CN191732
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: AROE_BACCN (Shikimate dehydrogenase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=aroE PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.815e-23 Identity = 77/223 (34.53%), Postives = 116/223 (52.02%), Query Frame = -2 Query: 205 AGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIE----DGLRGR---LNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRTYDRARELA----ETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 840 +G + T PHK A +K DE+D +AK IGAVN ++ R +GKL GYNTD +G + +++ + LR + L +GG A+ L + IANRT + A++L E V ALSL E+ +L TT+IGM P V TP+ +L A+V D +Y P T+ L +A+ SGA + +G++MF+ Q +E +TG+ Sbjct: 57 SGINVTTPHKVAIMKYLDEIDPLAKQIGAVNTVVHR--NGKLVGYNTDGIGYVRSLQAISKEPLRHKRMLLLGAGGACRAIYCSLVAA----------------GVKEIDIANRTVETAKQLIASSKERVVSKALSLEKATEAQ-ENYDVLIQTTTIGMHPHVQHTPMQIGSLKQGAIVSDIIYNPFETKFLHDAKLSGAIVQNGIDMFVYQGALAFEMWTGM 260
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: AROE_METAC (Shikimate dehydrogenase OS=Methanosarcina acetivorans GN=aroE PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 8.214e-23 Identity = 82/234 (35.04%), Postives = 118/234 (50.43%), Query Frame = -2 Query: 178 FAGFSCTIPHKEAAVKCCDEV--DTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDG---LRGRLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRTYDRARELAETVGGHAL-------SLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQK 843 F G + T+P KE A+K D + D +A+ IGAVN ++ ++ G++ GYNTD +GA A+ + +RG V G A F + + + NRT +RA ELA+ V +L L+ L+ D IL NTT++GM P D T L VFD VY P TRLL+EA+ +GA VSG+ M + Q E ++ +TG+ AP EL +K Sbjct: 56 FGGLNLTVPLKEEALKL-DFIRPDPLAERIGAVNTVVFSET-GEIRGYNTDGLGARQALLEAAVEIRGSKVVVAGAGGAARAVAFQLAADGA--------------EITVVNRTEERAVELAKDVAAASLPGKINGTGLSGLKELL-RDADILINTTTLGMHPNTDTTIATAEELHSGLTVFDIVYNPLETRLLKEAKVAGAKTVSGVLMLVYQGAEAFKLWTGVEAPAELMKK 272
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: AROE_THETN (Shikimate dehydrogenase OS=Thermoanaerobacter tengcongensis GN=aroE PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.390e-22 Identity = 71/222 (31.98%), Postives = 112/222 (50.45%), Query Frame = -2 Query: 208 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTD---YVGAISAIEDGLRGRLNV---SGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRTYDRARELAETVGGHA------LSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 837 GF+ T+PHKE+ + D V A+ IGAVN ++ +G L GYNTD ++ ++ +++ +RGR +GG S A+ L +VIANRT ++A+ LAE + S+ ++E FN D IL NTTS+GM P+V +P+ + + V+D +Y P T L+ A ++G +GL M + QA + +TG Sbjct: 63 GFNVTVPHKESVMNYLDFVTEEAEKIGAVNTVVNE--NGILKGYNTDVQGFIDSLKELKEDVRGRKAFVLGAGGASKAICFAL----------------AREGVESIVIANRTLNKAKALAEYIREEFKMKCDYCSIEEVEKFNEID--ILINTTSVGMHPEVGNSPVSEEVVAKANFVYDLIYNPSETLFLKYARKNGVKSANGLSMLVNQASYAFYLWTG 264
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: AROE_EXIS2 (Shikimate dehydrogenase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=aroE PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 9.081e-22 Identity = 76/236 (32.20%), Postives = 111/236 (47.03%), Query Frame = -2 Query: 166 FFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGK-LFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAK 870 F Q F G + TIPHK A + D ++ A GAVN + DG+ L G NTD G A+ + ++ G A G + ++ V + NRT A ++A G A+ + + P D ++ NTTS+GM P +D+TPI A AL+ D +Y P TRLLREA +G + G+ MF+ QA E +ERFTG L ++++ K Sbjct: 45 FVQKVRKRQFDGINVTIPHKSAIIPFLDRLEPAAARAGAVNTVYW---DGEELVGANTDGTGFARALATWTNAKNSLVIGAGGAARGIIPML-----------------PGHVTVMNRTNQTAEQVAAEFGQSAVPWSRTLDLTPYD--VIINTTSVGMAPAIDQTPIELTATT--ALICDIIYRPTPTRLLREATANGLDTLDGVLMFVLQAAEAFERFTGHKPDIALGEQVIRK 256
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: AROE_STAES (Shikimate dehydrogenase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=aroE PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.549e-21 Identity = 74/225 (32.89%), Postives = 111/225 (49.33%), Query Frame = -2 Query: 205 SSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTD---YVGAISAIEDGLRGRLNV---SGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRTYDRARELAETVGGHALSLAD--LENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 855 S GF+ TIPHKE + D+++ AKS+GAVN ++ + DGK GYNTD YV + I +G+ + +GG S +A +L+ ++ + +ANRT R + + LS A+ L+ F+ I+ NTT GM D I + L + LV D VY P T +L EAE+ G I +GL+MF+ Q E ++ +T L Sbjct: 53 SEKSIDGFNVTIPHKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDGIGYVNGLKQIYEGIEDAYILILGAGGASKGIANELYKIVRPT----------------LTVANRTMSRFNNWSLNINKINLSHAESHLDEFD-----IIINTTPAGMNGNTDSV-ISLNRLASHTLVSDIVYNPYKTPILIEAEQRGNPIYNGLDMFVHQGAESFKIWTNL 253
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: AROE_STAEQ (Shikimate dehydrogenase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=aroE PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.549e-21 Identity = 74/225 (32.89%), Postives = 111/225 (49.33%), Query Frame = -2 Query: 205 SSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTD---YVGAISAIEDGLRGRLNV---SGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRTYDRARELAETVGGHALSLAD--LENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 855 S GF+ TIPHKE + D+++ AKS+GAVN ++ + DGK GYNTD YV + I +G+ + +GG S +A +L+ ++ + +ANRT R + + LS A+ L+ F+ I+ NTT GM D I + L + LV D VY P T +L EAE+ G I +GL+MF+ Q E ++ +T L Sbjct: 50 SEKSIDGFNVTIPHKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDGIGYVNGLKQIYEGIEDAYILILGAGGASKGIANELYKIVRPT----------------LTVANRTMSRFNNWSLNINKINLSHAESHLDEFD-----IIINTTPAGMNGNTDSV-ISLNRLASHTLVSDIVYNPYKTPILIEAEQRGNPIYNGLDMFVHQGAESFKIWTNL 250
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: AROE_BACSK (Shikimate dehydrogenase OS=Bacillus clausii (strain KSM-K16) GN=aroE PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 2.023e-21 Identity = 68/233 (29.18%), Postives = 114/233 (48.93%), Query Frame = -2 Query: 172 QTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIM 864 +T + GF+ TIPHK A + DE+D A+++GAVN ++ + DG+ G NTD G I ++ + + +L G+ +VI A + ++NRT ++A+ELA+ + L G +L NTTS+GM P + PI L +V D +Y P T LL+EA++ G I++G+ MF+ Q E +TG ++ ++++ Sbjct: 49 RTMKAQGIDGFNVTIPHKVAIIDYLDEIDEDAEAMGAVNTVVCQ--DGRWVGKNTDADGYIESLLPVVSDQ---------SLTGRRVLVIGAGGAARAVIHALGKQRATISVSNRTAEKAQELAQLFSHLTIEAIPLNEAESTLGTYDVLINTTSVGMYPDTSKQPIALDRLKQATIVSDLIYNPYETALLQEAKQRGNRILNGIGMFVNQGALSIEHWTGRKPNRKCMERVV 270
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: AROE_NATPD (Shikimate dehydrogenase OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=aroE PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.642e-21 Identity = 85/221 (38.46%), Postives = 105/221 (47.51%), Query Frame = -2 Query: 190 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIE--DGLRGRLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRTYDRARELAETVG---GHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKE 837 G + TIP KE + E D +A+ IGAVN I +G+ G+NTD G I A + D R V G A F + V IANRT RA LA V GH L +L P D +L N TS+GM+ DETP+PK L V DAVY P TRLLREA+ +GAT + G M + Q E +E +TG AP E Sbjct: 57 GLNVTIPFKEDVLDVV-EPDPLAERIGAVNTI---DFEGEPTGHNTDAAGVIRAFQHHDVERSGTAVVVGAGGAGRAAAFALADEGM--------------EVHIANRTVSRATALATEVPDATGHGLD--ELAELVP-DADVLVNATSVGME--ADETPVPKRHLHEGLAVLDAVYAPLETRLLREADAAGATTIDGAWMLLFQGVEAFEIWTGKAAPVE 254
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: AROE_ALKOO (Shikimate dehydrogenase OS=Alkaliphilus oremlandii (strain OhILAs) GN=aroE PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.642e-21 Identity = 75/239 (31.38%), Postives = 122/239 (51.05%), Query Frame = -2 Query: 172 FAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIED-GLRGRLNV-----SGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRTYDRARELAETVGGHA----LSLADLENFN----PEDGMILANTTSIGMQPKVDETPIPKH-ALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIM 843 F GF+ T+PHK + DEV AK IGAVN ++ + +GKL G+NTD G + ++ED G+ + +GG + ++A +L + ++ I NRT D+A ++A+ +G + + LEN E+ +L NTTS+GM +E+ I + L +V D +Y P T+LL++AE G ++GL M IGQA +E +T + P + +K + Sbjct: 63 FRGFNVTMPHKREVMNYLDEVSENAKIIGAVNTVVNQ--NGKLVGHNTDGKGYVQSLEDEGIYVKEKTFVIAGAGGAARSVAVQLAL----------------DGAKKITILNRTIDKAHDIAQLIGMSIPNVHIEINCLENKTLAKAVEEADVLINTTSLGMYSMEEESIIGEEKVLPSNLVVSDLIYNPAKTKLLQQAESRGCKTINGLGMLIGQAAIAFELWTEVAMPIDYIKKTL 283
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: AROE_METST (Shikimate dehydrogenase OS=Methanosphaera stadtmanae (strain DSM 3091) GN=aroE PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.451e-21 Identity = 79/239 (33.05%), Postives = 114/239 (47.70%), Query Frame = -2 Query: 163 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIED--GLRGRLNV----SGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRTYDRARELAETVGGHA-LSLADLENFNPEDGMI-----LANTTSIGMQPKVDET--PIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAKY 837 G + TIPHK + DE+D A+ IGAVN I DG GYNTD +GAI +IE L+ + N+ +GG S A+ L ++++ANR+ D A++L + D N D +I + NTT IGM PK DE PI + V D +Y P T+LL+++++ GAT + G M I Q + +E FTG E F+K + K+ Sbjct: 62 GLNVTIPHKTTIIPYLDEIDETAEKIGAVNTI--NFKDGIAKGYNTDGIGAIVSIEKYTSLKDK-NIMIIGAGGASKAITFTLL----------------NKNINQLIVANRSKDNAQKLITNLKNQTNFENIDFINIKKTDNVIDDVDIIINTTPIGMYPK-DEVAPPIKTDKISSKHTVMDIIYNPLETQLLKQSKKQGATTIPGTHMLINQGIKAFEIFTGKTPSYESFEKPLLKH 280 The following BLAST results are available for this feature:
BLAST of CN191732 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 265
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Sequences
The
following sequences are available for this feature:
EST sequence >CN191732 ID=CN191732; Name=CN191732; organism=Citrus sinensis; type=EST; length=880bpback to top |