CX301595
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15E_METJA (50S ribosomal protein L15e OS=Methanocaldococcus jannaschii GN=rpl15e PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 9.968e-44 Identity = 85/178 (47.75%), Postives = 119/178 (66.85%), Query Frame = 3 Query: 39 MGAYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKG 572 MG YKY+ E W++ + +R LL R Q+R+ + R+ +PTR D+A LGYK KQG +V R+ VRRGG ++P K KP G+N++ ++++ +AEERA R N+ VLNSYW+ +D +K++EVILVDP H AI+ DP++NW+ H+ R RGLTSAGKK RGLR KG Sbjct: 1 MGIYKYIREAWKRPKESYVRQLLWERLQQWRREPAVVRIERPTRLDRARALGYKPKQGIIVVRVRVRRGGLRKPRPKNSK--KPATLGVNKITMGKSIQRIAEERAARKYPNMEVLNSYWVGEDGKHKWYEVILVDPYHPAIKADPQLNWLCTGKHRGRAFRGLTSAGKKGRGLRNKG 176
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15E_STAMF (50S ribosomal protein L15e OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rpl15e PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 7.143e-42 Identity = 96/206 (46.60%), Postives = 129/206 (62.62%), Query Frame = 3 Query: 42 GAYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGG--RKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKGHRANNTIGGSHRAAWKRRNTKVFLRYR 653 G Y Y+ +LW++ + L+R R ++R+ I R+ KPTR D+A LGYKAKQG+++ R+ VR+GG ++RPN KG +PK GI ++LR +AEERA R NL VLNSY++ +D YK++EVILVDP+H AI NDP I WI H+ R RGLTSAGKK RGLR K TI + WKR+ + L+ R Sbjct: 4 GMYHYIAQLWKRPYEGDMLTLMRQRLIKWRREPAIIRIEKPTRLDRARALGYKAKQGFIIVRVRVRKGGLRKQRPN-KG---RRPKRMGIYGFAPSKSLRLIAEERAARKYPNLEVLNSYYVGEDGNYKWYEVILVDPHHPAICNDPDIKWICEKQHRRRVFRGLTSAGKKMRGLR-KSRGLKYTI----KYKWKRKQKERLLKKR 200
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15E_HALLT (50S ribosomal protein L15e OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=rpl15e PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 3.545e-41 Identity = 85/181 (46.96%), Postives = 116/181 (64.09%), Query Frame = 3 Query: 48 YKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKGHRANNT 590 Y +++E WR + L L R ++R I+R+ +PTR DKA +LGYKAKQG VV R++VR+GG ++ HK + K QG+N+L ++++ ++EERA R NLRVLNSYW+ +D + K+ EVILVDPNH AI ND + WI + HK R RGLTSAG K RG R +G T Sbjct: 6 YSHIKEAWRSPKEGKLAELQWQRKQEWRDEGAIERIERPTRLDKARELGYKAKQGVVVARVSVRKGGSRKQRHKA--GRRSKRQGVNRLSRRKSIQRISEERASRKYRNLRVLNSYWVGEDGSQKWHEVILVDPNHPAIENDGDLGWIASDDHKGRAFRGLTSAGTKGRGQRTRGTGTEKT 184
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15E_METST (50S ribosomal protein L15e OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rpl15e PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.298e-40 Identity = 86/179 (48.04%), Postives = 118/179 (65.92%), Query Frame = 3 Query: 48 YKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPNHKGIVYGK-PKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKGHRA 581 YKY++E W+ ++ L+R R ++R+ I R++KPTR D+A +LGYKAK GYVV RI VRRG R++ K G+ PK G+N++ ++++ +AEER R NL VLNSYW+ +D KY+EVILVDP +I++D +INWI + H R RGLTSAGKK RGL KG A Sbjct: 7 YKYMKEAWKNPDESYVKELMRERLPKWRRQPVIIRIDKPTRIDRARRLGYKAKTGYVVARIRVRRGSRRKSRFKN---GRDPKRMGVNKISGEKSIQRMAEERVARKYPNLEVLNSYWVWEDGKAKYYEVILVDPQCPSIQHDNKINWICSKKHTRRAFRGLTSAGKKGRGLNKKGKGA 182
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15E_METM5 (50S ribosomal protein L15e OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rpl15e PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 5.119e-40 Identity = 82/181 (45.30%), Postives = 113/181 (62.43%), Query Frame = 3 Query: 39 MGAYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKGHRA 581 M Y Y++E W+ + ++ L R +R+ + R+ +PTR D+A LGYKAKQG VV R++VRRGG ++P K KP GIN++ ++++ +AEERA + N+ VLNSYW+ QD K++EVILVDP +I+ND NW+ HK R RGLTSAGKK RGL KG A Sbjct: 1 MSMYNYVKEAWKVPANSYVKELQWARMQDWRKEPSVIRIERPTRIDRARNLGYKAKQGIVVVRVSVRRGGLRKPRPKHSK--KPATMGINKITMAKSIQRIAEERAAKKYPNMEVLNSYWVGQDGKQKWYEVILVDPCQPSIKNDKSYNWLCKGTHKGRVTRGLTSAGKKGRGLMYKGKGA 179
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15E_METTH (50S ribosomal protein L15e OS=Methanobacterium thermoautotrophicum GN=rpl15e PE=3 SV=3) HSP 1 Score: 164.081 bits (414), Expect = 6.686e-40 Identity = 78/178 (43.82%), Postives = 118/178 (66.29%), Query Frame = 3 Query: 48 YKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKGHRA 581 Y+Y+++ W+ + +R L+ RA ++R+ I+R+ +PTR D+A LGY+AK GY+V R VRRG +++ K +P G+ ++ ++++ +AEER R N+ VLNSYW+ +D YK++EVILVDPNH+AI+NDP+I WI H+ R RGL S GKK+RGLR +G A Sbjct: 3 YRYVKDAWKNPKDSYVRELMWERAPKWRRDPVIKRIERPTRIDRARALGYRAKPGYIVVRTRVRRGSQRKTRFKA--GRRPTRMGVKKITTAKSIKRIAEERVARKYPNMEVLNSYWVWEDGKYKFYEVILVDPNHLAIKNDPKIYWICVKQHRGRVFRGLISEGKKNRGLRNRGKGA 178
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15E_METMP (50S ribosomal protein L15e OS=Methanococcus maripaludis GN=rpl15e PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 6.686e-40 Identity = 82/187 (43.85%), Postives = 115/187 (61.50%), Query Frame = 3 Query: 39 MGAYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKGHRANNTIGG 599 M Y Y++E W+ + ++ L R +R+ + R+ +PTR D+A LGYKAKQG VV R++VRRGG ++P K KP GIN++ ++++ +AEERA + N+ VLNSYW+ QD K++E+ILVDP H +I+ND +W+ HK R RGLTSAGKK RGL KG A G Sbjct: 1 MSMYNYVKEAWKVPANSYVKELQWARMQDWRKEPSVLRIERPTRIDRARNLGYKAKQGIVVVRVSVRRGGLRKPRPKHSK--KPATLGINKITMAKSIQRIAEERAAKRYPNMEVLNSYWVGQDGKQKWYEIILVDPCHPSIKNDKSYSWLSTGNHKGRANRGLTSAGKKGRGLMYKGKGAEKARPG 185
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15E_METM6 (50S ribosomal protein L15e OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rpl15e PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.489e-39 Identity = 83/181 (45.86%), Postives = 113/181 (62.43%), Query Frame = 3 Query: 39 MGAYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKGHRA 581 M Y Y++E W+ + ++ L R +R+ + RV +PTR D+A LGYKAKQG VV R++VRRGG ++P K KP GIN++ ++++ +AEERA + NL VLNSYW+ QD K++EVILVD H +I++D NW+ HK R RGLTSAGKK RGL KG A Sbjct: 1 MSMYNYVKEAWKVPANSYVKELQWSRMQDWRKEPSVIRVERPTRIDRARNLGYKAKQGIVVVRVSVRRGGLRKPRPKHSK--KPSTLGINKITMAKSIQRIAEERAAKKYPNLEVLNSYWVGQDGKQKWYEVILVDSCHPSIKSDKSYNWLCKGTHKGRATRGLTSAGKKGRGLMYKGKGA 179
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15E_METM7 (50S ribosomal protein L15e OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rpl15e PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.945e-39 Identity = 82/178 (46.07%), Postives = 112/178 (62.92%), Query Frame = 3 Query: 39 MGAYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKG 572 M Y Y++E W+ + ++ L R +R+ + RV +PTR D+A LGYKAKQG VV R++VRRGG ++P K KP GIN++ ++++ +AEERA + NL VLNSYW+ QD K++EVILVD H +I++D NW+ HK R RGLTSAGKK RGL KG Sbjct: 1 MSMYNYVKEAWKVPANSYVKELQWSRMQDWRKEPSVIRVERPTRIDRARNLGYKAKQGIVVVRVSVRRGGLRKPRPKHSK--KPSTLGINKITMAKSIQRIAEERAAKKYPNLEVLNSYWVGQDGKQKWYEVILVDSCHPSIKSDKSYNWLCKGTHKGRATRGLTSAGKKGRGLMYKG 176
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15E_DESK1 (50S ribosomal protein L15e OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=rpl15e PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.541e-39 Identity = 85/193 (44.04%), Postives = 122/193 (63.21%), Query Frame = 3 Query: 48 YKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKGHRANNTIGGSHRAAWKRR 626 Y Y+ E W++K + L L+R R ++R+ + R+ KPTR DKA LGYKAK G+++ R+ VR+GG+++P +PK G+ ++LR +AEERA R L VLNSY++ +D YK++EVILVDP+H +I NDP +NWI P ++ R RGLTSAGKK RGL R + + G+ WKR+ Sbjct: 6 YHYIAEAWKEKSRE-LEALIRQRLIEWRREPSVVRLEKPTRLDKARALGYKAKVGFIIVRVRVRKGGQRKPRPDS--GRRPKRMGVYGYAPAKSLRLIAEERAARKFPGLEVLNSYYVAEDGRYKWYEVILVDPHHPSICNDPDVNWICEPQNRGRVFRGLTSAGKKMRGL-----RKSRGLRGTVYYKWKRK 190 The following BLAST results are available for this feature:
BLAST of CX301595 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 93
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Sequences
The
following sequences are available for this feature:
EST sequence >CX301595 ID=CX301595; Name=CX301595; organism=Citrus sinensis; type=EST; length=706bpback to top |