CN191732
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: AROE_DESRM (Shikimate dehydrogenase OS=Desulfotomaculum reducens (strain MI-1) GN=aroE PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.509e-19 Identity = 70/244 (28.69%), Postives = 118/244 (48.36%), Query Frame = -2 Query: 166 SNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLR----GRLNV---SGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRTYDRARELAETVGGHALSLADLENFNPE-------DGMILANTTSIGMQPKVDETP-IPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAK 852 S + AG + T+PHK+ + DE++ A+ IGAVN I+ ++GKL GYNTD G + A+ + R G+ + +GG + A+A +L + + I NR ++A ELA + + A + + + ++ T +GM P+VD+ P P L LV D +Y P+ T LR A+ G+ ++GL M + Q +E +TG AP ++ + ++ K Sbjct: 61 SLNMAGVNVTVPHKQRVMPFLDELEPAARIIGAVNTIVN--NNGKLVGYNTDGKGFVRALTEEARFNPLGKSAILIGAGGAARAVAVQLAL----------------SGLRTIYITNRNQEKAEELARDILESTDTSASMIPWGNNLLGKRMVEVDLVVQATPLGMSPEVDQVPEFPFQMLTPQHLVCDLIYNPEQTCFLRRAKSRGSKTMNGLAMLLYQGVLAFELWTGFTAPVDVMRNVLHK 286
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: AROE_MACCJ (Shikimate dehydrogenase OS=Macrococcus caseolyticus (strain JCSC5402) GN=aroE PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.227e-18 Identity = 70/233 (30.04%), Postives = 110/233 (47.21%), Query Frame = -2 Query: 163 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV---SGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMI-----LANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAKY 837 GF+ TIP+K ++ D VD A+ IGA+N + DG +GYNTD G ++IE G+ V +GG S A+ LF +V + NR +R + + D + DG+I + NTT +GM+ + +T I L A+V D +YTP T +L+ A + G ++++GL+MF+ Q YE +TG A K ++ + Y Sbjct: 56 GFNITIPYKVDMLQVVDVVDIKAQMIGAINTV--HIEDGIWYGYNTDGAGFKASIEKYTGGKNIVILGAGGASRAICYTLF------------------KDNKVTVLNRNTNRVADWPFQI--------DAYTYEESDGVIQQADIVINTTPVGMEGFMPDTLIDISQLKSSAVVCDIIYTPDKTPILQSAAQRGLSVINGLDMFVNQGALSYEIWTGKKANKAAMKQAVINY 260
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: AROE_METBU (Shikimate dehydrogenase OS=Methanococcoides burtonii (strain DSM 6242) GN=aroE PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.603e-18 Identity = 75/222 (33.78%), Postives = 111/222 (50.00%), Query Frame = -2 Query: 178 FAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQK 843 F G + T+P KE A+K D D++A IGA+N I + DG + GYNTD +GA IED GV + K +++ A V IANRT +RA +LA +G D+ + ED IL NTT++G+ + T + + VFD VY P +T+LL+EAE +GA ++G+ M + Q E + +TG P + +K Sbjct: 56 FGGLNLTVPLKETALKFVD-ADSLAAKIGAINTIDFK--DG-IKGYNTDGIGAKRTIEDE---------GVD--IKDKNVLILGAGGAARAIAFTFAEAGANVNIANRTPERAMQLAAEIGDAKGYGLDIVDNGLEDIDILINTTTVGLGNS-NGTLVTAEQMHSDLAVFDIVYNPLMTKLLQEAETAGARPITGIMMLVYQGAEAFRIWTGKEPPINVMKK 261
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: AROE_AZOC5 (Shikimate dehydrogenase OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=aroE PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.603e-18 Identity = 73/230 (31.74%), Postives = 110/230 (47.83%), Query Frame = -2 Query: 205 FFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRG-----RLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRTYDRARELAETVGGHALSLA-DLENFNPEDGMILANTTSIGM--QPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 870 FF ++ +AG + TIPHKE A E D VA+++G N + DG+LFG NTD G +S ++ G R+ + G A L+ + +V++ANRT RA LA G + + D + + ++ ++ANTTS+GM QP +D + L A+V D VY P T LL+ A+ G V GL M + QA + R+ G+ Sbjct: 46 FFARFAEQGYAGGNVTIPHKEVAFNALAEADPVARALGVANTL--WLEDGRLFGANTDAPGFLSNLDVTAPGWDANPRVALVLGAGGASRAVLYGFL-------------QRGFDKVLLANRTLARAEALAAHFGPRVVPIGWDGVSASLKEAQVVANTTSLGMKGQPPLD---LDLSVLADDAVVADVVYVPLETPLLKAAKARGLRTVDGLGMLLHQAVPGFARWFGV 257
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: AROE_THET2 (Shikimate dehydrogenase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=aroE PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.094e-18 Identity = 74/218 (33.94%), Postives = 103/218 (47.25%), Query Frame = -2 Query: 205 FAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDG---LRGRLNV--SGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 843 F G + T+P KEAA+ D V A+ IGAVN ++ Q +G+LFG+NTD G + A++ G L+G V +GG A+A L V + NRT RA LAE G A+ L + +L N T +G++ +P+P L V D VY P TR LREA+E G + +GL M Q + +TGL Sbjct: 54 FRGVNLTLPLKEAALAHLDWVSPEAQRIGAVNTVL--QVEGRLFGFNTDAPGFLEALKAGGIPLKGPALVLGAGGAGRAVAFAL-----------------REAGLEVWVWNRTPQRALALAEEFGLRAVPLE-----KAREARLLVNATRVGLEDP-SASPLPAELLPEEGAVVDLVYRPLWTRFLREAQERGLKVQTGLPMLAWQGALAFRLWTGL 246
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: AROE_SYMTH (Shikimate dehydrogenase OS=Symbiobacterium thermophilum GN=aroE PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.094e-18 Identity = 76/234 (32.48%), Postives = 117/234 (50.00%), Query Frame = -2 Query: 181 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIED-GLR--GRLNV---SGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRTYDRARELAETVGGHALSL-ADLENFNPEDGM-------ILANTTSIGMQPKVDETPIPKHAL-GHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQ 837 G + TIPHKEA + D+V A+ +GAVN I+ R G+L GYNTD G + ++E+ G+R GR V +GG + A+A L + AR+ I NR+ RA LA + + A++ + E+ ++ N T +GM+P + TP+ L + +V+D VY P TRLLREA + G V+GL M + Q +E + G P ++ + Sbjct: 68 GVNVTIPHKEAVMAYLDDVAPTARQVGAVNTIVNR--GGRLIGYNTDGWGFLLSLEERGVRVAGRNAVVLGAGGAARAVALHLGMA----------------GVARLTIINRSRQRAEFLAADLARAKTPVRAEVADPGSEEARAALAEAGLVVNCTPLGMEPDTESTPLEDVGLLPAHCVVYDTVYRPLETRLLREARQHGLITVNGLAMLVHQGACAWEYWFGRRGPVDVMR 283
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: AROE_DEHSB (Shikimate dehydrogenase OS=Dehalococcoides sp. (strain BAV1) GN=aroE PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.734e-18 Identity = 73/232 (31.47%), Postives = 108/232 (46.55%), Query Frame = -2 Query: 178 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDG----LRGRLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRTYDRARELAETV--------GGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQK 837 G + TIPHK +K D +D AK IGAVN I+ +G++ GYNTD+ G + +E + R + G SA A L + + + R ++A++LA + G L+ A+LE E +I+ N T IGM ++ I L V DA+Y P TRLL +AE+ GA I++GLEM + Q +E +T AP + K Sbjct: 62 GLNVTIPHKIEVIKYIDTLDPAAKKIGAVNTIVNE--NGQMKGYNTDFGGFVRLLEHNRIAPAKHRFALLGAGGSAHAISLAICTLGG---------------HLTVLARQEEKAKDLAAKMCLRFKGKAQGLELNEANLEETLAESDIIV-NCTPIGMGNLAGQSLISPRLLRPDLTVIDAIYNPCKTRLLEDAEKKGAKIINGLEMLVWQGAMSFEIWTSQKAPFRVMMK 275
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: AROE_BACSU (Shikimate dehydrogenase OS=Bacillus subtilis GN=aroD PE=3 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 2.734e-18 Identity = 68/217 (31.34%), Postives = 104/217 (47.93%), Query Frame = -2 Query: 208 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTD---YVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRTYDRARELAETVGG----HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 837 G + T+PHK + + D +D AK +GAVN + RR+ D KL GYNTD +V ++ + D L+ + A +F I + I NRT ++A+ L E LS+ + E E ++ +TTS+GM P VD+ P+ A+V D VY P T LL+EA + G + G+ MF+ QA ++ +TG Sbjct: 58 GINVTVPHKVSIMDYLDHIDESAKVLGAVNTV-RREGD-KLVGYNTDGEGFVKSLMKVLDKPISELSFLMIGAGGAARAIFTTIVRNTPK------------KFDICNRTLEKAKRLTEATPSFHNKEVLSIKEAEE-RLEQYDVIIHTTSVGMYPNVDDVPLSLQRAASSAVVCDIVYNPIQTALLKEASQKGLKTLDGVGMFVEQAALSFQLWTG 259
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: AROE_STAS1 (Shikimate dehydrogenase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=aroE PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.571e-18 Identity = 76/235 (32.34%), Postives = 110/235 (46.81%), Query Frame = -2 Query: 163 AGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAI-------EDGLRGRLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRTYDRARELAETVGGHALSLAD--LENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAKY 840 +GF+ TIPHKE + DE+D +K++GAVN + + DGK GYNTD +G ++ + ED L +GG S LA +L + ++ +ANR+ DR V +L A+ L F+ I+ NTT GM E I L + LV D VY P T +L AE G I +GL+MF+ Q E Y +TG ++ + + KY Sbjct: 55 SGFNVTIPHKERIIPYLDEIDEQSKTVGAVNTV--KIVDGKWIGYNTDGIGYVTGLRQVYPDLEDAYILILG-AGGASKGLANELKKFVRP----------------KLTVANRSMDRFESWQLEVNKISLQEAEAALSEFD-----IIINTTPAGMNQN-KEVIINLDNLDSHTLVSDIVYVPFKTPILEIAEAKGNPIHNGLDMFVYQGAESYRIWTGELPQIQIMKDTVLKY 264
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: AROE_CLOPS (Shikimate dehydrogenase OS=Clostridium perfringens (strain SM101 / Type A) GN=aroE PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.571e-18 Identity = 62/227 (27.31%), Postives = 106/227 (46.70%), Query Frame = -2 Query: 157 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAKY*C 837 G + TIP+KE + D + AK+IGAVN I+ + DGK +GYNTDY G +E R ++++ G FV+ ++V+ +R ++ + + + +S +LE + E +I NTT GM P + + + + + + D VY P T+ L+ A+++G V GL M +GQ + E + G+ K + I + C Sbjct: 57 GANVTIPYKEKVMNQLDIISHEAKAIGAVNTILIK--DGKSYGYNTDYYGFGKMLE---RAKVDIEGN-------SFFVLGAGGAARSILKYLEDSKAKKIVLVSRDKEKVFKKFKDFNINFMSYGELEEIHEEFALI--NTTPCGMYPNTNSVAVSEKVIKKFKVALDIVYNPLETKFLKMAKDNGLKTVDGLFMLVGQGVKAEEIWNGIKVDKSTEENIYEELKC 269 The following BLAST results are available for this feature:
BLAST of CN191732 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 265
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN191732 ID=CN191732; Name=CN191732; organism=Citrus sinensis; type=EST; length=880bpback to top |