CN191733

Overview
NameCN191733
Unique NameCN191733
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length721
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN191733 vs. ExPASy Swiss-Prot
Match: AROD_METM7 (3-dehydroquinate dehydratase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=aroD PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.109e-16
Identity = 50/165 (30.30%), Postives = 92/165 (55.76%), Query Frame = 3
Query:  204 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENKRVDVLRLAMELGADYIDVELQVAREFN-DSVRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQI 695
            +IC+P++ E+V   +    +A   G D+VE R+D LK+       + + + S VP++ T R  WEGG +   +N+R+++L+ A++  A ++D+EL+  R       R +     K+I+S H+++ TP +++L  +V +    G DI KFAT A    D  ++  +
Sbjct:    1 MICIPVIDENVCDAINSAKEALKYG-DIVEFRVDLLKDVT----FEDIEEFSKVPSIITIRAEWEGGNWKKSDNERIELLKHAIKNNAKFVDIELKEERNLELVKYRNESNSNTKIIISYHDFEKTPEIDELIEVVEKELKIG-DIAKFATFAHSKEDTLKILNL 159          
BLAST of CN191733 vs. ExPASy Swiss-Prot
Match: AROD_COXB1 (3-dehydroquinate dehydratase OS=Coxiella burnetii (strain CbuK_Q154) GN=aroD PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.060e-16
Identity = 47/172 (27.33%), Postives = 97/172 (56.40%), Query Frame = 3
Query:  195 NPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENKRVDVLRLAMELGADYIDVELQVAREFNDSVRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQ 710
            N   ICV ++G+++++ +  + +A  +  D VE+R+D L+  NP   ++ +   +    +   R   +GG++ G    + ++L+   +LG DY+D++L VA +   S+  KK    K+I+S HN+ +TP + +L+ L+  ++    D+ KFAT +    DV  +F++ ++ +
Sbjct:    3 NTPRICVVVIGKTLEEFLSQL-EAAQTAVDFVELRIDYLEQINPNW-VRIIKNHTQKKAILCCRARADGGKFLGTPEAQQEILQAGNDLGFDYLDIDLPVANKI--SIHEKK---AKIIISYHNFLHTPPITELNFLLENMRLFNPDVFKFATKSEQYEDVKTLFKLLINKK 167          
BLAST of CN191733 vs. ExPASy Swiss-Prot
Match: AROD_COXBU (3-dehydroquinate dehydratase OS=Coxiella burnetii GN=aroD PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.303e-16
Identity = 47/172 (27.33%), Postives = 97/172 (56.40%), Query Frame = 3
Query:  195 NPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENKRVDVLRLAMELGADYIDVELQVAREFNDSVRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQ 710
            N   ICV ++G+++++ +  + +A  +  D VE+R+D L+  NP   ++ +   +    +   R   +GG++ G    + ++L+   +LG DY+D++L VA +   S+  KK    K+I+S HN+ +TP + +L+ L+  ++    D+ KFAT +    DV  +F++ ++ +
Sbjct:    3 NTPRICVVVIGKTLEEFLSQL-EAAQTAVDFVELRIDYLEQINPNW-VRIIKNHTHKKAILCCRARADGGKFLGTPEAQQEILQAGNDLGFDYLDIDLPVANKI--SIHEKK---AKIIISYHNFLHTPPITELNFLLENMRLFNPDVFKFATKSEQYEDVKTLFKLLINKK 167          
BLAST of CN191733 vs. ExPASy Swiss-Prot
Match: AROD_COXBR (3-dehydroquinate dehydratase OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=aroD PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.303e-16
Identity = 47/172 (27.33%), Postives = 97/172 (56.40%), Query Frame = 3
Query:  195 NPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENKRVDVLRLAMELGADYIDVELQVAREFNDSVRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQ 710
            N   ICV ++G+++++ +  + +A  +  D VE+R+D L+  NP   ++ +   +    +   R   +GG++ G    + ++L+   +LG DY+D++L VA +   S+  KK    K+I+S HN+ +TP + +L+ L+  ++    D+ KFAT +    DV  +F++ ++ +
Sbjct:    3 NTPRICVVVIGKTLEEFLSQL-EAAQTAVDFVELRIDYLEQINPNW-VRIIKNHTHKKAILCCRARADGGKFLGTPEAQQEILQAGNDLGFDYLDIDLPVANKI--SIHEKK---AKIIISYHNFLHTPPITELNFLLENMRLFNPDVFKFATKSEQYEDVKTLFKLLINKK 167          
BLAST of CN191733 vs. ExPASy Swiss-Prot
Match: AROD_COXBN (3-dehydroquinate dehydratase OS=Coxiella burnetii (strain Dugway 5J108-111) GN=aroD PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.303e-16
Identity = 47/172 (27.33%), Postives = 97/172 (56.40%), Query Frame = 3
Query:  195 NPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENKRVDVLRLAMELGADYIDVELQVAREFNDSVRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQ 710
            N   ICV ++G+++++ +  + +A  +  D VE+R+D L+  NP   ++ +   +    +   R   +GG++ G    + ++L+   +LG DY+D++L VA +   S+  KK    K+I+S HN+ +TP + +L+ L+  ++    D+ KFAT +    DV  +F++ ++ +
Sbjct:    3 NTPRICVVVIGKTLEEFLSQL-EAAQTAVDFVELRIDYLEQINPNW-VRIIKNHTHKKAILCCRARADGGKFLGTPEAQQEILQAGNDLGFDYLDIDLPVANKI--SIHEKK---AKIIISYHNFLHTPPITELNFLLENMRLFNPDVFKFATKSEQYEDVKTLFKLLINKK 167          
BLAST of CN191733 vs. ExPASy Swiss-Prot
Match: AROD_COXB2 (3-dehydroquinate dehydratase OS=Coxiella burnetii (strain CbuG_Q212) GN=aroD PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.303e-16
Identity = 47/172 (27.33%), Postives = 97/172 (56.40%), Query Frame = 3
Query:  195 NPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENKRVDVLRLAMELGADYIDVELQVAREFNDSVRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQ 710
            N   ICV ++G+++++ +  + +A  +  D VE+R+D L+  NP   ++ +   +    +   R   +GG++ G    + ++L+   +LG DY+D++L VA +   S+  KK    K+I+S HN+ +TP + +L+ L+  ++    D+ KFAT +    DV  +F++ ++ +
Sbjct:    3 NTPRICVVVIGKTLEEFLSQL-EAAQTAVDFVELRIDYLEQINPNW-VRIIKNHTHKKAILCCRARADGGKFLGTPEAQQEILQAGNDLGFDYLDIDLPVANKI--SIHEKK---AKIIISYHNFLHTPPITELNFLLENMRLFNPDVFKFATKSEQYEDVKTLFKLLINKK 167          
BLAST of CN191733 vs. ExPASy Swiss-Prot
Match: AROD_METMP (3-dehydroquinate dehydratase OS=Methanococcus maripaludis GN=aroD PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.863e-15
Identity = 49/165 (29.70%), Postives = 90/165 (54.55%), Query Frame = 3
Query:  204 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENKRVDVLRLAMELGADYIDVELQVAREFN-DSVRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQI 695
            +IC+P++ + V   +    +A   G D+VE R+D L + N     K + + S +P++ T R  WEGG +     +R+++L+ A++  A +ID+EL+  +       R +     K+IVS H+++ TP +++L ++V +    G DI KFAT A    D  ++  +
Sbjct:    1 MICIPVIDKDVSDAINSAKEALKYG-DIVEFRIDLLNDVN----FKDIEEFSKIPSIITIRAEWEGGAWRKSNEERIELLKNAIKNNAKFIDIELKEEKNLELVKYRNEIGSTTKIIVSYHDFEKTPEIDELIDVVEKELKIG-DIAKFATFAHSKEDTLKILNL 159          
BLAST of CN191733 vs. ExPASy Swiss-Prot
Match: AROD_METM5 (3-dehydroquinate dehydratase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=aroD PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.000e-14
Identity = 47/165 (28.48%), Postives = 89/165 (53.94%), Query Frame = 3
Query:  204 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENKRVDVLRLAMELGADYIDVELQVAREFN-DSVRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQI 695
            +IC+P++ E +   +    +A   G D+VE R+D L N       + + + S +P++ T R  WEGG +     +R+++L+ A++  A ++D+EL+  +       R +     K+IVS H+++ TP +++L ++V +    G DI KFAT A    D  ++  +
Sbjct:    1 MICIPVIDEDMSDAINSAKEALKYG-DIVEFRVDLLNNVT----FEDITEFSKIPSIITIRAEWEGGAWKKSNEERIELLKHAIKNNAKFVDIELKEEKNLELVKYRNEIRSNTKIIVSYHDFEKTPEIDELIDVVEKELKIG-DIAKFATFANSKEDTLKILNL 159          
BLAST of CN191733 vs. ExPASy Swiss-Prot
Match: AROD_METKA (3-dehydroquinate dehydratase OS=Methanopyrus kandleri GN=aroD PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.910e-14
Identity = 59/176 (33.52%), Postives = 93/176 (52.84%), Query Frame = 3
Query:  204 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIK----ESPVPTLFTYRPIWEGGQYDGDENKRVDVL-RLAMELGADYIDVELQVAREFNDSVRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVP 716
            +I   + G +++ MV    +A   GAD +E+RLD L+N +    ++ + +    E  V TL   R   EGG Y GDE++R+++L R++ E  ADY+D+EL VA E   S        C+ IVS HN++ TP  E+L  +  R    G D+ K  T A    D  R+ ++   ++ P
Sbjct:    1 MIIATLTGRTIEDMVELAIEAVEQGADALEVRLDYLENLDMSTALRAVRECTRYERVVATL---RREEEGGLYKGDEDRRLEILERVSSE--ADYVDLELDVAEEEIIS------PSCETIVSYHNFENTPPKEELIGIRDRCAELG-DVAKVVTMARGHEDALRILEVVRTAEAP 164          
BLAST of CN191733 vs. ExPASy Swiss-Prot
Match: AROD_METS3 (3-dehydroquinate dehydratase OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=aroD PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.483e-14
Identity = 52/170 (30.59%), Postives = 84/170 (49.41%), Query Frame = 3
Query:  201 TLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENKRVDVLRLAMELGADYIDVELQVAREFNDSVRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQ 710
            T I +PI     + ++         GAD++E R+D L N N  ++IK +I+E   P + T R   EGG + G E +R+D+L     L  DY+D+ELQ    +   ++         IVS H++  TP + ++  +V + Q  G DI K A    D+ D  ++  I  H +
Sbjct:    5 TKIAIPIFQAKKEDVIKVAEDCIEKGADVLEFRIDALDNPN-FDDIKEIIEEINFPIIATNRISSEGGSFKGSEEERIDILLKCAPL-VDYVDIELQSDDRY---IKQIHDTGVTTIVSYHDFHKTPEINEIMYIVEKEQKLG-DIAKVAFMPNDLDDTLKILAILSHCE 168          
The following BLAST results are available for this feature:
BLAST of CN191733 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
AROD_METM73.109e-1630.303-dehydroquinate dehydratase OS=Methanococcus mari... [more]
AROD_COXB14.060e-1627.333-dehydroquinate dehydratase OS=Coxiella burnetii ... [more]
AROD_COXBU5.303e-1627.333-dehydroquinate dehydratase OS=Coxiella burnetii ... [more]
AROD_COXBR5.303e-1627.333-dehydroquinate dehydratase OS=Coxiella burnetii ... [more]
AROD_COXBN5.303e-1627.333-dehydroquinate dehydratase OS=Coxiella burnetii ... [more]
AROD_COXB25.303e-1627.333-dehydroquinate dehydratase OS=Coxiella burnetii ... [more]
AROD_METMP5.863e-1529.703-dehydroquinate dehydratase OS=Methanococcus mari... [more]
AROD_METM51.000e-1428.483-dehydroquinate dehydratase OS=Methanococcus mari... [more]
AROD_METKA2.910e-1433.523-dehydroquinate dehydratase OS=Methanopyrus kandl... [more]
AROD_METS36.483e-1430.593-dehydroquinate dehydratase OS=Methanobrevibacter... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0005L14_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0005L14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN191733 ID=CN191733; Name=CN191733; organism=Citrus sinensis; type=EST; length=721bp
GAGGCACCCACCAACCCCCGCCTCGCCTACCTTCTCTTGCTTGCTGACTT
AAGATTGACCAAACTCTGTTATTCTTCTTCATCAAACTCATAACTCAAAA
CTCTCAAGCTCAAGTCACTCACTTTTTCACCATGGAATCTCCCAACCTTT
TGGTTGCTTCTGGCTCAAAACTTGTAAGTGGAAGTATGAGGAAGAATCCA
ACCCTAATTTGCGTTCCTATAATGGGGGAATCAGTGGATAAGATGGTGGT
TGATATGGGTAAGGCAAATGCTAGTGGTGCTGATCTTGTCGAAATTCGTT
TAGATGGTTTGAAGAATTTTAATCCTCGTGAGAATATCAAAACTCTGATT
AAAGAATCCCCTGTGCCCACCTTGTTCACGTACAGACCGATTTGGGAGGG
TGGTCAATATGATGGTGATGAAAACAAGCGAGTGGATGTACTTCGGTTGG
CCATGGAGTTGGGAGCTGATTACATTGATGTTGAGCTTCAGGTTGCTCGT
GAGTTCAATGATTCTGTACGTGGAAAGAAACCTGAAAAGTGCAAAGTCAT
AGTTTCTTCTCACAACTATCAGTATACTCCGTCTGTGGAAGATCTCAGCA
ATCTTGTGGCAAGGATACAAGCATCTGGAGCTGATATAGTTAAGTTTGCG
ACGACTGCATTGGACATTACTGATGTGGCACGCGTTTTCCAAATAACTGT
GCATTCTCAAGTTCCAATAAT
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