CX301595
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15E_SULIN (50S ribosomal protein L15e OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=rpl15e PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 9.036e-37 Identity = 83/198 (41.92%), Postives = 122/198 (61.62%), Query Frame = 3 Query: 39 MGAYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPN-HKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLR-VKGHRANNTIGGSHRAAWKRR 626 + Y Y+E W ++ + +LR R ++R+ I R+ KPTR ++A LGYKAKQG+V+ R+ VRRGG +P +KG +PK G+ + + +AEERA R NL VL SY++ +D YKY+E+I+VDP+H I+NDP W+ +P +++R RGLTSAGKK RGLR KG + G+ + W R+ Sbjct: 3 LSVYHYIENTWNSEEWK--KGVLRQRFIEWRKEPSIVRLAKPTRLNRARSLGYKAKQGFVIVRVRVRRGGLNKPRPNKG---RRPKRMGVYGYGPAKGYKWIAEERAARKYPNLEVLGSYYVGEDGLYKYYEIIMVDPSHPVIKNDPNYKWLQDPSNRNRVFRGLTSAGKKARGLRKSKGFK------GTVKHKWSRK 189
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15E_SULIM (50S ribosomal protein L15e OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=rpl15e PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 9.036e-37 Identity = 83/198 (41.92%), Postives = 122/198 (61.62%), Query Frame = 3 Query: 39 MGAYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPN-HKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLR-VKGHRANNTIGGSHRAAWKRR 626 + Y Y+E W ++ + +LR R ++R+ I R+ KPTR ++A LGYKAKQG+V+ R+ VRRGG +P +KG +PK G+ + + +AEERA R NL VL SY++ +D YKY+E+I+VDP+H I+NDP W+ +P +++R RGLTSAGKK RGLR KG + G+ + W R+ Sbjct: 3 LSVYHYIENTWNSEEWK--KGVLRQRFIEWRKEPSIVRLAKPTRLNRARSLGYKAKQGFVIVRVRVRRGGLNKPRPNKG---RRPKRMGVYGYGPAKGYKWIAEERAARKYPNLEVLGSYYVGEDGLYKYYEIIMVDPSHPVIKNDPNYKWLQDPSNRNRVFRGLTSAGKKARGLRKSKGFK------GTVKHKWSRK 189
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15E_SULIL (50S ribosomal protein L15e OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=rpl15e PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 9.036e-37 Identity = 83/198 (41.92%), Postives = 122/198 (61.62%), Query Frame = 3 Query: 39 MGAYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPN-HKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLR-VKGHRANNTIGGSHRAAWKRR 626 + Y Y+E W ++ + +LR R ++R+ I R+ KPTR ++A LGYKAKQG+V+ R+ VRRGG +P +KG +PK G+ + + +AEERA R NL VL SY++ +D YKY+E+I+VDP+H I+NDP W+ +P +++R RGLTSAGKK RGLR KG + G+ + W R+ Sbjct: 3 LSVYHYIENTWNSEEWK--KGVLRQRFIEWRKEPSIVRLAKPTRLNRARSLGYKAKQGFVIVRVRVRRGGLNKPRPNKG---RRPKRMGVYGYGPAKGYKWIAEERAARKYPNLEVLGSYYVGEDGLYKYYEIIMVDPSHPVIKNDPNYKWLQDPSNRNRVFRGLTSAGKKARGLRKSKGFK------GTVKHKWSRK 189
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15E_SULIK (50S ribosomal protein L15e OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=rpl15e PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 9.036e-37 Identity = 83/198 (41.92%), Postives = 122/198 (61.62%), Query Frame = 3 Query: 39 MGAYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPN-HKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLR-VKGHRANNTIGGSHRAAWKRR 626 + Y Y+E W ++ + +LR R ++R+ I R+ KPTR ++A LGYKAKQG+V+ R+ VRRGG +P +KG +PK G+ + + +AEERA R NL VL SY++ +D YKY+E+I+VDP+H I+NDP W+ +P +++R RGLTSAGKK RGLR KG + G+ + W R+ Sbjct: 3 LSVYHYIENTWNSEEWK--KGVLRQRFIEWRKEPSIVRLAKPTRLNRARSLGYKAKQGFVIVRVRVRRGGLNKPRPNKG---RRPKRMGVYGYGPAKGYKWIAEERAARKYPNLEVLGSYYVGEDGLYKYYEIIMVDPSHPVIKNDPNYKWLQDPSNRNRVFRGLTSAGKKARGLRKSKGFK------GTVKHKWSRK 189
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15E_SULIA (50S ribosomal protein L15e OS=Sulfolobus islandicus (strain M.16.27) GN=rpl15e PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 9.036e-37 Identity = 83/198 (41.92%), Postives = 122/198 (61.62%), Query Frame = 3 Query: 39 MGAYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPN-HKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLR-VKGHRANNTIGGSHRAAWKRR 626 + Y Y+E W ++ + +LR R ++R+ I R+ KPTR ++A LGYKAKQG+V+ R+ VRRGG +P +KG +PK G+ + + +AEERA R NL VL SY++ +D YKY+E+I+VDP+H I+NDP W+ +P +++R RGLTSAGKK RGLR KG + G+ + W R+ Sbjct: 3 LSVYHYIENTWNSEEWK--KGVLRQRFIEWRKEPSIVRLAKPTRLNRARSLGYKAKQGFVIVRVRVRRGGLNKPRPNKG---RRPKRMGVYGYGPAKGYKWIAEERAARKYPNLEVLGSYYVGEDGLYKYYEIIMVDPSHPVIKNDPNYKWLQDPSNRNRVFRGLTSAGKKARGLRKSKGFK------GTVKHKWSRK 189
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15E_ARCFU (50S ribosomal protein L15e OS=Archaeoglobus fulgidus GN=rpl15e PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.434e-36 Identity = 85/195 (43.59%), Postives = 125/195 (64.10%), Query Frame = 3 Query: 48 YKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRK--RPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKGHRANNTIGGSHRAAWKRR 626 Y Y+ E W++ + L+ R ++R+ + R+ +PTR D+A LGYKAK+G +V R+ +RRGGR+ RPN KG K K +N+ +NL+ +AEERA R N+ VLNSYW+ +D YK+FEVILVD +H AI++DP+++W+ + R RGLTSAG+K RGLR KG R + S RA ++++ Sbjct: 5 YAYIREAWKRPYEGYVGELMWHRLQKWRREPAVVRIPRPTRLDRARALGYKAKKGIIVVRVRIRRGGRRATRPN-KG---RKSKGLMVNRRTPKKNLQWIAEERANRKYPNMEVLNSYWVGEDGRYKWFEVILVDRDHPAIKSDPQLSWVSRT--RGRVYRGLTSAGRKARGLRRKG-RGAEKVRPSLRANFRKK 192
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15E_SULAC (50S ribosomal protein L15e OS=Sulfolobus acidocaldarius GN=rpl15e PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.485e-36 Identity = 82/205 (40.00%), Postives = 124/205 (60.49%), Query Frame = 3 Query: 39 MGAYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKGHRANNTIGGSHRAAWKRRNTKVFLRYR 653 + Y Y+E+ W+ K D R +LR R ++R+ I R+++PTR ++A LGYKAKQG+V+ R+ VRRGG +P +PK G+ + R +AEERA R NL VL SY++ +D YKY+EVI+VD +H IR+DP + W+ + V++ R RGLTSAG+K RGL + + G+ + WK++ + L+ R Sbjct: 3 LSMYHYIEQTWQNK--DWRRSILRKRLIEWRRQPAITRIDRPTRLNRARALGYKAKQGFVMVRVRVRRGGLNKPRPNS--GRRPKRMGVYGYGPSKGYRWIAEERAARKFPNLEVLGSYYVAEDGMYKYYEVIMVDYSHPVIRSDPELKWLQDSVNRKRVFRGLTSAGQKSRGL-----TKSRGLKGTVQRKWKKKQKERQLKRR 198
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15E_META3 (50S ribosomal protein L15e OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rpl15e PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.305e-35 Identity = 80/187 (42.78%), Postives = 112/187 (59.89%), Query Frame = 3 Query: 39 MGAYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKGHRANNTIGG 599 M YK+++E W+K ++ L R +R+ + RV KPTR D+A LGYKAKQG +V R+AVRRGG ++P K KP +N++ ++++ +AEERA + NL VLNSY + +D K++EVIL+D NH +I+ND + H +R RGLTSAGKK RGL KG A G Sbjct: 1 MSMYKHVKEAWKKPSESYVKGLQWARMQDWRKEPTVVRVEKPTRIDRARSLGYKAKQGVIVARVAVRRGGLRKPRPKHSK--KPATMAMNKITMSKSIQRIAEERAAKRYPNLEVLNSYSVGEDGKRKWYEVILIDVNHPSIKNDSSYKNLCTGKHTNRVFRGLTSAGKKGRGLMNKGKGAEKVRPG 185
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15E_HALMA (50S ribosomal protein L15e OS=Haloarcula marismortui GN=rpl15e PE=1 SV=3) HSP 1 Score: 149.828 bits (377), Expect = 1.305e-35 Identity = 77/182 (42.31%), Postives = 110/182 (60.44%), Query Frame = 3 Query: 45 AYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKGHRANNT 590 AY Y+ + W+ L L R ++R ++R+ +PTR DKA GYKAKQG +V R++VR+G ++ HK + K QG+ ++ ++++ VAEERA R NLRVLNSY + QD K+ EVIL+DPNH AI+ND ++WI R RGLT AG+++RGL KG + T Sbjct: 5 AYSYIRDAWKNPGDGQLAELQWQRQQEWRNEGAVERIERPTRLDKARSQGYKAKQGVIVARVSVRKGSARKRRHKA--GRRSKRQGVTRITRRKDIQRVAEERASRTFPNLRVLNSYSVGQDGRQKWHEVILIDPNHPAIQNDDDLSWICADDQADRVFRGLTGAGRRNRGLSGKGKGSEKT 184
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15E_UNCMA (50S ribosomal protein L15e OS=Uncultured methanogenic archaeon RC-I GN=rpl15e PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.704e-35 Identity = 74/176 (42.05%), Postives = 109/176 (61.93%), Query Frame = 3 Query: 45 AYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKG 572 AY Y+ + W+ + L R ++R+ + ++++PTR D+A LGYKAKQG +V R VRRGGR++ + K K+ G+ L +++ +AE RA R N+ VLNSYW+ QD +K++E+ILVDP+H +I +D ++WI H+ R RGLTSAGKK RG R KG Sbjct: 5 AYSYIRDAWKNPSKTYVGELFWERLQEWRKEPTVVKIDRPTRLDRARALGYKAKQGIIVARAHVRRGGRRKSRYSR--GRKSKHMGLRTLTRRTSIQRMAEVRASRKFPNMEVLNSYWVGQDGKHKWYEIILVDPHHPSIASDKNLSWITKGTHRGRAERGLTSAGKKGRGQRRKG 178 The following BLAST results are available for this feature:
BLAST of CX301595 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 93
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Sequences
The
following sequences are available for this feature:
EST sequence >CX301595 ID=CX301595; Name=CX301595; organism=Citrus sinensis; type=EST; length=706bpback to top |