CN191732
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: AROE_METMP (Shikimate dehydrogenase OS=Methanococcus maripaludis GN=aroE PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.110e-19 Identity = 71/226 (31.42%), Postives = 115/226 (50.88%), Query Frame = -2 Query: 205 DFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIED--GLRGRLNV----SGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRTYDRARELAETVG-----GHALSLADLENFNPEDGMILANTTSIGMQPKVDETP-IPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 846 +F GF+ TIPHK +K DE+D A++IGAVN + + +GK GYNTD +G A+E+ G+ N+ SGG S A++ +L + I NR ++A L++ + + L+ L+ N E+ I+ NTT +GM P + P IP + + A+V D +Y P L+EA++ GA ++G+ M + Q +E +TG+ Sbjct: 59 NFRGFNITIPHKMNIMKYLDEIDCDAEAIGAVNTV--KIENGKAIGYNTDGIGVKKALEEKTGILINKNILIIGSGGASRAVSFEL------------------AKDNNLTIVNRNIEKAENLSKEISRKLKKENPLNYGGLD-INIENFDIIINTTPVGMYPHTEVEPVIPLNNIKKDAVVMDLIYNPLEPVFLKEAKKYGAKTINGIGMLVYQGAVSFEIWTGI 263
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: AROE_SILST (Shikimate dehydrogenase OS=Silicibacter sp. (strain TM1040) GN=aroE PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.450e-19 Identity = 73/221 (33.03%), Postives = 108/221 (48.87%), Query Frame = -2 Query: 208 FAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGL------RGRLNV--SGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRTYDRARELAETVGGHALSLADLENFNP-EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 843 F G + TIPHK++ ++ D+V AK +GA N +I + DG + NTD G I+ + +G G V +GG S A+ L + + NRT RA+E+A+T G ++ +E N ED ++ NTTS+GM + +P L +V D VY P T LL+ AEE+G T+V GL M + QA +ER+ G Sbjct: 60 FVGANVTIPHKQSIMEIADKVTDRAKLMGAANTLIFHE-DGAIVADNTDGYGFITNLHEGAPDWDAKSGPATVFGAGGASRAVIASLIEA----------------GVPEIRLTNRTRSRAKEVAQTFGSKVTAVDWVEAGNVIEDASLVVNTTSLGMTGQ-RRLRVPLDGLHSGIVVTDLVYNPLKTELLQAAEEAGCTVVDGLGMLLHQAVPGFERWFG 262
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: AROE_METM6 (Shikimate dehydrogenase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=aroE PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.450e-19 Identity = 75/228 (32.89%), Postives = 115/228 (50.44%), Query Frame = -2 Query: 208 AGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIED--GLRGRLNV----SGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRTYDRARELAE----------TVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETP-IPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 840 AGF+ TIPHK +K DE+D AKSIGAVN + + +GK GYNTD +G A+E+ G+ N+ SGG S A++ +L + I NR ++A+ L+E ++ AL++ D++NF+ I+ NTT +GM P D P IP + + A+V D +Y P L+EA + G ++GL M + Q ++ +TG Sbjct: 61 AGFNVTIPHKINIMKYLDEIDEDAKSIGAVNTV--KIENGKTIGYNTDGIGVKRALEEKSGILINKNILIIGSGGASRAVSFEL------------------AKENNLTIVNRNIEKAKILSEELSTKLKKENSIKYGALNI-DIKNFD-----IIINTTPVGMYPDTDVNPVIPLNDIKKSAVVMDLIYNPLEPVFLKEAMKYGVETINGLGMLVYQGAVSFQIWTG 262
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: AROE_SINMW (Shikimate dehydrogenase OS=Sinorhizobium medicae (strain WSM419) GN=aroE PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.894e-19 Identity = 78/230 (33.91%), Postives = 111/230 (48.26%), Query Frame = -2 Query: 172 FAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRTYDRARELAETVGG--HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPK---HALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL-PAPKELFQKIM 843 F G + TIPHKEAA + D D ++ +GA N + +G + NTD G ++ +++ +G +S V G VI + + NRT +RARELA+ G HA S+A L G+ + NTTS+GM D P P L A+V D VY P T LLR+AEE G +V GL M + QA +E++ GL P E ++I+ Sbjct: 65 FCGGNVTIPHKEAAFRLSDRPDELSAELGAANTLWLE--NGTIRATNTDGRGFVANLDERAKGWDRISAAVILGAGGASRAVIQAIRDRGVKA---------IHVVNRTPERARELADRFGSAVHAHSMAALPEVLSGAGLFV-NTTSLGM----DGEPAPAIDFSKLARDAVVTDIVYVPLKTPLLRQAEEQGFRVVDGLGMLLHQAAPGFEKWFGLRPVVDEALREII 278
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: AROE_DEHSC (Shikimate dehydrogenase OS=Dehalococcoides sp. (strain CBDB1) GN=aroE PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.894e-19 Identity = 75/232 (32.33%), Postives = 109/232 (46.98%), Query Frame = -2 Query: 178 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDG----LRGRLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRTYDRARELAETV--------GGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQK 837 G + TIPHK +K D +D AK IGAVN I+ +G+L GYNTD+ G + +E + R + G SA A L + + + R ++A++LA + G L+ A+LE E +I+ N T IGM ++ IP L V DA+Y P TRLL +AE+ GA I++GLEM + Q +E +T AP + K Sbjct: 62 GLNVTIPHKIEVIKYIDTLDPAAKKIGAVNTIVNE--NGQLKGYNTDFGGFVRLLEHNRIAPAKHRFALLGAGGSAHAISLAICTLGG---------------HLTVLARQEEKAKDLAAKMCLRFKGKAQGLELNEANLEETLAESDIIV-NCTPIGMGNLAGQSLIPPRLLRPDLTVIDAIYNPCKTRLLEDAEKKGAKIINGLEMLVWQGAMSFEIWTSQKAPFRVMMK 275
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: AROE_SALRD (Shikimate dehydrogenase OS=Salinibacter ruber (strain DSM 13855) GN=aroE PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.473e-19 Identity = 76/230 (33.04%), Postives = 110/230 (47.83%), Query Frame = -2 Query: 202 FAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIE----DGLRGRLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRTYDRARELAETVGGH----ALSLADLEN--FNPEDGMILANTTSIGMQP-KVDETPIPK---HALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFT--GLP 843 F G + T PHKEA + DEV A+++GAVN I+R G+L G NTD G + +E D L G + G A ++ ++ R+ I R D+A LA + H AL ++ E + ++ N T +GM P + +TP P H +V+D VYTP+ TRLLREA GAT + GL+M + QA Y ++T G+P Sbjct: 61 FLGANVTTPHKEAVLPVLDEVTERARAVGAVNTIVR--DGGRLHGDNTDIAGFLRPLEERGGDALEGAPMLVFGAGGAARAVVYGLLSHYRPE------------RLTIVARRPDQAEGLAADLAAHDPDGALRVSSFEEAALSVRTSRLVVNATPLGMAPDRRGQTPWPNPVDFTADH--VVYDLVYTPEETRLLREAAAEGATPIGGLDMLVEQAAAAYRQWTDRGMP 274
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: AROE_CLOPE (Shikimate dehydrogenase OS=Clostridium perfringens GN=aroE PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.473e-19 Identity = 65/227 (28.63%), Postives = 107/227 (47.14%), Query Frame = -2 Query: 157 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAKY*C 837 G + TIP+KE + D + AK IGAVN I+ + DGK +GYNTDY G +E R ++N+ G FV+ ++V+ +R ++A + + + +S +LE N E +I NTT GM P + + + + + + D VY P T+ L+ A+++G V GL M +GQ + E + G+ K ++I + C Sbjct: 57 GANVTIPYKEKVMDQLDIISHEAKVIGAVNTILIK--DGKSYGYNTDYYGFGKMLE---RAKVNIEGN-------SFFVLGAGGAARSILKYLEDSKAKKIVLVSRDKEKAFKKFKDFNINFMSYGELEEINEEFALI--NTTPCGMYPNTNSVAVSEKVIKKFKVAVDIVYNPLETKFLKMAKDNGLKTVDGLFMLVGQGVKAEEIWNGIKVDKSTEEEIYEELKC 269
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: AROE_DEHE1 (Shikimate dehydrogenase OS=Dehalococcoides ethenogenes (strain 195) GN=aroE PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.230e-19 Identity = 73/234 (31.20%), Postives = 110/234 (47.01%), Query Frame = -2 Query: 178 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDG----LRGRLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRTYDRARELAETVGGHALSLA------DLENFNPEDGM----ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQK 837 G + TIPHK +K D +D A+ IGAVN I+ +G+L GYNTD+ G + +E + R + G SA A L V + + R ++A++LA G L L+ +L + N E+ + ++ N T +GM ++ +P L V DA+Y P TRLL +AE+ GA I++GLEM + Q +E +T AP L K Sbjct: 62 GLNVTIPHKIEVIKYIDSLDPAAEKIGAVNTIVNE--NGRLKGYNTDFGGFVRLLEHNRIAPAKQRFTLLGAGGSAHAIALAVC---------------NLGGHLTVLARQEEKAKDLA---GKMCLRLSGKTQGLELNDTNLEEALADTDVIVNCTPVGMGNLAGQSLVPPRLLRPDLTVIDAIYNPCKTRLLEDAEKRGARIINGLEMLVWQGAMSFEIWTNQKAPFRLMMK 275
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: AROE_RHISN (Shikimate dehydrogenase OS=Rhizobium sp. (strain NGR234) GN=aroE PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 4.218e-19 Identity = 78/233 (33.48%), Postives = 112/233 (48.07%), Query Frame = -2 Query: 166 FAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRTYDRARELAETVGG--HALSLADLENFNPEDGMILANTTSIGMQ----PKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL-PAPKELFQKIMAK 843 F G + TIPHKE A + D D ++ +GA N + DG++ NTD G ++ +++ G +S V G VI + + NRT RA+ELA+ G HA +A L G+ + NTTS+GM P +D +P L + A+V D VY P T LLR+AEE G IV GL M + QA +E++ GL P E ++I+ K Sbjct: 65 FCGGNVTIPHKEMAFELSDRPDELSAELGAANTLWLE--DGRICATNTDGRGFVANLDERASGWDRISTAVILGAGGASRAVIQAVRDRGVKT---------IHVVNRTAARAQELADRFGRAVHAHPIAALSEVMAGAGLFV-NTTSLGMDGEPAPAIDFSP-----LANGAVVTDIVYVPLKTPLLRQAEEQGYRIVDGLGMLLHQAAPGFEKWFGLRPVVDETLRQIIIK 280
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: AROE_PYRKO (Shikimate dehydrogenase OS=Pyrococcus kodakaraensis GN=aroE PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.509e-19 Identity = 74/226 (32.74%), Postives = 109/226 (48.23%), Query Frame = -2 Query: 181 AGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIE-----DGLRGRLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRTYDRARELAET-VGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQ 840 +G + T+PHKEA + D + + IG+VN ++ R+ G+L G+ TD +GA A+E G R + +GG A+A +L VV+ NRT ++A+ L + G AL+ +L + E +L N TS+GM ETP+P L +V D VY P TRLL EAE G V GL M + Q E + +TG + L + Sbjct: 61 SGLNVTMPHKEAVIHFLDSLSEDSGEIGSVNTVVNRK--GRLEGHTTDGLGARRALERAIELGGRRILIIGAGGAGKAIAYEL------------------SRDNEVVVLNRTPEKAKALERFGITGDALNRENLGEYL-EWAEVLINATSVGMNSW--ETPVPAELLRRDLVVMDIVYKPLKTRLLTEAELRGCKTVDGLWMLVYQGIESFRLWTGFKPDEGLMR 263 The following BLAST results are available for this feature:
BLAST of CN191732 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 265
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Sequences
The
following sequences are available for this feature:
EST sequence >CN191732 ID=CN191732; Name=CN191732; organism=Citrus sinensis; type=EST; length=880bpback to top |