CN191732
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: AROE_HALLT (Shikimate dehydrogenase OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=aroE PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.315e-17 Identity = 74/221 (33.48%), Postives = 100/221 (45.25%), Query Frame = -2 Query: 190 AGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCI----IRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKE 840 AG + T+P K+ A+ D +A+ IGAVN + +R + G+NTD G A LAG+ VV+ A V +ANRT +RA +LA+ V G D +L N TS+GM + + TP+P L V DAVY P TRLLREA +GAT + G M + Q E +E +TG AP E Sbjct: 56 AGLNVTVPFKQDALDAVDPAP-LAERIGAVNTVDFGPLRAGDADRPRGHNTDAAGVKRAFSHH-----------DIELAGRDAVVVGAGGAGRAAAFALADAGATVHVANRTAERAVDLADAVPGATGGGLDDLGDRIAGADVLVNATSVGMD-EPEATPVPADHLHGDLAVLDAVYAPIETRLLREAAAAGATTIDGAWMLLFQGVEAFEIWTGADAPVE 263
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: AROE_MAGSM (Shikimate dehydrogenase OS=Magnetococcus sp. (strain MC-1) GN=aroE PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.948e-17 Identity = 70/243 (28.81%), Postives = 110/243 (45.27%), Query Frame = -2 Query: 181 IAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRTYDRARELAETVGGHA------LSLADLENFNPEDGMILANTTSIGMQ----PKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQ 879 + + Q +++ GF+ TIPHKE + + A IGAVN ++ DGK+ G+NTD G I+ +++ R L+ + G ++ RV+IANRT +RA+ L E + +A ++ + E +L NTTS+G++ P +D +P H+A V D VY T LLR + GL M I Q + +E +TG P EL + Sbjct: 54 LVRAVQGFAAMGMRGFNATIPHKENLLPLMHTLSEEASHIGAVNTVVI-DDDGKMTGHNTDAYGFITGLKEAWRSDLSGLTAIMLGSGGAARAILYGLIQAKAA---------RVIIANRTIERAQALIEAMQPYAPNTQLMVAPTQADQLPLESCDLLINTTSMGLKGETIPYIDLARLP-----HHAFVSDIVYGAHPTPLLRATAQHQLGGQDGLPMLIHQGAKAFELWTGHSMPVELVE 281
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: YDIB_SHIF8 (Quinate/shikimate dehydrogenase OS=Shigella flexneri serotype 5b (strain 8401) GN=ydiB PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.735e-17 Identity = 70/240 (29.17%), Postives = 117/240 (48.75%), Query Frame = -2 Query: 172 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDG---LRGRLNV---SGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRT---YDRARELAETVGGHA------LSLADLENFNPE--DGMILANTTSIGMQPKVDETPIPKHALGHYAL-VFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIM 837 G ++P+K+ A + DE+ AK +GA+N I+ DG L GYNTD G I AI++ ++G+ V +GG S+A+ + + + + NR +D+A A+ V + LAD + F IL N T +GM+P +E+ + +L H L V + VY P +T+LL++A+++G + G M + Q EQ+ +TG P E +++M Sbjct: 24 GTGVSMPNKQLACEYVDELTPAAKLVGAINTIVN--DDGYLRGYNTDGTGHIRAIKESGFDIKGKTMVLLGAGGASTAIGAQGAI----------------EGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTDTDLADQQAFAEALASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYNPHMTKLLQQAQQAGCKTIDGYGMLLWQGAEQFTLWTGKDFPLEYVKQVM 245
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: YDIB_SHIBS (Quinate/shikimate dehydrogenase OS=Shigella boydii serotype 4 (strain Sb227) GN=ydiB PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.735e-17 Identity = 70/240 (29.17%), Postives = 117/240 (48.75%), Query Frame = -2 Query: 172 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDG---LRGRLNV---SGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRT---YDRARELAETVGGHA------LSLADLENFNPE--DGMILANTTSIGMQPKVDETPIPKHALGHYAL-VFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIM 837 G ++P+K+ A + DE+ AK +GA+N I+ DG L GYNTD G I AI++ ++G+ V +GG S+A+ + + + + NR +D+A A+ V + LAD + F IL N T +GM+P +E+ + +L H L V + VY P +T+LL++A+++G + G M + Q EQ+ +TG P E +++M Sbjct: 63 GTGVSMPNKQLACEYVDELTPAAKLVGAINTIVN--DDGYLRGYNTDGTGHIRAIKESGFDIKGKTMVLLGAGGASTAIGAQGAI----------------EGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYNPHMTKLLQQAQQAGCKTIDGYGMLLWQGAEQFTLWTGKDFPLEYVKQVM 284
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: YDIB_SHIB3 (Quinate/shikimate dehydrogenase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=ydiB PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.735e-17 Identity = 70/240 (29.17%), Postives = 117/240 (48.75%), Query Frame = -2 Query: 172 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDG---LRGRLNV---SGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRT---YDRARELAETVGGHA------LSLADLENFNPE--DGMILANTTSIGMQPKVDETPIPKHALGHYAL-VFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIM 837 G ++P+K+ A + DE+ AK +GA+N I+ DG L GYNTD G I AI++ ++G+ V +GG S+A+ + + + + NR +D+A A+ V + LAD + F IL N T +GM+P +E+ + +L H L V + VY P +T+LL++A+++G + G M + Q EQ+ +TG P E +++M Sbjct: 63 GTGVSMPNKQLACEYVDELTPAAKLVGAINTIVN--DDGYLRGYNTDGTGHIRAIKESGFDIKGKTMVLLGAGGASTAIGAQGAI----------------EGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYNPHMTKLLQQAQQAGCKTIDGYGMLLWQGAEQFTLWTGKDFPLEYVKQVM 284
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: YDIB_ECOUT (Quinate/shikimate dehydrogenase OS=Escherichia coli (strain UTI89 / UPEC) GN=ydiB PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.735e-17 Identity = 70/240 (29.17%), Postives = 117/240 (48.75%), Query Frame = -2 Query: 172 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDG---LRGRLNV---SGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRT---YDRARELAETVGGHA------LSLADLENFNPE--DGMILANTTSIGMQPKVDETPIPKHALGHYAL-VFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIM 837 G ++P+K+ A + DE+ AK +GA+N I+ DG L GYNTD G I AI++ ++G+ V +GG S+A+ + + + + NR +D+A A+ V + LAD + F IL N T +GM+P +E+ + +L H L V + VY P +T+LL++A+++G + G M + Q EQ+ +TG P E +++M Sbjct: 63 GTGVSMPNKQLACEYVDELTPAAKLVGAINTIVN--DDGYLRGYNTDGTGHIRAIKESGFDIKGKTMVLLGAGGASTAIGAQGAI----------------EGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYNPHMTKLLQQAQQAGCKTIDGYGMLLWQGAEQFTLWTGKDFPLEYVKQVM 284
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: YDIB_ECOSM (Quinate/shikimate dehydrogenase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=ydiB PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.735e-17 Identity = 70/240 (29.17%), Postives = 117/240 (48.75%), Query Frame = -2 Query: 172 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDG---LRGRLNV---SGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRT---YDRARELAETVGGHA------LSLADLENFNPE--DGMILANTTSIGMQPKVDETPIPKHALGHYAL-VFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIM 837 G ++P+K+ A + DE+ AK +GA+N I+ DG L GYNTD G I AI++ ++G+ V +GG S+A+ + + + + NR +D+A A+ V + LAD + F IL N T +GM+P +E+ + +L H L V + VY P +T+LL++A+++G + G M + Q EQ+ +TG P E +++M Sbjct: 63 GTGVSMPNKQLACEYVDELTPAAKLVGAINTIVN--DDGYLRGYNTDGTGHIRAIKESGFDIKGKTMVLLGAGGASTAIGAQGAI----------------EGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILTNGTKVGMKPLENESLVHDISLLHPGLLVTECVYNPHMTKLLQQAQQAGCKTIDGYGMLLWQGAEQFTLWTGKDFPLEYVKQVM 284
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: YDIB_ECOSE (Quinate/shikimate dehydrogenase OS=Escherichia coli (strain SE11) GN=ydiB PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.735e-17 Identity = 70/240 (29.17%), Postives = 117/240 (48.75%), Query Frame = -2 Query: 172 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDG---LRGRLNV---SGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRT---YDRARELAETVGGHA------LSLADLENFNPE--DGMILANTTSIGMQPKVDETPIPKHALGHYAL-VFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIM 837 G ++P+K+ A + DE+ AK +GA+N I+ DG L GYNTD G I AI++ ++G+ V +GG S+A+ + + + + NR +D+A A+ V + LAD + F IL N T +GM+P +E+ + +L H L V + VY P +T+LL++A+++G + G M + Q EQ+ +TG P E +++M Sbjct: 63 GTGISMPNKQLACEYVDELTPAAKLVGAINTIVN--DDGYLRGYNTDGTGHIRAIKESGFDIKGKTMVLLGAGGASTAIGAQGAI----------------EGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYNPHMTKLLQQAQQAGCKTIDGYGMLLWQGAEQFTLWTGKDFPLEYVKQVM 284
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: YDIB_ECOLU (Quinate/shikimate dehydrogenase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=ydiB PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.735e-17 Identity = 70/240 (29.17%), Postives = 117/240 (48.75%), Query Frame = -2 Query: 172 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDG---LRGRLNV---SGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRT---YDRARELAETVGGHA------LSLADLENFNPE--DGMILANTTSIGMQPKVDETPIPKHALGHYAL-VFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIM 837 G ++P+K+ A + DE+ AK +GA+N I+ DG L GYNTD G I AI++ ++G+ V +GG S+A+ + + + + NR +D+A A+ V + LAD + F IL N T +GM+P +E+ + +L H L V + VY P +T+LL++A+++G + G M + Q EQ+ +TG P E +++M Sbjct: 63 GTGVSMPNKQLACEYVDELTPAAKLVGAINTIVN--DDGYLRGYNTDGTGHIRAIKESGFDIKGKTMVLLGAGGASTAIGAQGAI----------------EGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYNPHMTKLLQQAQQAGCKTIDGYGMLLWQGAEQFTLWTGKDFPLEYVKQVM 284
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: YDIB_ECOLI (Quinate/shikimate dehydrogenase OS=Escherichia coli (strain K12) GN=ydiB PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.735e-17 Identity = 70/240 (29.17%), Postives = 117/240 (48.75%), Query Frame = -2 Query: 172 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDG---LRGRLNV---SGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRT---YDRARELAETVGGHA------LSLADLENFNPE--DGMILANTTSIGMQPKVDETPIPKHALGHYAL-VFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIM 837 G ++P+K+ A + DE+ AK +GA+N I+ DG L GYNTD G I AI++ ++G+ V +GG S+A+ + + + + NR +D+A A+ V + LAD + F IL N T +GM+P +E+ + +L H L V + VY P +T+LL++A+++G + G M + Q EQ+ +TG P E +++M Sbjct: 63 GTGVSMPNKQLACEYVDELTPAAKLVGAINTIVN--DDGYLRGYNTDGTGHIRAIKESGFDIKGKTMVLLGAGGASTAIGAQGAI----------------EGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYNPHMTKLLQQAQQAGCKTIDGYGMLLWQGAEQFTLWTGKDFPLEYVKQVM 284 The following BLAST results are available for this feature:
BLAST of CN191732 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 265
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Sequences
The
following sequences are available for this feature:
EST sequence >CN191732 ID=CN191732; Name=CN191732; organism=Citrus sinensis; type=EST; length=880bpback to top |