SV=3)

HSP 1 Score: 296.204 bits (757), Expect = 1.127e-79
Identity = 142/205 (69.27%), Postives = 164/205 (80.00%), Query Frame = 3 
Query:   39 MGAYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKGHRANNTIGGSHRAAWKRRNTKVFLRYR 653
            MGAYKY++ELWRKKQS+V+RFLLRVR WQYRQ + + R  +PTRPDKA +LGYKAKQGYV+YRI VRRGGRKRP  KG  YGKP + G+NQ+KF R+L+SVAEERAGR    LRVLNSYW+ +D+TYK+FEVIL+D  H AIR +P   WI   VHKHRE RGLTSAGKK RGL  KGH+ + TIGGS RAAWKRRNT    RYR
Sbjct:    1 MGAYKYMQELWRKKQSNVMRFLLRVRCWQYRQLSSLHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSVAEERAGRHCGGLRVLNSYWVGEDSTYKFFEVILIDTFHKAIRRNPDTQWITKAVHKHREMRGLTSAGKKSRGLG-KGHKFHLTIGGSRRAAWKRRNTLQLHRYR 204
[Close]
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15_HYDAT (60S ribosomal protein L15 OS=Hydra attenuata GN=RPL15 PE=2 SV=2)

HSP 1 Score: 295.819 bits (756), Expect = 1.472e-79
Identity = 142/205 (69.27%), Postives = 164/205 (80.00%), Query Frame = 3 
Query:   39 MGAYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKGHRANNTIGGSHRAAWKRRNTKVFLRYR 653
            MGAYKY++ELWRKKQSDV+RFLLRVR WQYRQ + + R  +PTRPDKA +LGYKAKQGYV+YRI VRRGGRKRP  KG  YGKP + G+NQ+KF R+L+SVAEERAGR    LRVL+SYW+ +D+TYK+FEV+LVD  H AIR +P   WI   VHKHRE RGLTSAGKK RGL  KGH+ + TIGGS RAAWKRRNT    RYR
Sbjct:    1 MGAYKYMQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSVAEERAGRHCGGLRVLSSYWVGEDSTYKFFEVVLVDTFHKAIRRNPDTQWITKAVHKHREMRGLTSAGKKSRGLG-KGHKFHLTIGGSRRAAWKRRNTLQLHRYR 204
[Close]
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15_CARAU (60S ribosomal protein L15 OS=Carassius auratus GN=rpl15 PE=2 SV=3)

HSP 1 Score: 295.819 bits (756), Expect = 1.472e-79
Identity = 142/205 (69.27%), Postives = 164/205 (80.00%), Query Frame = 3 
Query:   39 MGAYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKGHRANNTIGGSHRAAWKRRNTKVFLRYR 653
            MGAYKY++ELWRKKQSDV+RFLLRVR WQYRQ + + R  +PTRPDKA +LGYKAKQGYV+YRI VRRGGRKRP  KG  YGKP + G+NQ+KF R+L+SVAEERAGR    LRVL+SYW+ +D+TYK+FEV+LVD  H AIR +P   WI   VHKHRE RGLTSAGKK RGL  KGH+ + TIGGS RAAWKRRNT    RYR
Sbjct:    1 MGAYKYMQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSVAEERAGRHCGGLRVLSSYWVGEDSTYKFFEVVLVDTFHKAIRRNPDTQWITKAVHKHREMRGLTSAGKKSRGLG-KGHKFHLTIGGSRRAAWKRRNTLQLHRYR 204
[Close]
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15_ICTPU (60S ribosomal protein L15 OS=Ictalurus punctatus GN=rpl15 PE=2 SV=3)

HSP 1 Score: 295.434 bits (755), Expect = 1.923e-79
Identity = 141/205 (68.78%), Postives = 163/205 (79.51%), Query Frame = 3 
Query:   39 MGAYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKGHRANNTIGGSHRAAWKRRNTKVFLRYR 653
            MGAYKY++ELWRKKQSDV+RFLLRVR WQYRQ + + R  +PTRPDKA +LGYKAKQGYV+YR+ VRRGGRKRP  KG  YGKP + G+NQLKF R+L+SVAEERAGR    LRVLNSYW+ +D+TYK+FEVIL+D  H AIR +P   WI   VHKHRE RGLTSAGKK RGL  KGH+ + TIGGS RA W+RRNT    RYR
Sbjct:    1 MGAYKYMQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRVRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGGLRVLNSYWVGEDSTYKFFEVILIDTFHKAIRRNPDTQWITKAVHKHREMRGLTSAGKKSRGLG-KGHKFHLTIGGSRRAPWRRRNTLQLRRYR 204
[Close]
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15_EPICO (60S ribosomal protein L15 OS=Epinephelus coioides GN=rpl15 PE=2 SV=2)

HSP 1 Score: 295.049 bits (754), Expect = 2.511e-79
Identity = 142/205 (69.27%), Postives = 163/205 (79.51%), Query Frame = 3 
Query:   39 MGAYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKGHRANNTIGGSHRAAWKRRNTKVFLRYR 653
            MGAY+Y++ELWRKKQSDV+RFLLRVR WQYRQ + + R  +PTRPDKA +LGYKAKQGYVVYR+ VRRGGRKRP  KG  YGKP + G+NQ+KF R+L+S AEERAGR    LRVLNSYW+ +D+TYK+FEVILVD  H AIR +P   WI   VHKHRE RGLTSAGKK RGL  KGH+ + TIGGS RAAWKRRNT    RYR
Sbjct:    1 MGAYRYMQELWRKKQSDVMRFLLRVRCWQYRQLSNLHRAPRPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSTAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILVDTFHKAIRRNPDTQWITKAVHKHREMRGLTSAGKKSRGLG-KGHKFHLTIGGSRRAAWKRRNTLQLHRYR 204
[Close]
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15_MEGAM (60S ribosomal protein L15 OS=Megalobrama amblycephala GN=rpl15 PE=2 SV=3)

HSP 1 Score: 294.664 bits (753), Expect = 3.280e-79
Identity = 141/205 (68.78%), Postives = 164/205 (80.00%), Query Frame = 3 
Query:   39 MGAYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKGHRANNTIGGSHRAAWKRRNTKVFLRYR 653
            MGAYKY+++LWRKKQS+V+RFLLRVR WQYRQ + + R  +PTRPDKA +LGYKAKQGYV+YRI VRRGGRKRP  KG  YGKP + G+NQ+KF R+L+SVAEERAGR    LRVLNSYW+ +D+TYK+FEVIL+D  H AIR +P   WI   VHKHRE RGLTSAGKK RGL  KGH+ + TIGGS RAAWKRRNT    RYR
Sbjct:    1 MGAYKYMQKLWRKKQSNVMRFLLRVRCWQYRQLSSLHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSVAEERAGRHCGGLRVLNSYWVGEDSTYKFFEVILIDTFHKAIRRNPDTQWITKAVHKHREMRGLTSAGKKSRGLG-KGHKFHLTIGGSRRAAWKRRNTLQLHRYR 204
[Close]
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15_SILAS (60S ribosomal protein L15 OS=Silurus asotus GN=rpl15 PE=2 SV=2)

HSP 1 Score: 294.278 bits (752), Expect = 4.284e-79
Identity = 140/205 (68.29%), Postives = 164/205 (80.00%), Query Frame = 3 
Query:   39 MGAYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKGHRANNTIGGSHRAAWKRRNTKVFLRYR 653
            MGAYKY++ELWRKKQSDV+RFLLRVR WQYRQ + + R  + TRPDKA +LGYKAKQGYV+YR+ VRRGGRKRP  KG  YGKP + G+NQLKF R+L+S+AEERAGR    LRVLNSYW+ +D+TYK+FEVIL+D  H AIR +P + WI   VHKHRE RGLTSAGKK RGL  KGH+ + TIGGS RAAW+RRNT    RYR
Sbjct:    1 MGAYKYMQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRATRPDKARRLGYKAKQGYVIYRVRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSIAEERAGRHCGGLRVLNSYWVGEDSTYKFFEVILIDTFHKAIRRNPDMQWITKAVHKHREMRGLTSAGKKSRGLG-KGHKFHLTIGGSRRAAWRRRNTLQLHRYR 204
[Close]
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15_PARDA (60S ribosomal protein L15 OS=Paramisgurnus dabryanus GN=rpl15 PE=2 SV=3)

HSP 1 Score: 294.278 bits (752), Expect = 4.284e-79
Identity = 142/205 (69.27%), Postives = 163/205 (79.51%), Query Frame = 3 
Query:   39 MGAYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKGHRANNTIGGSHRAAWKRRNTKVFLRYR 653
            MGAYKY++ELWRKKQSDV+RFLLRVR WQYRQ + + R  KPTRPDKA +LGYKAKQGYV+YRI VRRGGRKRP  KG  YGKP + G+NQ+KF R+L+S AEERAGR    LRVL+SYW+ +D+TYK+FEVILVD  H AIR +P   WI   VHKHRE RGLTSAGKK RGL  KGH+ + TIGGS RAAW+RRNT    RYR
Sbjct:    1 MGAYKYMQELWRKKQSDVMRFLLRVRCWQYRQLSSLHRTPKPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSTAEERAGRHCGGLRVLSSYWVGEDSTYKFFEVILVDIFHKAIRRNPDTQWITKAVHKHREMRGLTSAGKKSRGLG-KGHKFHLTIGGSRRAAWRRRNTLQLHRYR 204
[Close]
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15_SILME (60S ribosomal protein L15 OS=Silurus meridionalis GN=rpl15 PE=2 SV=3)

HSP 1 Score: 293.893 bits (751), Expect = 5.595e-79
Identity = 140/205 (68.29%), Postives = 164/205 (80.00%), Query Frame = 3 
Query:   39 MGAYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKGHRANNTIGGSHRAAWKRRNTKVFLRYR 653
            MGA KY++ELWRKKQSDV+RFLLRVR WQYRQ + + R  +PTRPDKA +LGYKAKQGYV+YR+ VRRGGRKRP  KG  YGKP + G+NQLKF R+L+S+AEERAGR    LRVLNSYW+ +D+TYK+FEVIL+D  H AIR +P + WI   VHKHRE RGLTSAGKK RGL  KGH+ + TIGGS RAAW+RRNT    RYR
Sbjct:    1 MGASKYMQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRVRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSIAEERAGRHCGGLRVLNSYWVGEDSTYKFFEVILIDTFHKAIRRNPDMQWITKAVHKHREMRGLTSAGKKSRGLG-KGHKFHLTIGGSRRAAWRRRNTLQLHRYR 204
The following BLAST results are available for this feature:
BLAST of CX301595 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
RL15_MYLPI1.127e-7969.2760S ribosomal protein L15 OS=Mylopharyngodon piceu... [more]
RL15_HYPNO1.127e-7969.2760S ribosomal protein L15 OS=Hypophthalmichthys no... [more]
RL15_HYDAT1.472e-7969.2760S ribosomal protein L15 OS=Hydra attenuata GN=RP... [more]
RL15_CARAU1.472e-7969.2760S ribosomal protein L15 OS=Carassius auratus GN=... [more]
RL15_ICTPU1.923e-7968.7860S ribosomal protein L15 OS=Ictalurus punctatus G... [more]
RL15_EPICO2.511e-7969.2760S ribosomal protein L15 OS=Epinephelus coioides ... [more]
RL15_MEGAM3.280e-7968.7860S ribosomal protein L15 OS=Megalobrama amblyceph... [more]
RL15_SILAS4.284e-7968.2960S ribosomal protein L15 OS=Silurus asotus GN=rpl... [more]
RL15_PARDA4.284e-7969.2760S ribosomal protein L15 OS=Paramisgurnus dabryan... [more]
RL15_SILME5.595e-7968.2960S ribosomal protein L15 OS=Silurus meridionalis ... [more]

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Properties
Property NameValue
Genbank descriptionC08011E01SK PhyRootSw1 Citrus sinensis cDNA clone C08011E01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX301595 ID=CX301595; Name=CX301595; organism=Citrus sinensis; type=EST; length=706bp
AATTCGGCACGAGGTTAATATCGATTAATTAAACAAAAATGGGAGCATAC
AAGTACCTCGAAGAGCTCTGGAGAAAGAAGCAATCTGATGTGCTTCGTTT
CTTGTTACGTGTTCGTGCTTGGCAATATCGTCAAACCAACAAGATCCAAC
GTGTCAACAAGCCAACTCGCCCAGACAAGGCTCACAAGTTAGGATACAAG
GCCAAGCAAGGATATGTTGTCTACCGTATCGCTGTCCGTCGTGGTGGCCG
CAAGAGACCAAACCACAAGGGTATTGTCTACGGTAAACCAAAGAACCAAG
GTATCAACCAGTTAAAGTTCGTCCGCAACTTACGCAGTGTTGCCGAGGAA
CGTGCTGGTCGTGTTGCTGCCAACTTACGTGTGTTGAACTCTTACTGGAT
CAACCAAGATGCCACCTACAAGTACTTCGAGGTCATCTTAGTCGATCCTA
ACCACGTTGCCATCAGAAACGATCCTCGCATCAACTGGATCGTTAACCCT
GTTCACAAGCACCGCGAACGCCGTGGACTTACCTCCGCTGGCAAGAAGCA
CCGCGGTCTCAGAGTCAAGGGTCACAGAGCCAACAACACCATCGGTGGTT
CCCACAGAGCTGCCTGGAAGCGCCGCAACACCAAGGTCTTCCTCAGATAC
CGTTAATCAACTTCTTCACCTCCTCCATAATGCACTTAGCGTTGTTATTC
CTCGCT
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