CN191732
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: YDIB_SALA4 (Quinate/shikimate dehydrogenase OS=Salmonella agona (strain SL483) GN=ydiB PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.500e-16 Identity = 70/229 (30.57%), Postives = 111/229 (48.47%), Query Frame = -2 Query: 172 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDG---LRGRLNV---SGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGH-YALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIM 837 G ++P+K+ A + DE+ AK +GA+N I+ DG L GYNTD G I AI++ +RG+ V +GG ++A+ + I V A R + + TV A A E D IL N T +GM+P +E+ I +L LV + VY P +T+LL++A+++G + G M + Q EQ+E +TG P + +++M Sbjct: 63 GTGVSMPNKQLACEYVDELTPAAKLVGAINTIVN--DDGYLRGYNTDGTGHIRAIKESGFDIRGKTMVLLGAGGAATAIGAQ--AAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENT-DCVVTVTDLADQHAFTEALASAD--ILTNGTKVGMKPLENESLIGDVSLLRPELLVTECVYNPHMTKLLQQAQQAGCKTIDGYGMLLWQGAEQFELWTGKAFPLDYVKQVM 284
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: AROE_PELPD (Shikimate dehydrogenase OS=Pelobacter propionicus (strain DSM 2379) GN=aroE PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.500e-16 Identity = 74/242 (30.58%), Postives = 109/242 (45.04%), Query Frame = -2 Query: 172 FFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLF-GYNTDYVGAISAIE------DGLRGRLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDE-TPIPKHALG-HYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIM 870 F Q+ + G TIPHK++ + D V K++GA N + DG L G NTD +G +S ++ + R + +GGV+ A L ++ I + + LAET L + D IL NTT +GM+ K +E +P P AL + +D VYTP +TR LREA +G + GLEMFI QA Q+ +TG P+ Q ++ Sbjct: 52 FIQSVRLLNIRGACVTIPHKQSIIPLLDRVTDRVKALGAANTLYW---DGDLLCGDNTDILGFMSPLQADPPSAEQTRVLVLGAGGVARAAVAGL----------------KSLGLNQITITDIVDASSATLAETFD---LKTIPWSQRSEVDAHILINTTPLGMKGKFEEESPYPTEALAARQGIAYDIVYTPFVTRFLREARAAGWKTIGGLEMFISQADHQFLTWTGRNLPQAAKQAVI 271
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: AROE_IGNH4 (Shikimate dehydrogenase OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=aroE PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.500e-16 Identity = 65/231 (28.14%), Postives = 108/231 (46.75%), Query Frame = -2 Query: 169 FAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIED-----GLRGRLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL-PAPKELFQKIMA 843 F G + TIPHK +K D D + +GA N + + DGK++ +NTD G +I+D GL+ + +GG + A L A+V + NRT ++A+ LAE +G L +++ D I+ N T +GM PIP + ++ D VY P T L+ GA V+GL+M + Q E + + G P ++++++++A Sbjct: 53 FNGINVTIPHKVEVLKYVDVADDLVNEVGAANTL--KIKDGKIYAFNTDVEGVRGSIKDAVDPKGLKVAVLGAGGAARAAVVAL------------------RDEAQVTVFNRTLEKAKRLAEELGVDYAGLNEVDKIKKHD--IIINATPVGMDGV--SMPIPPDVIESRHVLMDMVYRPLYTPFLKVGLAKGAKTVNGLKMLVIQGMESEKVWLGASPYWRDVYERLLA 259
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: AROE_CALS8 (Shikimate dehydrogenase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=aroE PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.500e-16 Identity = 66/216 (30.56%), Postives = 102/216 (47.22%), Query Frame = -2 Query: 229 DFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIED------GLRGRLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGM--ILANTTSIGMQPKVDETP--IPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYE 846 D GF+ TIP+KE ++ CDEV + I A N + ++ KL YNTD++G ++E+ R + +GG + A L+ V +ANRTY++A L E V L + +E + I+ NTTS+GM P ++ +P + G V+D +Y P T L EAE+ G+ +GL+M + QA E Sbjct: 56 DVVGFNITIPYKEDILEFCDEVSEDVRIIQAANTV--KKEGEKLVAYNTDWLGFKRSLEEVGISVKDKRILILGAGGAAKACIYGLY----------------RMGVKEVFVANRTYEKAESLKE-VFQDILKILPVEWLRRYEFKYDIIINTTSVGMFPNIESSPFDFENYVAGIPVFVYDMIYNPPKTTFLEEAEKKGSKTENGLKMLVYQAVE 252
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: AROE_BRUAB (Shikimate dehydrogenase OS=Brucella abortus GN=aroE PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.500e-16 Identity = 73/234 (31.20%), Postives = 108/234 (46.15%), Query Frame = -2 Query: 208 AKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGL-------RGRLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRTYDRARELAETVGG--HALSLADLENFNPEDGMILANTTSIGM--QPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 876 + F + ++N FAG + TIPHKEAA + +D A++IGAVN + +G+L G NTD G + ++ R + +GG S A+ L V + NRT RA ELA G +A S + + G+I+ NTT++GM + + PI A+ D VY P T L +AE++G V GL M + QA +ER+ G Sbjct: 52 SSFAASLAANGFAGGNVTIPHKEAAYAAAESLDEAARAIGAVNTL--WLENGRLCGGNTDAYGFAANLDASAPGWDKADRALVLGAGGASRAVVHALL----------------SRGVCHVSVVNRTLSRAEELAAHFGARVYAHSWDEAQALVSNAGLIV-NTTALGMSGHGEGQDFPIDLTCAPKEAVATDIVYVPLRTAFLNKAEKAGLKTVDGLGMLLHQAVPGFERWFG 266
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: AROE_BRUA2 (Shikimate dehydrogenase OS=Brucella abortus (strain 2308) GN=aroE PE=3 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 1.500e-16 Identity = 73/234 (31.20%), Postives = 108/234 (46.15%), Query Frame = -2 Query: 208 AKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGL-------RGRLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRTYDRARELAETVGG--HALSLADLENFNPEDGMILANTTSIGM--QPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 876 + F + ++N FAG + TIPHKEAA + +D A++IGAVN + +G+L G NTD G + ++ R + +GG S A+ L V + NRT RA ELA G +A S + + G+I+ NTT++GM + + PI A+ D VY P T L +AE++G V GL M + QA +ER+ G Sbjct: 52 SSFAASLAANGFAGGNVTIPHKEAAYAAAESLDEAARAIGAVNTL--WLENGRLCGGNTDAYGFAANLDASAPGWDKADRALVLGAGGASRAVVHALL----------------SRGVCHVSVVNRTLSRAEELAAHFGARVYAHSWDEAQALVSNAGLIV-NTTALGMSGHGEGQDFPIDLTCAPKEAVATDIVYVPLRTAFLNKAEKAGLKTVDGLGMLLHQAVPGFERWFG 266
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: AROE_BRUA1 (Shikimate dehydrogenase OS=Brucella abortus (strain S19) GN=aroE PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.500e-16 Identity = 73/234 (31.20%), Postives = 108/234 (46.15%), Query Frame = -2 Query: 208 AKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGL-------RGRLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRTYDRARELAETVGG--HALSLADLENFNPEDGMILANTTSIGM--QPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 876 + F + ++N FAG + TIPHKEAA + +D A++IGAVN + +G+L G NTD G + ++ R + +GG S A+ L V + NRT RA ELA G +A S + + G+I+ NTT++GM + + PI A+ D VY P T L +AE++G V GL M + QA +ER+ G Sbjct: 52 SSFAASLAANGFAGGNVTIPHKEAAYAAAESLDEAARAIGAVNTL--WLENGRLCGGNTDAYGFAANLDASAPGWDKADRALVLGAGGASRAVVHALL----------------SRGVCHVSVVNRTLSRAEELAAHFGARVYAHSWDEAQALVSNAGLIV-NTTALGMSGHGEGQDFPIDLTCAPKEAVATDIVYVPLRTAFLNKAEKAGLKTVDGLGMLLHQAVPGFERWFG 266
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: YDIB_ECO5E (Quinate/shikimate dehydrogenase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=ydiB PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.960e-16 Identity = 69/240 (28.75%), Postives = 117/240 (48.75%), Query Frame = -2 Query: 172 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDG---LRGRLNV---SGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRT---YDRARELAETVGGHA------LSLADLENFNPE--DGMILANTTSIGMQPKVDETPIPKHALGHYAL-VFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIM 837 G ++P+K+ A + DE+ AK +GA+N I+ DG L GYNTD G I AI++ ++G+ V +GG S+A+ + + + + NR +D+A A+ V + LAD + F IL N T +GM+P +++ + +L H L V + VY P +T+LL++A+++G + G M + Q EQ+ +TG P E +++M Sbjct: 63 GTGVSMPNKQLACEYVDELTPAAKLVGAINTIVN--DDGYLRGYNTDGTGHIRAIKESGFDIKGKTMVLLGAGGASTAIGAQGAI----------------EGLKEIKLFNRRDKFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILTNGTKVGMKPLENKSLVNDISLLHPGLLVTECVYNPHMTKLLQQAQQAGCKTIDGYGMLLWQGAEQFTLWTGKDFPLEYVKQVM 284
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: YDIB_ECO57 (Quinate/shikimate dehydrogenase OS=Escherichia coli O157:H7 GN=ydiB PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.960e-16 Identity = 69/240 (28.75%), Postives = 117/240 (48.75%), Query Frame = -2 Query: 172 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDG---LRGRLNV---SGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRT---YDRARELAETVGGHA------LSLADLENFNPE--DGMILANTTSIGMQPKVDETPIPKHALGHYAL-VFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIM 837 G ++P+K+ A + DE+ AK +GA+N I+ DG L GYNTD G I AI++ ++G+ V +GG S+A+ + + + + NR +D+A A+ V + LAD + F IL N T +GM+P +++ + +L H L V + VY P +T+LL++A+++G + G M + Q EQ+ +TG P E +++M Sbjct: 63 GTGVSMPNKQLACEYVDELTPAAKLVGAINTIVN--DDGYLRGYNTDGTGHIRAIKESGFDIKGKTMVLLGAGGASTAIGAQGAI----------------EGLKEIKLFNRRDKFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILTNGTKVGMKPLENKSLVNDISLLHPGLLVTECVYNPHMTKLLQQAQQAGCKTIDGYGMLLWQGAEQFTLWTGKDFPLEYVKQVM 284
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: AROE_UNCMA (Shikimate dehydrogenase OS=Uncultured methanogenic archaeon RC-I GN=aroE PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.960e-16 Identity = 77/227 (33.92%), Postives = 106/227 (46.70%), Query Frame = -2 Query: 178 FAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRTYDRARELAETVGGHA----LSLADL-ENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQK 843 F G + TIPHKEAA++ E D A IGA N + +Q + +NTD GAI A+ DG GV L K +V+ A V IANRT +A +LA + SL L E D I+ NTT IGM + D+ + + L VFD VY P T LLREA +GA + G+ M Q + +E +TG+ P ++ ++ Sbjct: 56 FGGLNVTIPHKEAALRIM-EPDRTALEIGAANTLDFKQ----MRAFNTDAAGAIDALRDG---------GVE--LENKGVLVLGAGGAARAVVYGLVKEGATVTIANRTTAKAADLAAYMRSFGSVFGTSLDSLGEKVRAVD--IVINTTPIGMGWE-DKPLVTRDMLDRSQAVFDLVYRPVETPLLREARAAGAKTIDGISMLARQGAKSFEIWTGVKPPVDVMER 263 The following BLAST results are available for this feature:
BLAST of CN191732 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 265
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Sequences
The
following sequences are available for this feature:
EST sequence >CN191732 ID=CN191732; Name=CN191732; organism=Citrus sinensis; type=EST; length=880bpback to top |