CN191739
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN191739 vs. ExPASy Swiss-Prot
Match: EXP10_ORYSJ (Expansin-A10 OS=Oryza sativa subsp. japonica GN=EXPA10 PE=2 SV=2) HSP 1 Score: 211.46 bits (537), Expect = 3.907e-54 Identity = 104/207 (50.24%), Postives = 131/207 (63.29%), Query Frame = 1 Query: 115 WTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPG-SIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNN 732 W A A++Y +G+L GYG T LSTALF G +CG C+E+KCV+D ++C PG SI VTATNFC GG CNPP HF L FE+IA +KAG++P+ YRRV C R GG+RF + G S+F VLI+NVGGAGDVR+V IKG+ + W M RNWGQ W NS GQ LSF++T+SDG T+ + N Sbjct: 33 WRSAKASYYAADPEDAIGGACG-FGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVDDLKYCLPGTSIVVTATNFCAPNFGLPADAGGVCNPPNHHFLLPIQSFEKIALWKAGVMPIQYRRVNCLRDGGVRFAVAGRSFFLTVLISNVGGAGDVRSVKIKGTESGWLSMGRNWGQIWHINSDFRGQPLSFELTSSDGKTLTNYN 238
BLAST of CN191739 vs. ExPASy Swiss-Prot
Match: EXP12_ARATH (Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=2 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 3.657e-52 Identity = 102/207 (49.28%), Postives = 131/207 (63.29%), Query Frame = 1 Query: 112 GWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKC--VNDPRWC-RPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQY-KAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSR-TDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHT 717 GW AHAT+Y Y N Y G+G +TAALS LF +G SCG C++++C DP+WC R ++ VTATNFC GWCN P+ HFD+S P F +IA+ GIVPV YRRV C R+GG+RFT+ G FN+V+I+NVGG G VR+V+++GS+ W M+RNWG NWQS+ L GQ LSFKVT +D T Sbjct: 26 GWIRAHATYYGVNDSPASLGGACGYDNPYHAGFGAHTAALSGELFRSGESCGGCYQVRCDFPADPKWCLRGAAVTVTATNFCPTNNN-----NGWCNLPRHHFDMSSPAFFRIARRGNEGIVPVFYRRVGCKRRGGVRFTMRGQGNFNMVMISNVGGGGSVRSVAVRGSKGKTWLQMTRNWGANWQSSGDLRGQRLSFKVTLTDSKT 227
BLAST of CN191739 vs. ExPASy Swiss-Prot
Match: EXP21_ARATH (Expansin-A21 OS=Arabidopsis thaliana GN=EXPA21 PE=2 SV=3) HSP 1 Score: 203.756 bits (517), Expect = 8.146e-52 Identity = 104/202 (51.49%), Postives = 128/202 (63.37%), Query Frame = 1 Query: 115 WTDAHATFYXXXXXXXXXXXXXX-YGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHT 717 W DA A +Y YG+L GYG TAALSTALFN+G SCGAC+EI C +P+ C GSI +TAT+ C WC P +HFDLS P+F +IAQ KA +VPV YRRVPC++ GG++F + G+ +L NVGGAGD+ AVS KGS+T W MSR WGQNW +N L GQS+S +VTTSDG T Sbjct: 45 WYDARAAYYGDIHGGGTELEGACGYGDLNKHGYGLATAALSTALFNSGASCGACYEIMCSPNPQGCLSGSIKITATDLCPPG-------SAWCYLPNKHFDLSLPMFIKIAQVKAKMVPVRYRRVPCAKTGGVKFEVKGNPNILTILPYNVGGAGDIIAVSAKGSKTAWVVMSRYWGQNWTTNVNLTGQSVSLRVTTSDGIT 239
BLAST of CN191739 vs. ExPASy Swiss-Prot
Match: EXP30_ORYSJ (Putative expansin-A30 OS=Oryza sativa subsp. japonica GN=EXPA30 PE=3 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 3.096e-51 Identity = 103/210 (49.05%), Postives = 134/210 (63.81%), Query Frame = 1 Query: 115 WTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGS--IFVTATNFCXXXXXXXXXXGG--WCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIK-GSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTT-SDGHTVVS 726 WT AHATFY YGNLY+ GYGT+TAALST LF +G CG C++++CV C GS I VTATN C GG WCNPP+ HFDLS+P F ++A ++AGIVPV YRRVPC+R GG+RF + G+ Y+ L + NV GAGDV + +K G W MS NWG ++Q+ + L GQ+LSFKVT+ + G T+++ Sbjct: 37 WTPAHATFYGDETASETMGGACGYGNLYASGYGTDTAALSTTLFKDGYGCGTCYQMRCVGTAS-CYRGSPAITVTATNLCPPNWAEDPDRGGGGWCNPPRAHFDLSKPAFMRMADWRAGIVPVMYRRVPCARAGGLRFALQGNPYWLLAYVMNVAGAGDVGDMWVKAGGGGGWVRMSHNWGASYQAFAQLGGQALSFKVTSYTTGQTILA 245
BLAST of CN191739 vs. ExPASy Swiss-Prot
Match: EXP16_ORYSJ (Expansin-A16 OS=Oryza sativa subsp. japonica GN=EXPA16 PE=2 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 9.007e-51 Identity = 97/183 (53.01%), Postives = 122/183 (66.67%), Query Frame = 1 Query: 184 YGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGS--IFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVS 726 YG+L YG TA +S ALF G +CG C+E++CVN WC GS + VTAT+FC GGWCN P++HF++S+ F ++A+ KA IVPV +RRV C R GG+RFTI G + F VLITNV G+V AV +KGSRT W PM RNWGQNWQ ++ L GQ LSF+VT G TVV+ Sbjct: 57 YGDLDIFRYGRYTAGVSGALFGRGSACGGCYEVRCVNHVLWCLRGSPTVVVTATDFCAPNLGLSDDYGGWCNFPKEHFEMSEAAFLRVAKAKADIVPVQFRRVSCDRAGGMRFTITGGASFLQVLITNVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCDADLRGQPLSFEVTGGRGRTVVA 239
BLAST of CN191739 vs. ExPASy Swiss-Prot
Match: EXP20_ORYSJ (Expansin-A20 OS=Oryza sativa subsp. japonica GN=EXPA20 PE=2 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.536e-50 Identity = 100/206 (48.54%), Postives = 128/206 (62.14%), Query Frame = 1 Query: 115 WTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCV--NDPRWCRPG-SIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVV 723 W ATFY YGNLY + YG N AALST LFN+G SCG C+ I C P WC+ G +I VT TN+ GGWCN + +FD+SQP +E I Y AGIVP+ Y++V C R GG+RF ING +YF LVL+TN+ G+G + ++S+KGS T W M+RNWG NWQ + L GQ+LSF VT++ G T+V Sbjct: 23 WLPGTATFYGGADGSGTMGGACGYGNLYDQRYGINNAALSTPLFNDGASCGQCYLIICDYGKAPDWCKLGKAITVTGTNY-----------GGWCNATRPYFDMSQPAWENIGIYSAGIVPILYQQVKCWRYGGVRFIINGFNYFELVLVTNMAGSGSIVSMSVKGSCTGWIQMTRNWGANWQCLAGLAGQALSFNVTSTGGQTIV 217
BLAST of CN191739 vs. ExPASy Swiss-Prot
Match: EXP20_ARATH (Expansin-A20 OS=Arabidopsis thaliana GN=EXPA20 PE=2 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 6.455e-49 Identity = 92/183 (50.27%), Postives = 120/183 (65.57%), Query Frame = 1 Query: 184 YGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGS--IFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVS 726 YG+L + +A LS LFN G SCGAC E++CVN RWC GS + VTAT+FC GGWCN P++H +LS F IA+ +A ++P+ YRRV C R+GG+RF+++G S+F VLI+NVG G+V V +KG T W PM+RNWGQNW S+ L GQSLSF+VT G T+ S Sbjct: 53 YGDLRQSSFAGYSAGLSGKLFNRGSSCGACLEVRCVNHIRWCLQGSPSVVVTATDFCPPNSGLSSDYGGWCNFPKEHLELSHAAFTGIAETRAEMIPIQYRRVKCGRRGGLRFSLSGSSHFFQVLISNVGLDGEVVGVKVKGHTTAWIPMARNWGQNWHSSLDLIGQSLSFEVTLKGGKTIAS 235
BLAST of CN191739 vs. ExPASy Swiss-Prot
Match: EXP17_ORYSJ (Expansin-A17 OS=Oryza sativa subsp. japonica GN=EXPA17 PE=2 SV=2) HSP 1 Score: 171.4 bits (433), Expect = 4.480e-42 Identity = 90/203 (44.33%), Postives = 115/203 (56.65%), Query Frame = 1 Query: 115 WTDAHATFYXXXXXXXXXXXXXX--YGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGS--IFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIK--GSRTDWQPMSRNWGQNWQSNSYL-NGQSLSFKVTT 702 W D ATFY N Y T TAALST LF +G CG C+E++CV P WC PGS + +T TN C GGWCNPP+ HFD++ P F ++AQ AGIVPV YRRVPC R GG+RF + G+ Y+ L+ + NVGGAGDV ++S+K G W + NWG +Q + L N L+ K+TT Sbjct: 52 WHDGSATFYGDPSGMGDDFGGACGYVSNDIVSLYSTKTAALSTPLFADGNGCGQCYELRCVKSP-WCNPGSPSVVITGTNLCPPNWYLPNDDGGWCNPPRHHFDMAPPSFLKLAQRVAGIVPVQYRRVPCQRTGGVRFCLQGNHYWLLLYVMNVGGAGDVSSLSVKTSGGGGAWIQAAHNWGITYQVFAALDNSDGLTVKLTT 253
BLAST of CN191739 vs. ExPASy Swiss-Prot
Match: EXP26_ORYSJ (Expansin-A26 OS=Oryza sativa subsp. japonica GN=EXPA26 PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.033e-38 Identity = 85/205 (41.46%), Postives = 119/205 (58.05%), Query Frame = 1 Query: 115 WTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGS-RTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVS 726 W D HATFY G ++GYG TAA+S ALF+NG CGAC+E+K + ++ VTATN +HFDL+ P F IA+ K G+VPVSYR+V C R+GGI++TI G+ +N+V++ NVGGAGDV +++KG+ R W P+ R+WGQ W++ + L G+SL+F+V T D S Sbjct: 82 WVDGHATFYGGRDASGTTEGGAC-GYKDADGYGAMTAAVSPALFDNGAGCGACYELKGDSGK------TVVVTATNQAPPPVNGMKG---------EHFDLTMPAFLSIAEEKLGVVPVSYRKVACVRQGGIKYTITGNPSYNMVMVKNVGGAGDVVKLTVKGTKRVKWTPLQRSWGQLWKTEANLTGESLTFRVMTGDHRKATS 270
BLAST of CN191739 vs. ExPASy Swiss-Prot
Match: EXPB5_ORYSJ (Expansin-B5 OS=Oryza sativa subsp. japonica GN=EXPB5 PE=2 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 8.222e-20 Identity = 64/224 (28.57%), Postives = 100/224 (44.64%), Query Frame = 1 Query: 106 GQGWTDAHATFYXXXXXXXXXXXXXXYGNLYSEG-YGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQ-------YKAGIVPVSYRRVPCSRKGGIRFTINGHS--YFNLVLITNVGGAGDVRAVSIKGSR--TDWQPMSRNWGQNWQSNSYLN---GQSLSFKVTTSDGHTVVSNN 732 G GW+ AT+Y Y + + + + AA +LF NG CG+C++IKC + R C + V T+ C GG C HFD+S F +A AG++ + Y+RVPC + F ++ S Y+ +L+ G GD+ AV I +R W+ M ++WG W+ NS S ++T+ G +V+NN Sbjct: 42 GYGWSSGGATWYGGPQGDGSEGGACGYQSAVGQRPFSSMIAAGGPSLFKNGKGCGSCYQIKCTGN-RACSGRPVTVVITDSC---------PGGVCLNEAAHFDMSGTAFGAMANRGMGDRLRSAGVLKIQYKRVPCRFAMNVAFKVDAGSNPYYLAILVQYANGDGDLAAVHIMEARGGGGWKAMQQSWGATWRLNSNTGKPLSPPFSIRLTSGSGKVLVANN 255 The following BLAST results are available for this feature:
BLAST of CN191739 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 84
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Sequences
The
following sequences are available for this feature:
EST sequence >CN191739 ID=CN191739; Name=CN191739; organism=Citrus sinensis; type=EST; length=734bpback to top |